RNA–Protein interactions for RNA: ENST00000447609.5

LMO3-209, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-209ENST00000447609 CWC22Q9HCG8 908 aaKnown RBP6.64□□□□□ -1.35
LMO3-209ENST00000447609 PPP1R1BQ9UD71 204 aaPredicted RBP6.64□□□□□ -1.35
LMO3-209ENST00000447609 IFT172Q9UG01 1749 aa6.64□□□□□ -1.35
LMO3-209ENST00000447609 NWD1Q149M9 1564 aa6.64□□□□□ -1.35
LMO3-209ENST00000447609 XRN1Q8IZH2 1706 aaKnown RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 TRIM37O94972 964 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 HMGB2P26583 209 aaKnown RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 HDAC1Q13547 482 aaPredicted RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 MVPQ14764 893 aaKnown RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 DIAPH3Q9NSV4 1193 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 CPSF1Q10570 1443 aaKnown RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 AATKQ6ZMQ8 1374 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 PCDH11XQ9BZA7 1347 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 PCDH11YQ9BZA8 1340 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 DCTN1Q14203 1278 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 MCM10Q7L590 875 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 GAS2L3Q86XJ1 694 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 THRAP3Q9Y2W1 955 aaKnown RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 BTBD11A6QL63 1104 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 DDIT3P35638 169 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 PRIM1P49642 420 aaKnown RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 DZIP1LQ8IYY4 767 aaKnown RBP6.63□□□□□ -1.35
LMO3-209ENST00000447609 MYRIPQ8NFW9 859 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 ROBO1Q9Y6N7 1651 aa6.63□□□□□ -1.35
LMO3-209ENST00000447609 USP31Q70CQ4 1352 aa6.62□□□□□ -1.35
LMO3-209ENST00000447609 SPDYE2BA6NHP3 402 aa6.62□□□□□ -1.35
LMO3-209ENST00000447609 IPO8O15397 1037 aaKnown RBP6.62□□□□□ -1.35
LMO3-209ENST00000447609 TPM3P06753 285 aa6.62□□□□□ -1.35
LMO3-209ENST00000447609 SPDYE6P0CI01 402 aa6.62□□□□□ -1.35
LMO3-209ENST00000447609 RARSP54136 660 aaKnown RBP6.62□□□□□ -1.35
LMO3-209ENST00000447609 SPDYE2Q495Y8 402 aa6.62□□□□□ -1.35
LMO3-209ENST00000447609 PDLIM2Q96JY6 352 aa6.62□□□□□ -1.35
LMO3-209ENST00000447609 PHLPP1O60346 1717 aa6.62□□□□□ -1.35
LMO3-209ENST00000447609 BAG4O95429 457 aaKnown RBP6.62□□□□□ -1.35
LMO3-209ENST00000447609 SMARCC1Q92922 1105 aaPredicted RBP6.62□□□□□ -1.35
LMO3-209ENST00000447609 THUMPD2Q9BTF0 503 aaKnown RBP6.62□□□□□ -1.35
LMO3-209ENST00000447609 CCDC66A2RUB6 948 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 GNAI1P63096 354 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 RABEP1Q15276 862 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 PDCL2Q8N4E4 241 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 BBXQ8WY36 941 aaPredicted RBP6.61□□□□□ -1.35
LMO3-209ENST00000447609 ZHX1Q9UKY1 873 aaPredicted RBP6.61□□□□□ -1.35
LMO3-209ENST00000447609 IL13P35225 146 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 TMPOP42166 694 aaKnown RBP6.61□□□□□ -1.35
LMO3-209ENST00000447609 AKAP4Q5JQC9 854 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 FAM184AQ8NB25 1140 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 KIF3AQ9Y496 699 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 PCDHB15Q9Y5E8 787 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 MTHFSDQ2M296 383 aaKnown RBP6.61□□□□□ -1.35
LMO3-209ENST00000447609 ZSCAN23Q3MJ62 389 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 PPP4R3BQ5MIZ7 849 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 CAVIN1Q6NZI2 390 aaKnown RBP6.61□□□□□ -1.35
LMO3-209ENST00000447609 CASC1Q6TDU7 716 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 WWC1Q8IX03 1113 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 DCAF5Q96JK2 942 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 AK7Q96M32 723 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 MIS18AQ9NYP9 233 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 RTL1A6NKG5 1358 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 NALCNQ8IZF0 1738 aa6.61□□□□□ -1.35
LMO3-209ENST00000447609 BMP2KLQ5H9B9 411 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 POTEAQ6S8J7 498 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 FNBP4Q8N3X1 1017 aaPredicted RBP6.6□□□□□ -1.35
LMO3-209ENST00000447609 KIF1AQ12756 1690 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 SPATA31A1Q5TZJ5 1347 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 CRB1P82279 1406 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 ITSN1Q15811 1721 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 ST18O60284 1047 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 AIMP1Q12904 312 aaKnown RBP6.6□□□□□ -1.35
LMO3-209ENST00000447609 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 NFATC2IPQ8NCF5 419 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 FEZ1Q99689 392 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 STK32BQ9NY57 414 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 KNDC1Q76NI1 1749 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 SPATA31A5Q5VU36 1347 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 SPATA31A7Q8IWB4 1347 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 STARD3NLO95772 234 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 ATP6V1AP38606 617 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 SLC39A6Q13433 755 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 TAF7Q15545 349 aaPredicted RBP6.6□□□□□ -1.35
LMO3-209ENST00000447609 CCDC27Q2M243 656 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 UVSSAQ2YD98 709 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 LRSAM1Q6UWE0 723 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 FBXO3Q9UK99 471 aa6.6□□□□□ -1.35
LMO3-209ENST00000447609 CCNL1Q9UK58 526 aaPredicted RBP6.59□□□□□ -1.35
LMO3-209ENST00000447609 SSH2Q76I76 1423 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 FMN2Q9NZ56 1722 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 KIF24Q5T7B8 1368 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 FAM177BA6PVY3 158 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 GOLGA6L6A8MZA4 724 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 FXR2P51116 673 aaKnown RBP eCLIP6.59□□□□□ -1.35
LMO3-209ENST00000447609 ZNF771Q7L3S4 317 aaPredicted RBP6.59□□□□□ -1.35
LMO3-209ENST00000447609 TSPYL1Q9H0U9 437 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 PRDM10Q9NQV6 1147 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 TFCP2L1Q9NZI6 479 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 SSUH2Q9Y2M2 353 aa6.59□□□□□ -1.35
LMO3-209ENST00000447609 SSFA2P28290 1259 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 GCC1Q96CN9 775 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 FMNL2Q96PY5 1086 aa6.58□□□□□ -1.36
LMO3-209ENST00000447609 TSPY26PQ9H489 355 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms