RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-217	ENST00000461350	ADAMTS7	Q9UKP4	1686 aa		13.87	□□□□□ -0.19
COPS7B-217	ENST00000461350	HDAC1	Q13547	482 aa	Predicted RBP	13.86	□□□□□ -0.19
COPS7B-217	ENST00000461350	CABP4	P57796	275 aa		13.86	□□□□□ -0.19
COPS7B-217	ENST00000461350	PROSER3	Q2NL68	480 aa		13.86	□□□□□ -0.19
COPS7B-217	ENST00000461350	SIRT2	Q8IXJ6	389 aa		13.86	□□□□□ -0.19
COPS7B-217	ENST00000461350	HSP90AB1	P08238	724 aa	Known RBP	13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	GRPEL1	Q9HAV7	217 aa		13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	PCDH11X	Q9BZA7	1347 aa		13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	PCDH11Y	Q9BZA8	1340 aa		13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	COL16A1	Q07092	1604 aa	Predicted RBP	13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	PARP4	Q9UKK3	1724 aa	Known RBP	13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	HSP90AA1	P07900	732 aa	Known RBP	13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	CLCN1	P35523	988 aa		13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	LNPK	Q9C0E8	428 aa		13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	SOS1	Q07889	1333 aa	Predicted RBP	13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	KAT6B	Q8WYB5	2073 aa		13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	CACNA1F	O60840	1977 aa		13.85	□□□□□ -0.19
COPS7B-217	ENST00000461350	ZNF496	Q96IT1	587 aa	Predicted RBP	13.84	□□□□□ -0.19
COPS7B-217	ENST00000461350	SMC5	Q8IY18	1101 aa		13.84	□□□□□ -0.19
COPS7B-217	ENST00000461350	HOXB7	P09629	217 aa		13.84	□□□□□ -0.19
COPS7B-217	ENST00000461350	CHMP4B	Q9H444	224 aa	Known RBP	13.83	□□□□□ -0.2
COPS7B-217	ENST00000461350	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.83	□□□□□ -0.2
COPS7B-217	ENST00000461350	HEG1	Q9ULI3	1381 aa		13.83	□□□□□ -0.2
COPS7B-217	ENST00000461350	COL14A1	Q05707	1796 aa	Known RBP	13.83	□□□□□ -0.2
COPS7B-217	ENST00000461350	PIP4K2A	P48426	406 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-217	ENST00000461350	TTC5	Q8N0Z6	440 aa		13.82	□□□□□ -0.2
COPS7B-217	ENST00000461350	FOXD4L1	Q9NU39	408 aa		13.82	□□□□□ -0.2
COPS7B-217	ENST00000461350	CCT4	P50991	539 aa	Known RBP	13.82	□□□□□ -0.2
COPS7B-217	ENST00000461350	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-217	ENST00000461350	TRIM44	Q96DX7	344 aa	Predicted RBP	13.82	□□□□□ -0.2
COPS7B-217	ENST00000461350	PI4KAP2	A4QPH2	592 aa		13.81	□□□□□ -0.2
COPS7B-217	ENST00000461350	PI4KAP1	Q8N8J0	262 aa		13.81	□□□□□ -0.2
COPS7B-217	ENST00000461350	TNPO1	Q92973	898 aa	Known RBP	13.81	□□□□□ -0.2
COPS7B-217	ENST00000461350	GBP4	Q96PP9	640 aa		13.81	□□□□□ -0.2
COPS7B-217	ENST00000461350	DBF4	Q9UBU7	674 aa	Predicted RBP	13.81	□□□□□ -0.2
COPS7B-217	ENST00000461350	SHANK3	Q9BYB0	1731 aa		13.81	□□□□□ -0.2
COPS7B-217	ENST00000461350	USP16	Q9Y5T5	823 aa		13.81	□□□□□ -0.2
COPS7B-217	ENST00000461350	MYL6B	P14649	208 aa		13.8	□□□□□ -0.2
COPS7B-217	ENST00000461350	AIMP1	Q12904	312 aa	Known RBP	13.8	□□□□□ -0.2
COPS7B-217	ENST00000461350	C5	P01031	1676 aa		13.8	□□□□□ -0.2
COPS7B-217	ENST00000461350	MRC1	P22897	1456 aa		13.8	□□□□□ -0.2
COPS7B-217	ENST00000461350	PLEKHG2	Q9H7P9	1386 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	ESPN	B1AK53	854 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	RBM25	P49756	843 aa	Known RBP	13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	ATP10D	Q9P241	1426 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	PTCD1	O75127	700 aa	Known RBP	13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	NUCB1	Q02818	461 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	CEP85	Q6P2H3	762 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	CHD1L	Q86WJ1	897 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	ANKRD45	Q5TZF3	282 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	SNX21	Q969T3	373 aa		13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	ISY1	Q9ULR0	285 aa	Known RBP	13.79	□□□□□ -0.2
COPS7B-217	ENST00000461350	FMNL2	Q96PY5	1086 aa		13.78	□□□□□ -0.2
COPS7B-217	ENST00000461350	PDIA6	Q15084	440 aa		13.78	□□□□□ -0.2
COPS7B-217	ENST00000461350	NKX1-1	Q15270	411 aa	Predicted RBP	13.78	□□□□□ -0.2
COPS7B-217	ENST00000461350	GLIPR1L2	Q4G1C9	344 aa		13.78	□□□□□ -0.2
COPS7B-217	ENST00000461350	CCDC9	Q9Y3X0	531 aa	Known RBP	13.78	□□□□□ -0.2
COPS7B-217	ENST00000461350	ADCY9	O60503	1353 aa		13.78	□□□□□ -0.2
COPS7B-217	ENST00000461350	PLCH1	Q4KWH8	1693 aa		13.77	□□□□□ -0.2
COPS7B-217	ENST00000461350	APBB1	O00213	710 aa		13.77	□□□□□ -0.2
COPS7B-217	ENST00000461350	SNRPA1	P09661	255 aa	Known RBP	13.77	□□□□□ -0.2
COPS7B-217	ENST00000461350	ANKRD44	Q8N8A2	993 aa		13.77	□□□□□ -0.2
COPS7B-217	ENST00000461350	DNAAF4	Q8WXU2	420 aa		13.77	□□□□□ -0.2
COPS7B-217	ENST00000461350	ERVV-2	B6SEH9	535 aa		13.77	□□□□□ -0.21
COPS7B-217	ENST00000461350	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.77	□□□□□ -0.21
COPS7B-217	ENST00000461350	CHMP4A	Q9BY43	222 aa		13.77	□□□□□ -0.21
COPS7B-217	ENST00000461350	USP44	Q9H0E7	712 aa		13.77	□□□□□ -0.21
COPS7B-217	ENST00000461350	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
COPS7B-217	ENST00000461350	MAP3K2	Q9Y2U5	619 aa		13.77	□□□□□ -0.21
COPS7B-217	ENST00000461350	DDIT3	P35638	169 aa		13.76	□□□□□ -0.21
COPS7B-217	ENST00000461350	GAS2L3	Q86XJ1	694 aa		13.76	□□□□□ -0.21
COPS7B-217	ENST00000461350	SRCIN1	Q9C0H9	1055 aa		13.76	□□□□□ -0.21
COPS7B-217	ENST00000461350	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.76	□□□□□ -0.21
COPS7B-217	ENST00000461350	GNAI2	P04899	355 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	HYPK	Q9NX55	129 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	ERBB4	Q15303	1308 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	DISP2	A7MBM2	1401 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	TOGARAM1	Q9Y4F4	1720 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	RAB3GAP1	Q15042	981 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	BEND3	Q5T5X7	828 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	GCC1	Q96CN9	775 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	C8orf37	Q96NL8	207 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	TMOD3	Q9NYL9	352 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	LRRFIP2	Q9Y608	721 aa	Known RBP	13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	EXOC5	O00471	708 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	BMP2KL	Q5H9B9	411 aa		13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-217	ENST00000461350	CWF19L2	Q2TBE0	894 aa	Known RBP	13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	XAGE3	Q8WTP9	111 aa		13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	SYTL4	Q96C24	671 aa	Predicted RBP	13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350		A0A0G2JS52	829 aa		13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	GNAI3	P08754	354 aa		13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	COPS6	Q7L5N1	327 aa		13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	ASAP1	Q9ULH1	1129 aa		13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	SPATA31A1	Q5TZJ5	1347 aa		13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	GOLGA6L22	H0YM25	854 aa		13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	CD2BP2	O95400	341 aa	Known RBP	13.74	□□□□□ -0.21
COPS7B-217	ENST00000461350	UBTFL1	P0CB47	393 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms