RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
CCDC12-204ENST00000460035 ZNF521Q96K83 1311 aa14.13□□□□□ -0.15
CCDC12-204ENST00000460035 PRAMEF22A3QJZ6 481 aa14.12□□□□□ -0.15
CCDC12-204ENST00000460035 PHF14O94880 888 aa14.12□□□□□ -0.15
CCDC12-204ENST00000460035 CYP19A1P11511 503 aaPredicted RBP14.12□□□□□ -0.15
CCDC12-204ENST00000460035 SMIM5Q71RC9 77 aa14.12□□□□□ -0.15
CCDC12-204ENST00000460035 MBIPQ9NS73 344 aa14.12□□□□□ -0.15
CCDC12-204ENST00000460035 USP16Q9Y5T5 823 aa14.12□□□□□ -0.15
CCDC12-204ENST00000460035 BCORQ6W2J9 1755 aa14.11□□□□□ -0.15
CCDC12-204ENST00000460035 GIGYF1O75420 1035 aaPredicted RBP14.11□□□□□ -0.15
CCDC12-204ENST00000460035 CANXP27824 592 aaKnown RBP14.11□□□□□ -0.15
CCDC12-204ENST00000460035 INTS5Q6P9B9 1019 aaKnown RBP14.11□□□□□ -0.15
CCDC12-204ENST00000460035 CCDC87Q9NVE4 849 aa14.11□□□□□ -0.15
CCDC12-204ENST00000460035 RTCBQ9Y3I0 505 aaKnown RBP14.11□□□□□ -0.15
CCDC12-204ENST00000460035 RPS6KA4O75676 772 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 A1BGP04217 495 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 TRAPPC3LQ5T215 181 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 COL23A1Q86Y22 540 aaPredicted RBP14.1□□□□□ -0.15
CCDC12-204ENST00000460035 FLAD1Q8NFF5 587 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 PDGFDQ9GZP0 370 aaPredicted RBP14.1□□□□□ -0.15
CCDC12-204ENST00000460035 LRP5O75197 1615 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 NUP98P52948 1817 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 SCN7AQ01118 1682 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 PNPLA7Q6ZV29 1317 aa14.1□□□□□ -0.15
CCDC12-204ENST00000460035 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.09□□□□□ -0.15
CCDC12-204ENST00000460035 EIF2S2P20042 333 aaKnown RBP14.09□□□□□ -0.15
CCDC12-204ENST00000460035 SSFA2P28290 1259 aa14.09□□□□□ -0.15
CCDC12-204ENST00000460035 TSR2Q969E8 191 aaKnown RBP14.09□□□□□ -0.15
CCDC12-204ENST00000460035 ZNF330Q9Y3S2 320 aaPredicted RBP14.09□□□□□ -0.15
CCDC12-204ENST00000460035 ELL2O00472 640 aaPredicted RBP14.08□□□□□ -0.16
CCDC12-204ENST00000460035 HOXB7P09629 217 aa14.08□□□□□ -0.16
CCDC12-204ENST00000460035 ADRA2BP18089 450 aa14.08□□□□□ -0.16
CCDC12-204ENST00000460035 HNRNPUQ00839 825 aaKnown RBP eCLIP14.08□□□□□ -0.163e-6■□□□□ 9.8
CCDC12-204ENST00000460035 KRT24Q2M2I5 525 aa14.08□□□□□ -0.16
CCDC12-204ENST00000460035 NPM2Q86SE8 214 aaKnown RBP14.08□□□□□ -0.16
CCDC12-204ENST00000460035 AMIGO3Q86WK7 504 aa14.08□□□□□ -0.16
CCDC12-204ENST00000460035 ARXQ96QS3 562 aa14.08□□□□□ -0.16
CCDC12-204ENST00000460035 ZBTB1Q9Y2K1 713 aa14.08□□□□□ -0.16
CCDC12-204ENST00000460035 ZBTB7AO95365 584 aa14.07□□□□□ -0.16
CCDC12-204ENST00000460035 PIP4K2AP48426 406 aaPredicted RBP14.07□□□□□ -0.16
CCDC12-204ENST00000460035 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
CCDC12-204ENST00000460035 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
CCDC12-204ENST00000460035 NECTIN2Q92692 538 aa14.07□□□□□ -0.16
CCDC12-204ENST00000460035 ARHGEF1Q92888 912 aaKnown RBP14.07□□□□□ -0.16
CCDC12-204ENST00000460035 SOS1Q07889 1333 aaPredicted RBP14.07□□□□□ -0.16
CCDC12-204ENST00000460035 RFC4P35249 363 aa14.06□□□□□ -0.16
CCDC12-204ENST00000460035 MYH16Q9H6N6 1097 aa14.06□□□□□ -0.16
CCDC12-204ENST00000460035 ATF5Q9Y2D1 282 aaPredicted RBP14.06□□□□□ -0.16
CCDC12-204ENST00000460035 ERBB4Q15303 1308 aa14.06□□□□□ -0.16
CCDC12-204ENST00000460035 ANKRD36CQ5JPF3 1778 aa14.06□□□□□ -0.16
CCDC12-204ENST00000460035 C8orf58Q8NAV2 365 aa14.05□□□□□ -0.16
CCDC12-204ENST00000460035 SLC16A10Q8TF71 515 aa14.05□□□□□ -0.16
CCDC12-204ENST00000460035 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
CCDC12-204ENST00000460035 FANCIQ9NVI1 1328 aa14.05□□□□□ -0.16
CCDC12-204ENST00000460035 COL15A1P39059 1388 aa14.05□□□□□ -0.16
CCDC12-204ENST00000460035 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
CCDC12-204ENST00000460035 MYL6BP14649 208 aa14.04□□□□□ -0.16
CCDC12-204ENST00000460035 IL6STP40189 918 aaPredicted RBP14.04□□□□□ -0.16
CCDC12-204ENST00000460035 EIF5P55010 431 aaKnown RBP14.04□□□□□ -0.16
CCDC12-204ENST00000460035 A0A087WZG4 1122 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 NBPF26B4DH59 902 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 ZPR1O75312 459 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 EXOSC9Q06265 439 aaKnown RBP14.03□□□□□ -0.16
CCDC12-204ENST00000460035 HDGFL1Q5TGJ6 251 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 MSL1Q68DK7 614 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 NBPF10Q6P3W6 841 aaKnown RBP14.03□□□□□ -0.16
CCDC12-204ENST00000460035 NBPF15Q8N660 670 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 CDCA7LQ96GN5 454 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 SPON1Q9HCB6 807 aa14.03□□□□□ -0.16
CCDC12-204ENST00000460035 E9PSI1 815 aa14.02□□□□□ -0.17
CCDC12-204ENST00000460035 TSPYL6Q8N831 410 aa14.02□□□□□ -0.17
CCDC12-204ENST00000460035 SRP68Q9UHB9 627 aaKnown RBP14.02□□□□□ -0.17
CCDC12-204ENST00000460035 TBC1D2BQ9UPU7 963 aa14.02□□□□□ -0.17
CCDC12-204ENST00000460035 KIF13BQ9NQT8 1826 aa14.01□□□□□ -0.17
CCDC12-204ENST00000460035 ARFGEF2Q9Y6D5 1785 aa14.01□□□□□ -0.17
CCDC12-204ENST00000460035 USP42Q9H9J4 1324 aaKnown RBP14.01□□□□□ -0.17
CCDC12-204ENST00000460035 ANXA1P04083 346 aa14.01□□□□□ -0.17
CCDC12-204ENST00000460035 SLFN5Q08AF3 891 aa14.01□□□□□ -0.17
CCDC12-204ENST00000460035 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
CCDC12-204ENST00000460035 ZBED9Q6R2W3 1325 aa14□□□□□ -0.17
CCDC12-204ENST00000460035 PDIA6Q15084 440 aa14□□□□□ -0.17
CCDC12-204ENST00000460035 USPL1Q5W0Q7 1092 aa14□□□□□ -0.17
CCDC12-204ENST00000460035 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
CCDC12-204ENST00000460035 TRMT2AQ8IZ69 625 aaKnown RBP14□□□□□ -0.17
CCDC12-204ENST00000460035 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
CCDC12-204ENST00000460035 NARFQ9UHQ1 456 aa14□□□□□ -0.17
CCDC12-204ENST00000460035 NRXN2Q9P2S2 1712 aa14□□□□□ -0.17
CCDC12-204ENST00000460035 TCERG1O14776 1098 aaKnown RBP13.99□□□□□ -0.17
CCDC12-204ENST00000460035 POLD1P28340 1107 aa13.99□□□□□ -0.17
CCDC12-204ENST00000460035 PROSER3Q2NL68 480 aa13.99□□□□□ -0.17
CCDC12-204ENST00000460035 CCDC30Q5VVM6 783 aa13.99□□□□□ -0.17
CCDC12-204ENST00000460035 LRP10Q7Z4F1 713 aa13.99□□□□□ -0.17
CCDC12-204ENST00000460035 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
CCDC12-204ENST00000460035 DDX21Q9NR30 783 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC12-204ENST00000460035 CHPF2Q9P2E5 772 aa13.99□□□□□ -0.17
CCDC12-204ENST00000460035 DBF4Q9UBU7 674 aaPredicted RBP13.99□□□□□ -0.17
CCDC12-204ENST00000460035 RGL2O15211 777 aa13.98□□□□□ -0.17
CCDC12-204ENST00000460035 GYS1P13807 737 aa13.98□□□□□ -0.17
CCDC12-204ENST00000460035 AIMP1Q12904 312 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms