RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 POTEB3A0JP26 581 aa11.17□□□□□ -0.62
AC012494.1-201ENST00000439259 POTEBQ6S5H4 581 aa11.17□□□□□ -0.62
AC012494.1-201ENST00000439259 CCNL1Q9UK58 526 aaPredicted RBP11.17□□□□□ -0.62
AC012494.1-201ENST00000439259 KIF3CO14782 793 aa11.16□□□□□ -0.62
AC012494.1-201ENST00000439259 MPRIPQ6WCQ1 1025 aa11.16□□□□□ -0.62
AC012494.1-201ENST00000439259 KRTAP3-3Q9BYR6 98 aa11.16□□□□□ -0.62
AC012494.1-201ENST00000439259 KRTAP3-2Q9BYR7 98 aa11.16□□□□□ -0.62
AC012494.1-201ENST00000439259 TFCP2L1Q9NZI6 479 aa11.16□□□□□ -0.62
AC012494.1-201ENST00000439259 EIF4A2Q14240 407 aaKnown RBP11.15□□□□□ -0.62
AC012494.1-201ENST00000439259 GPR153Q6NV75 609 aa11.15□□□□□ -0.62
AC012494.1-201ENST00000439259 SYT17Q9BSW7 474 aa11.15□□□□□ -0.62
AC012494.1-201ENST00000439259 MAP2P11137 1827 aaKnown RBP11.14□□□□□ -0.63
AC012494.1-201ENST00000439259 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
AC012494.1-201ENST00000439259 ARXQ96QS3 562 aa11.14□□□□□ -0.63
AC012494.1-201ENST00000439259 NCAPD2Q15021 1401 aa11.14□□□□□ -0.63
AC012494.1-201ENST00000439259 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
AC012494.1-201ENST00000439259 LY75O60449 1722 aa11.13□□□□□ -0.63
AC012494.1-201ENST00000439259 YY1P25490 414 aa11.13□□□□□ -0.63
AC012494.1-201ENST00000439259 SMIM5Q71RC9 77 aa11.13□□□□□ -0.63
AC012494.1-201ENST00000439259 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
AC012494.1-201ENST00000439259 PIGBQ92521 554 aa11.13□□□□□ -0.63
AC012494.1-201ENST00000439259 SPG7Q9UQ90 795 aa11.13□□□□□ -0.63
AC012494.1-201ENST00000439259 PALLDQ8WX93 1383 aa11.13□□□□□ -0.63
AC012494.1-201ENST00000439259 TOGARAM1Q9Y4F4 1720 aa11.12□□□□□ -0.63
AC012494.1-201ENST00000439259 GOLGB1Q14789 3259 aaKnown RBP11.12□□□□□ -0.63
AC012494.1-201ENST00000439259 C2orf72A6NCS6 295 aa11.12□□□□□ -0.63
AC012494.1-201ENST00000439259 MORC1Q86VD1 984 aa11.12□□□□□ -0.63
AC012494.1-201ENST00000439259 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
AC012494.1-201ENST00000439259 RYDENQ9NUL5 291 aaKnown RBP11.12□□□□□ -0.63
AC012494.1-201ENST00000439259 TUBGCP6Q96RT7 1819 aa11.12□□□□□ -0.63
AC012494.1-201ENST00000439259 PHKG2P15735 406 aa11.11□□□□□ -0.63
AC012494.1-201ENST00000439259 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
AC012494.1-201ENST00000439259 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
AC012494.1-201ENST00000439259 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
AC012494.1-201ENST00000439259 AMIGO3Q86WK7 504 aa11.11□□□□□ -0.63
AC012494.1-201ENST00000439259 PKD1L3Q7Z443 1732 aa11.11□□□□□ -0.63
AC012494.1-201ENST00000439259 KIF7Q2M1P5 1343 aa11.1□□□□□ -0.63
AC012494.1-201ENST00000439259 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
AC012494.1-201ENST00000439259 IFNL2Q8IZJ0 200 aa11.1□□□□□ -0.63
AC012494.1-201ENST00000439259 SLC16A10Q8TF71 515 aa11.1□□□□□ -0.63
AC012494.1-201ENST00000439259 ASAP1Q9ULH1 1129 aa11.1□□□□□ -0.63
AC012494.1-201ENST00000439259 KNSTRNQ9Y448 316 aa11.1□□□□□ -0.63
AC012494.1-201ENST00000439259 IGSF1Q8N6C5 1336 aa11.09□□□□□ -0.63
AC012494.1-201ENST00000439259 SLC34A2O95436 690 aa11.09□□□□□ -0.63
AC012494.1-201ENST00000439259 POLD1P28340 1107 aa11.09□□□□□ -0.63
AC012494.1-201ENST00000439259 ITGB4P16144 1822 aa11.09□□□□□ -0.63
AC012494.1-201ENST00000439259 CNGB1Q14028 1251 aaPredicted RBP11.08□□□□□ -0.64
AC012494.1-201ENST00000439259 AMER1Q5JTC6 1135 aaPredicted RBP11.08□□□□□ -0.64
AC012494.1-201ENST00000439259 NLGN2Q8NFZ4 835 aa11.08□□□□□ -0.64
AC012494.1-201ENST00000439259 SMARCC1Q92922 1105 aaPredicted RBP11.08□□□□□ -0.64
AC012494.1-201ENST00000439259 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
AC012494.1-201ENST00000439259 QSER1Q2KHR3 1735 aa11.08□□□□□ -0.64
AC012494.1-201ENST00000439259 LOC102724428A0A0B4J2F2 783 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 PHF14O94880 888 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 SIK1P57059 783 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 ITPK1Q13572 414 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 ZNF687Q8N1G0 1237 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 LINC00116Q8NCU8 138 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 C5P01031 1676 aa11.07□□□□□ -0.64
AC012494.1-201ENST00000439259 CC2D1BQ5T0F9 858 aaKnown RBP11.06□□□□□ -0.64
AC012494.1-201ENST00000439259 SULT6B1Q6IMI4 303 aa11.06□□□□□ -0.64
AC012494.1-201ENST00000439259 ZNF530Q6P9A1 599 aaPredicted RBP11.06□□□□□ -0.64
AC012494.1-201ENST00000439259 AK7Q96M32 723 aa11.06□□□□□ -0.64
AC012494.1-201ENST00000439259 MAP3K5Q99683 1374 aa11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 C4BP0C0L5 1744 aa11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 IL13P35225 146 aa11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 GPR162Q16538 588 aa11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 PLEKHO1Q53GL0 409 aaPredicted RBP11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
AC012494.1-201ENST00000439259 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
AC012494.1-201ENST00000439259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
AC012494.1-201ENST00000439259 ZNF316A6NFI3 1004 aaPredicted RBP11.04□□□□□ -0.64
AC012494.1-201ENST00000439259 PPP1R37O75864 691 aa11.04□□□□□ -0.64
AC012494.1-201ENST00000439259 MTHFSP49914 203 aa11.04□□□□□ -0.64
AC012494.1-201ENST00000439259 KDM6AO15550 1401 aaPredicted RBP11.03□□□□□ -0.64
AC012494.1-201ENST00000439259 GNPATO15228 680 aa11.03□□□□□ -0.64
AC012494.1-201ENST00000439259 FLAD1Q8NFF5 587 aa11.03□□□□□ -0.64
AC012494.1-201ENST00000439259 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
AC012494.1-201ENST00000439259 ERVV-2B6SEH9 535 aa11.02□□□□□ -0.65
AC012494.1-201ENST00000439259 HMOX1P09601 288 aa11.02□□□□□ -0.65
AC012494.1-201ENST00000439259 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
AC012494.1-201ENST00000439259 AMOTQ4VCS5 1084 aa11.02□□□□□ -0.65
AC012494.1-201ENST00000439259 PTCD1O75127 700 aaKnown RBP11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 SSFA2P28290 1259 aa11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 CABP4P57796 275 aa11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 C1orf141Q5JVX7 400 aa11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 WWC3Q9ULE0 1092 aa11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 KDRP35968 1356 aa11.01□□□□□ -0.65
AC012494.1-201ENST00000439259 UBR3Q6ZT12 1888 aa11□□□□□ -0.65
AC012494.1-201ENST00000439259 LGR6Q9HBX8 967 aa11□□□□□ -0.65
AC012494.1-201ENST00000439259 PCDHGA4Q9Y5G9 962 aa11□□□□□ -0.65
AC012494.1-201ENST00000439259 PLEKHG2Q9H7P9 1386 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms