RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 LRMPQ12912 555 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 ERC1Q8IUD2 1116 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 ZNF513Q8N8E2 541 aaPredicted RBP12.65□□□□□ -0.38
LINC00342-202ENST00000448494 GIMAP7Q8NHV1 300 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 CDC45O75419 566 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 MNAT1P51948 309 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 MTA1Q13330 715 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 ERCC6LQ2NKX8 1250 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
LINC00342-202ENST00000448494 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.38
LINC00342-202ENST00000448494 ADCY10Q96PN6 1610 aa12.64□□□□□ -0.39
LINC00342-202ENST00000448494 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
LINC00342-202ENST00000448494 ETAA1Q9NY74 926 aa12.64□□□□□ -0.39
LINC00342-202ENST00000448494 TNNQ9UQP3 1299 aa12.64□□□□□ -0.39
LINC00342-202ENST00000448494 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
LINC00342-202ENST00000448494 ADCY2Q08462 1091 aa12.64□□□□□ -0.39
LINC00342-202ENST00000448494 ARHGAP29Q52LW3 1261 aa12.64□□□□□ -0.39
LINC00342-202ENST00000448494 PRDM16Q9HAZ2 1276 aa12.64□□□□□ -0.39
LINC00342-202ENST00000448494 DMRT2Q9Y5R5 561 aa12.64□□□□□ -0.39
LINC00342-202ENST00000448494 COQ9O75208 318 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
LINC00342-202ENST00000448494 NEFHP12036 1026 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 ERCC4Q92889 916 aaPredicted RBP12.63□□□□□ -0.39
LINC00342-202ENST00000448494 TATDN2Q93075 761 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 DDX19BQ9UMR2 479 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 CCDC141Q6ZP82 1450 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 CARMIL1Q5VZK9 1371 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 TUBB4AP04350 444 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
LINC00342-202ENST00000448494 ZKSCAN2Q63HK3 967 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 USP48Q86UV5 1035 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 CCDC146Q8IYE0 955 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 TEX11Q8IYF3 940 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 DZIP1LQ8IYY4 767 aaKnown RBP12.63□□□□□ -0.39
LINC00342-202ENST00000448494 PDRG1Q9NUG6 133 aa12.63□□□□□ -0.39
LINC00342-202ENST00000448494 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 NAIF1Q69YI7 327 aaPredicted RBP12.62□□□□□ -0.39
LINC00342-202ENST00000448494 GBP6Q6ZN66 633 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 ANKRD23Q86SG2 305 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 ZCCHC17Q9NP64 241 aaKnown RBP12.62□□□□□ -0.39
LINC00342-202ENST00000448494 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
LINC00342-202ENST00000448494 NEBLO76041 1014 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 ELF1P32519 619 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 NEDD9Q14511 834 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 AP1ARQ63HQ0 302 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 RPS6KL1Q9Y6S9 549 aa12.62□□□□□ -0.39
LINC00342-202ENST00000448494 IPO8O15397 1037 aaKnown RBP12.61□□□□□ -0.39
LINC00342-202ENST00000448494 TBC1D8O95759 1140 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 CCDC192P0DO97 292 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 NUTM1Q86Y26 1132 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 TSPOAP1O95153 1857 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 ANKRD18BA2A2Z9 1011 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 GCFC2P16383 781 aaKnown RBP12.61□□□□□ -0.39
LINC00342-202ENST00000448494 CDC25BP30305 580 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 HNRNPH1P31943 449 aaKnown RBP12.61□□□□□ -0.39
LINC00342-202ENST00000448494 UBE2HP62256 183 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 TTC19Q6DKK2 380 aaPredicted RBP12.61□□□□□ -0.39
LINC00342-202ENST00000448494 MORC1Q86VD1 984 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 PLA2G4DQ86XP0 818 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 LNPKQ9C0E8 428 aa12.61□□□□□ -0.39
LINC00342-202ENST00000448494 MCM2P49736 904 aa12.6□□□□□ -0.39
LINC00342-202ENST00000448494 CCDC158Q5M9N0 1113 aa12.6□□□□□ -0.39
LINC00342-202ENST00000448494 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
LINC00342-202ENST00000448494 CACTINQ8WUQ7 758 aaKnown RBP12.6□□□□□ -0.39
LINC00342-202ENST00000448494 TMCO5BA8MYB1 307 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 NPHP1O15259 732 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 CLTCL1P53675 1640 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 CRYMQ14894 314 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 INTS4Q96HW7 963 aaKnown RBP12.59□□□□□ -0.39
LINC00342-202ENST00000448494 SH3GL3Q99963 347 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 VEZTQ9HBM0 779 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 TRAK1Q9UPV9 953 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC00342-202ENST00000448494 SMARCA5O60264 1052 aaPredicted RBP12.59□□□□□ -0.39
LINC00342-202ENST00000448494 ERLIN2O94905 339 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 ZNF75DP51815 510 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 ICA1Q05084 483 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 TRAF1Q13077 416 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 MICALL1Q8N3F8 863 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 UBXN4Q92575 508 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 LAMC1P11047 1609 aa12.59□□□□□ -0.39
LINC00342-202ENST00000448494 SASH3O75995 380 aa12.58□□□□□ -0.4
LINC00342-202ENST00000448494 GRIK3Q13003 919 aa12.58□□□□□ -0.4
LINC00342-202ENST00000448494 ANKRD45Q5TZF3 282 aa12.58□□□□□ -0.4
LINC00342-202ENST00000448494 SRRTQ9BXP5 876 aaKnown RBP12.58□□□□□ -0.4
LINC00342-202ENST00000448494 MCM8Q9UJA3 840 aa12.58□□□□□ -0.4
LINC00342-202ENST00000448494 CUL4AQ13619 759 aa12.58□□□□□ -0.4
LINC00342-202ENST00000448494 TPRNQ4KMQ1 711 aa12.58□□□□□ -0.4
LINC00342-202ENST00000448494 FOXD4L5Q5VV16 416 aaPredicted RBP12.58□□□□□ -0.4
LINC00342-202ENST00000448494 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
LINC00342-202ENST00000448494 CC2D1AQ6P1N0 951 aaPredicted RBP12.58□□□□□ -0.4
LINC00342-202ENST00000448494 FOXD4L4Q8WXT5 416 aaPredicted RBP12.58□□□□□ -0.4
LINC00342-202ENST00000448494 UTP14AQ9BVJ6 771 aaKnown RBP12.58□□□□□ -0.4
LINC00342-202ENST00000448494 TRIM6Q9C030 488 aaPredicted RBP12.58□□□□□ -0.4
LINC00342-202ENST00000448494 CLIP2Q9UDT6 1046 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms