RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 FMNL2Q96PY5 1086 aa23.18■■□□□ 1.3
SCARNA2-201ENST00000458748 MCM10Q7L590 875 aa23.16■■□□□ 1.3
SCARNA2-201ENST00000458748 PARP3Q9Y6F1 533 aa23.16■■□□□ 1.3
SCARNA2-201ENST00000458748 GOLGB1Q14789 3259 aaKnown RBP23.16■■□□□ 1.3
SCARNA2-201ENST00000458748 DLG5Q8TDM6 1919 aa23.16■■□□□ 1.3
SCARNA2-201ENST00000458748 ZPR1O75312 459 aa23.15■■□□□ 1.3
SCARNA2-201ENST00000458748 WDR43Q15061 677 aaKnown RBP eCLIP23.15■■□□□ 1.3not detected■□□□□ 10.3
SCARNA2-201ENST00000458748 NFE2L2Q16236 605 aa23.15■■□□□ 1.3
SCARNA2-201ENST00000458748 PLEKHF1Q96S99 279 aa23.15■■□□□ 1.3
SCARNA2-201ENST00000458748 PRKRIP1Q9H875 184 aaPredicted RBP23.15■■□□□ 1.3
SCARNA2-201ENST00000458748 ZBTB1Q9Y2K1 713 aa23.15■■□□□ 1.3
SCARNA2-201ENST00000458748 SRP68Q9UHB9 627 aaKnown RBP23.14■■□□□ 1.29
SCARNA2-201ENST00000458748 COL15A1P39059 1388 aa23.14■■□□□ 1.29
SCARNA2-201ENST00000458748 TGFB2P61812 414 aa23.13■■□□□ 1.29
SCARNA2-201ENST00000458748 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
SCARNA2-201ENST00000458748 PNISRQ8TF01 805 aaKnown RBP23.13■■□□□ 1.29
SCARNA2-201ENST00000458748 NARFQ9UHQ1 456 aa23.13■■□□□ 1.29
SCARNA2-201ENST00000458748 ZNF316A6NFI3 1004 aaPredicted RBP23.12■■□□□ 1.29
SCARNA2-201ENST00000458748 C1QTNF8P60827 252 aa23.12■■□□□ 1.29
SCARNA2-201ENST00000458748 FKBP8Q14318 412 aa23.12■■□□□ 1.29
SCARNA2-201ENST00000458748 TAF7Q15545 349 aaPredicted RBP23.12■■□□□ 1.29
SCARNA2-201ENST00000458748 C10orf71Q711Q0 1435 aa23.12■■□□□ 1.29
SCARNA2-201ENST00000458748 A0A087WZG4 1122 aa23.11■■□□□ 1.29
SCARNA2-201ENST00000458748 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
SCARNA2-201ENST00000458748 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
SCARNA2-201ENST00000458748 LMOD3Q0VAK6 560 aa23.1■■□□□ 1.29
SCARNA2-201ENST00000458748 DCTN1Q14203 1278 aa23.1■■□□□ 1.29
SCARNA2-201ENST00000458748 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
SCARNA2-201ENST00000458748 KIAA1551Q9HCM1 1747 aa23.09■■□□□ 1.29
SCARNA2-201ENST00000458748 KCNQ3O43525 872 aa23.09■■□□□ 1.29
SCARNA2-201ENST00000458748 GIGYF1O75420 1035 aaPredicted RBP23.09■■□□□ 1.29
SCARNA2-201ENST00000458748 TM4SF1P30408 202 aa23.09■■□□□ 1.29
SCARNA2-201ENST00000458748 PXDNLA1KZ92 1463 aa23.08■■□□□ 1.29
SCARNA2-201ENST00000458748 ATP10DQ9P241 1426 aa23.08■■□□□ 1.28
SCARNA2-201ENST00000458748 N4BP2Q86UW6 1770 aaPredicted RBP23.07■■□□□ 1.28
SCARNA2-201ENST00000458748 SNRPA1P09661 255 aaKnown RBP23.07■■□□□ 1.28
SCARNA2-201ENST00000458748 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
SCARNA2-201ENST00000458748 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
SCARNA2-201ENST00000458748 DDR1Q08345 913 aa23.06■■□□□ 1.28
SCARNA2-201ENST00000458748 POLRMTO00411 1230 aaKnown RBP23.05■■□□□ 1.28
SCARNA2-201ENST00000458748 RIPK4P57078 832 aa23.05■■□□□ 1.28
SCARNA2-201ENST00000458748 A0A0G2JLW4 131 aa23.04■■□□□ 1.28
SCARNA2-201ENST00000458748 RUNDC1Q96C34 613 aa23.04■■□□□ 1.28
SCARNA2-201ENST00000458748 A1BGP04217 495 aa23.03■■□□□ 1.28
SCARNA2-201ENST00000458748 NFIXQ14938 502 aa23.03■■□□□ 1.28
SCARNA2-201ENST00000458748 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
SCARNA2-201ENST00000458748 USP16Q9Y5T5 823 aa23.03■■□□□ 1.28
SCARNA2-201ENST00000458748 KDM3BQ7LBC6 1761 aa23.03■■□□□ 1.28
SCARNA2-201ENST00000458748 AFDNP55196 1824 aaKnown RBP23.03■■□□□ 1.28
SCARNA2-201ENST00000458748 BRCA1P38398 1863 aaKnown RBP23.02■■□□□ 1.28
SCARNA2-201ENST00000458748 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
SCARNA2-201ENST00000458748 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
SCARNA2-201ENST00000458748 SCN7AQ01118 1682 aa23.02■■□□□ 1.28
SCARNA2-201ENST00000458748 ADCY9O60503 1353 aa23.01■■□□□ 1.27
SCARNA2-201ENST00000458748 DPEP1P16444 411 aa23.01■■□□□ 1.27
SCARNA2-201ENST00000458748 ZNF526Q8TF50 670 aaPredicted RBP23.01■■□□□ 1.27
SCARNA2-201ENST00000458748 BCS1LQ9Y276 419 aa23.01■■□□□ 1.27
SCARNA2-201ENST00000458748 ZNF330Q9Y3S2 320 aaPredicted RBP23.01■■□□□ 1.27
SCARNA2-201ENST00000458748 BABAM1Q9NWV8 329 aa23■■□□□ 1.27
SCARNA2-201ENST00000458748 ADAMTS8Q9UP79 889 aa23■■□□□ 1.27
SCARNA2-201ENST00000458748 LAMB4A4D0S4 1761 aa22.99■■□□□ 1.27
SCARNA2-201ENST00000458748 CCDC146Q8IYE0 955 aa22.99■■□□□ 1.27
SCARNA2-201ENST00000458748 GPBP1L1Q9HC44 474 aaPredicted RBP22.99■■□□□ 1.27
SCARNA2-201ENST00000458748 MIS18AQ9NYP9 233 aa22.99■■□□□ 1.27
SCARNA2-201ENST00000458748 PRAMEF22A3QJZ6 481 aa22.98■■□□□ 1.27
SCARNA2-201ENST00000458748 ANP32CO43423 234 aa22.98■■□□□ 1.27
SCARNA2-201ENST00000458748 KCNA3P22001 575 aa22.98■■□□□ 1.27
SCARNA2-201ENST00000458748 TBC1D2BQ9UPU7 963 aa22.98■■□□□ 1.27
SCARNA2-201ENST00000458748 BCORQ6W2J9 1755 aa22.97■■□□□ 1.27
SCARNA2-201ENST00000458748 ARFGEF1Q9Y6D6 1849 aa22.97■■□□□ 1.27
SCARNA2-201ENST00000458748 SERPINB2P05120 415 aa22.97■■□□□ 1.27
SCARNA2-201ENST00000458748 NEUROD2Q15784 382 aa22.97■■□□□ 1.27
SCARNA2-201ENST00000458748 THUMPD2Q9BTF0 503 aaKnown RBP22.97■■□□□ 1.27
SCARNA2-201ENST00000458748 PIM2Q9P1W9 311 aa22.97■■□□□ 1.27
SCARNA2-201ENST00000458748 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
SCARNA2-201ENST00000458748 TSPYL4Q9UJ04 414 aa22.96■■□□□ 1.27
SCARNA2-201ENST00000458748 RGL2O15211 777 aa22.95■■□□□ 1.26
SCARNA2-201ENST00000458748 CAMTA2O94983 1202 aa22.95■■□□□ 1.26
SCARNA2-201ENST00000458748 EIF4A1P60842 406 aaKnown RBP22.95■■□□□ 1.26
SCARNA2-201ENST00000458748 TBC1D9BQ66K14 1250 aa22.94■■□□□ 1.26
SCARNA2-201ENST00000458748 CLEC4GQ6UXB4 293 aa22.94■■□□□ 1.26
SCARNA2-201ENST00000458748 RRP7AQ9Y3A4 280 aaKnown RBP22.94■■□□□ 1.26
SCARNA2-201ENST00000458748 CARMIL3Q8ND23 1372 aa22.93■■□□□ 1.26
SCARNA2-201ENST00000458748 BICDL1Q6ZP65 573 aa22.93■■□□□ 1.26
SCARNA2-201ENST00000458748 ARHGAP27Q6ZUM4 889 aa22.93■■□□□ 1.26
SCARNA2-201ENST00000458748 ZNF652Q9Y2D9 606 aa22.93■■□□□ 1.26
SCARNA2-201ENST00000458748 NBPF26B4DH59 902 aa22.92■■□□□ 1.26
SCARNA2-201ENST00000458748 DALRD3Q5D0E6 543 aaKnown RBP22.92■■□□□ 1.26
SCARNA2-201ENST00000458748 NBPF10Q6P3W6 841 aaKnown RBP22.92■■□□□ 1.26
SCARNA2-201ENST00000458748 NBPF15Q8N660 670 aa22.92■■□□□ 1.26
SCARNA2-201ENST00000458748 SETDB2Q96T68 719 aa22.92■■□□□ 1.26
SCARNA2-201ENST00000458748 DLEC1Q9Y238 1755 aa22.91■■□□□ 1.26
SCARNA2-201ENST00000458748 PIP4K2AP48426 406 aaPredicted RBP22.91■■□□□ 1.26
SCARNA2-201ENST00000458748 PDZRN3Q9UPQ7 1066 aa22.91■■□□□ 1.26
SCARNA2-201ENST00000458748 CHRNA5P30532 468 aa22.9■■□□□ 1.26
SCARNA2-201ENST00000458748 CALD1Q05682 793 aaKnown RBP22.9■■□□□ 1.26
SCARNA2-201ENST00000458748 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
SCARNA2-201ENST00000458748 NPHP1O15259 732 aa22.88■■□□□ 1.25
SCARNA2-201ENST00000458748 BRIP1Q9BX63 1249 aa22.88■■□□□ 1.25
SCARNA2-201ENST00000458748 H0YIN7 160 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms