RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 POLRMTO00411 1230 aaKnown RBP16.32■□□□□ 0.2
RTN4-211ENST00000438462 NME9Q86XW9 330 aa16.32■□□□□ 0.2
RTN4-211ENST00000438462 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
RTN4-211ENST00000438462 KDRP35968 1356 aa16.31■□□□□ 0.2
RTN4-211ENST00000438462 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
RTN4-211ENST00000438462 HPS5Q9UPZ3 1129 aa16.31■□□□□ 0.2
RTN4-211ENST00000438462 MKI67P46013 3256 aaKnown RBP16.31■□□□□ 0.2
RTN4-211ENST00000438462 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
RTN4-211ENST00000438462 ZNF831Q5JPB2 1677 aa16.3■□□□□ 0.2
RTN4-211ENST00000438462 USHBP1Q8N6Y0 703 aa16.3■□□□□ 0.2
RTN4-211ENST00000438462 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
RTN4-211ENST00000438462 CYP27B1O15528 508 aa16.29■□□□□ 0.2
RTN4-211ENST00000438462 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
RTN4-211ENST00000438462 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
RTN4-211ENST00000438462 COL6A3P12111 3177 aa16.29■□□□□ 0.2
RTN4-211ENST00000438462 MYH14Q7Z406 1995 aaKnown RBP16.29■□□□□ 0.2
RTN4-211ENST00000438462 LTBP3Q9NS15 1303 aa16.28■□□□□ 0.2
RTN4-211ENST00000438462 CST9Q5W186 159 aa16.28■□□□□ 0.2
RTN4-211ENST00000438462 TAOK3Q9H2K8 898 aa16.28■□□□□ 0.2
RTN4-211ENST00000438462 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
RTN4-211ENST00000438462 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.2
RTN4-211ENST00000438462 USP42Q9H9J4 1324 aaKnown RBP16.27■□□□□ 0.2
RTN4-211ENST00000438462 RPS6KA4O75676 772 aa16.27■□□□□ 0.2
RTN4-211ENST00000438462 C2CD5Q86YS7 1000 aa16.27■□□□□ 0.2
RTN4-211ENST00000438462 SCN11AQ9UI33 1791 aa16.27■□□□□ 0.2
RTN4-211ENST00000438462 ZNF541Q9H0D2 1346 aa16.26■□□□□ 0.19
RTN4-211ENST00000438462 COL11A2P13942 1736 aaPredicted RBP16.26■□□□□ 0.19
RTN4-211ENST00000438462 C21orf2O43822 256 aa16.26■□□□□ 0.19
RTN4-211ENST00000438462 TATP17735 454 aaPredicted RBP16.26■□□□□ 0.19
RTN4-211ENST00000438462 MNX1P50219 401 aaPredicted RBP16.26■□□□□ 0.19
RTN4-211ENST00000438462 CTU1Q7Z7A3 348 aaKnown RBP16.26■□□□□ 0.19
RTN4-211ENST00000438462 COLQQ9Y215 455 aaPredicted RBP16.26■□□□□ 0.19
RTN4-211ENST00000438462 CACNA1SQ13698 1873 aa16.26■□□□□ 0.19
RTN4-211ENST00000438462 TRAF5O00463 557 aa16.24■□□□□ 0.19
RTN4-211ENST00000438462 HOXC9P31274 260 aa16.24■□□□□ 0.19
RTN4-211ENST00000438462 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
RTN4-211ENST00000438462 NBPF6Q5VWK0 638 aa16.24■□□□□ 0.19
RTN4-211ENST00000438462 NBPF4Q96M43 638 aa16.24■□□□□ 0.19
RTN4-211ENST00000438462 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
RTN4-211ENST00000438462 SAPCD2Q86UD0 394 aa16.23■□□□□ 0.19
RTN4-211ENST00000438462 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
RTN4-211ENST00000438462 CARMIL3Q8ND23 1372 aa16.23■□□□□ 0.19
RTN4-211ENST00000438462 MAP3K19Q56UN5 1328 aa16.22■□□□□ 0.19
RTN4-211ENST00000438462 TM4SF1P30408 202 aa16.22■□□□□ 0.19
RTN4-211ENST00000438462 ZIC5Q96T25 663 aa16.22■□□□□ 0.19
RTN4-211ENST00000438462 INSRP06213 1382 aa16.22■□□□□ 0.19
RTN4-211ENST00000438462 SBNO2Q9Y2G9 1366 aa16.22■□□□□ 0.19
RTN4-211ENST00000438462 EVC2Q86UK5 1308 aa16.21■□□□□ 0.19
RTN4-211ENST00000438462 ANKRD31Q8N7Z5 1873 aa16.21■□□□□ 0.19
RTN4-211ENST00000438462 H0YIN7 160 aa16.21■□□□□ 0.19
RTN4-211ENST00000438462 ATG3Q9NT62 314 aa16.21■□□□□ 0.19
RTN4-211ENST00000438462 STAC3Q96MF2 364 aa16.2■□□□□ 0.18
RTN4-211ENST00000438462 SAGE1Q9NXZ1 904 aa16.2■□□□□ 0.18
RTN4-211ENST00000438462 MPNDQ8N594 471 aa16.19■□□□□ 0.18
RTN4-211ENST00000438462 HHIPL1Q96JK4 782 aa16.19■□□□□ 0.18
RTN4-211ENST00000438462 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.18
RTN4-211ENST00000438462 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
RTN4-211ENST00000438462 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
RTN4-211ENST00000438462 AMPHP49418 695 aa16.17■□□□□ 0.18
RTN4-211ENST00000438462 NOGQ13253 232 aa16.17■□□□□ 0.18
RTN4-211ENST00000438462 TRIOBPQ9H2D6 2365 aa16.16■□□□□ 0.18
RTN4-211ENST00000438462 BCORQ6W2J9 1755 aa16.16■□□□□ 0.18
RTN4-211ENST00000438462 AKAP11Q9UKA4 1901 aa16.16■□□□□ 0.18
RTN4-211ENST00000438462 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
RTN4-211ENST00000438462 AKAP4Q5JQC9 854 aa16.16■□□□□ 0.18
RTN4-211ENST00000438462 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
RTN4-211ENST00000438462 SLX4Q8IY92 1834 aa16.16■□□□□ 0.18
RTN4-211ENST00000438462 CELF2O95319 508 aaKnown RBP16.15■□□□□ 0.18
RTN4-211ENST00000438462 NFIXQ14938 502 aa16.14■□□□□ 0.17
RTN4-211ENST00000438462 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
RTN4-211ENST00000438462 TRPA1O75762 1119 aa16.13■□□□□ 0.17
RTN4-211ENST00000438462 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
RTN4-211ENST00000438462 TJP1Q07157 1748 aa16.13■□□□□ 0.17
RTN4-211ENST00000438462 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
RTN4-211ENST00000438462 SERPINB2P05120 415 aa16.12■□□□□ 0.17
RTN4-211ENST00000438462 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
RTN4-211ENST00000438462 PKN2Q16513 984 aaKnown RBP16.12■□□□□ 0.17
RTN4-211ENST00000438462 RNF186Q9NXI6 227 aa16.12■□□□□ 0.17
RTN4-211ENST00000438462 PAPPA2Q9BXP8 1791 aa16.12■□□□□ 0.17
RTN4-211ENST00000438462 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
RTN4-211ENST00000438462 RBBP6Q7Z6E9 1792 aaKnown RBP16.11■□□□□ 0.17
RTN4-211ENST00000438462 FBLN1P23142 703 aa16.11■□□□□ 0.17
RTN4-211ENST00000438462 COL25A1Q9BXS0 654 aaPredicted RBP16.11■□□□□ 0.17
RTN4-211ENST00000438462 ZPR1O75312 459 aa16.09■□□□□ 0.17
RTN4-211ENST00000438462 GPC2Q8N158 579 aa16.09■□□□□ 0.17
RTN4-211ENST00000438462 ZNF408Q9H9D4 720 aa16.09■□□□□ 0.17
RTN4-211ENST00000438462 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.16
RTN4-211ENST00000438462 SOGA3Q5TF21 947 aa16.08■□□□□ 0.16
RTN4-211ENST00000438462 SYNE4Q8N205 404 aa16.08■□□□□ 0.16
RTN4-211ENST00000438462 UNC80Q8N2C7 3258 aa16.08■□□□□ 0.16
RTN4-211ENST00000438462 POTEFA5A3E0 1075 aa16.07■□□□□ 0.16
RTN4-211ENST00000438462 PRPF40BQ6NWY9 871 aaKnown RBP16.07■□□□□ 0.16
RTN4-211ENST00000438462 ZNF277Q9NRM2 450 aaPredicted RBP16.07■□□□□ 0.16
RTN4-211ENST00000438462 FZD9O00144 591 aa16.06■□□□□ 0.16
RTN4-211ENST00000438462 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
RTN4-211ENST00000438462 FAM155AB1AL88 458 aaPredicted RBP16.05■□□□□ 0.16
RTN4-211ENST00000438462 EPS15P42566 896 aa16.05■□□□□ 0.16
RTN4-211ENST00000438462 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
RTN4-211ENST00000438462 HDAC9Q9UKV0 1011 aa16.05■□□□□ 0.16
RTN4-211ENST00000438462 SCNN1DP51172 638 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms