RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 PRPF40AO75400 957 aaKnown RBP12.71□□□□□ -0.38
TOP3B-210ENST00000444502 GLI2P10070 1586 aa12.71□□□□□ -0.38
TOP3B-210ENST00000444502 ZNF335Q9H4Z2 1342 aaPredicted RBP12.71□□□□□ -0.38
TOP3B-210ENST00000444502 LAMC1P11047 1609 aa12.71□□□□□ -0.38
TOP3B-210ENST00000444502 IL2RBP14784 551 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 CEP126Q9P2H0 1117 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 CAVIN1Q6NZI2 390 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 CWC27Q6UX04 472 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 SSFA2P28290 1259 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 TRMT112Q9UI30 125 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 NCBP3Q53F19 620 aaKnown RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 ZNF771Q7L3S4 317 aaPredicted RBP12.7□□□□□ -0.38
TOP3B-210ENST00000444502 PPP1R42Q7Z4L9 355 aa12.7□□□□□ -0.38
TOP3B-210ENST00000444502 ZPR1O75312 459 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 CBX1P83916 185 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 TRDNQ13061 729 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
TOP3B-210ENST00000444502 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
TOP3B-210ENST00000444502 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
TOP3B-210ENST00000444502 VPS37CA5D8V6 355 aaPredicted RBP12.68□□□□□ -0.38
TOP3B-210ENST00000444502 SNRPA1P09661 255 aaKnown RBP12.68□□□□□ -0.38
TOP3B-210ENST00000444502 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 LARP6Q9BRS8 491 aaKnown RBP12.68□□□□□ -0.38
TOP3B-210ENST00000444502 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 TULP4Q9NRJ4 1543 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 AKAP4Q5JQC9 854 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 CHMP4CQ96CF2 233 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 LMTK2Q8IWU2 1503 aa12.68□□□□□ -0.38
TOP3B-210ENST00000444502 DHX16O60231 1041 aaKnown RBP12.67□□□□□ -0.38
TOP3B-210ENST00000444502 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 H3BQV1 296 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 PDE1AP54750 535 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 IFFO2Q5TF58 517 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 CCDC8Q9H0W5 538 aaPredicted RBP12.67□□□□□ -0.38
TOP3B-210ENST00000444502 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 A2ML1A8K2U0 1454 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
TOP3B-210ENST00000444502 HYPKQ9NX55 129 aa12.67□□□□□ -0.38
TOP3B-210ENST00000444502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 CPLX1O14810 134 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 IGSF3O75054 1194 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RRP12Q5JTH9 1297 aaKnown RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RNF214Q8ND24 703 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 TBC1D2BQ9UPU7 963 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 IQGAP1P46940 1657 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 NFXL1Q6ZNB6 911 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ABCF2Q9UG63 623 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 METTL24Q5JXM2 366 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 VPS53Q5VIR6 699 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 KIF1BPQ96EK5 621 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 RASSF8Q8NHQ8 419 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 SIRT1Q96EB6 747 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 BOLA2Q9H3K6 86 aa12.66□□□□□ -0.38
TOP3B-210ENST00000444502 CGNQ9P2M7 1197 aaKnown RBP12.66□□□□□ -0.38
TOP3B-210ENST00000444502 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
TOP3B-210ENST00000444502 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
TOP3B-210ENST00000444502 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
TOP3B-210ENST00000444502 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
TOP3B-210ENST00000444502 SF3A1Q15459 793 aaKnown RBP12.65□□□□□ -0.38
TOP3B-210ENST00000444502 AMOTL1Q8IY63 956 aa12.65□□□□□ -0.38
TOP3B-210ENST00000444502 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 IDH1O75874 414 aaKnown RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 CHAF1AQ13111 956 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 SBNO1A3KN83 1393 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 AKAP17AQ02040 695 aaKnown RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 NPHP4O75161 1426 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-210ENST00000444502 ALKQ9UM73 1620 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
TOP3B-210ENST00000444502 ATP8B2P98198 1209 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
TOP3B-210ENST00000444502 IL17REQ8NFR9 667 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 ABCC4O15439 1325 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 CLSTN1O94985 981 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 ZNF853P0CG23 659 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 MPNDQ8N594 471 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 PIK3R4Q99570 1358 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 FAM135BQ49AJ0 1406 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 SETBP1Q9Y6X0 1596 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 SIRT2Q8IXJ6 389 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 AK7Q96M32 723 aa12.63□□□□□ -0.39
TOP3B-210ENST00000444502 IGHMBP2P38935 993 aaKnown RBP12.62□□□□□ -0.39
TOP3B-210ENST00000444502 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms