RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
CALD1-208ENST00000435928 POLRMTO00411 1230 aaKnown RBP21.21■□□□□ 0.99
CALD1-208ENST00000435928 DLEC1Q9Y238 1755 aa21.2■□□□□ 0.99
CALD1-208ENST00000435928 DALRD3Q5D0E6 543 aaKnown RBP21.2■□□□□ 0.98
CALD1-208ENST00000435928 CNGB1Q14028 1251 aaPredicted RBP21.19■□□□□ 0.98
CALD1-208ENST00000435928 VSIG10Q8N0Z9 540 aa21.19■□□□□ 0.98
CALD1-208ENST00000435928 ZBTB1Q9Y2K1 713 aa21.19■□□□□ 0.98
CALD1-208ENST00000435928 SBF1O95248 1867 aa21.18■□□□□ 0.98
CALD1-208ENST00000435928 U2SURPO15042 1029 aaKnown RBP21.18■□□□□ 0.98
CALD1-208ENST00000435928 TM4SF1P30408 202 aa21.18■□□□□ 0.98
CALD1-208ENST00000435928 TTC5Q8N0Z6 440 aa21.18■□□□□ 0.98
CALD1-208ENST00000435928 CHRNA5P30532 468 aa21.17■□□□□ 0.98
CALD1-208ENST00000435928 NARFQ9UHQ1 456 aa21.17■□□□□ 0.98
CALD1-208ENST00000435928 SCN7AQ01118 1682 aa21.16■□□□□ 0.98
CALD1-208ENST00000435928 C9orf131Q5VYM1 1079 aa21.16■□□□□ 0.98
CALD1-208ENST00000435928 NFIXQ14938 502 aa21.15■□□□□ 0.98
CALD1-208ENST00000435928 GAS2L2Q8NHY3 880 aa21.15■□□□□ 0.98
CALD1-208ENST00000435928 TEFQ10587 303 aa21.14■□□□□ 0.97
CALD1-208ENST00000435928 TNRC6CQ9HCJ0 1690 aaKnown RBP21.14■□□□□ 0.97
CALD1-208ENST00000435928 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
CALD1-208ENST00000435928 TOMM70O94826 608 aa21.13■□□□□ 0.97
CALD1-208ENST00000435928 STARD3NLO95772 234 aa21.13■□□□□ 0.97
CALD1-208ENST00000435928 CANXP27824 592 aaKnown RBP21.13■□□□□ 0.97
CALD1-208ENST00000435928 NMRK2Q9NPI5 230 aa21.13■□□□□ 0.97
CALD1-208ENST00000435928 RNF181Q9P0P0 153 aa21.12■□□□□ 0.97
CALD1-208ENST00000435928 BCL2L12Q9HB09 334 aa21.11■□□□□ 0.97
CALD1-208ENST00000435928 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
CALD1-208ENST00000435928 SERPINB2P05120 415 aa21.1■□□□□ 0.97
CALD1-208ENST00000435928 ZNF790Q6PG37 636 aa21.1■□□□□ 0.97
CALD1-208ENST00000435928 IL17REQ8NFR9 667 aa21.1■□□□□ 0.97
CALD1-208ENST00000435928 ZNF496Q96IT1 587 aaPredicted RBP21.1■□□□□ 0.97
CALD1-208ENST00000435928 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
CALD1-208ENST00000435928 ANKRD31Q8N7Z5 1873 aa21.09■□□□□ 0.97
CALD1-208ENST00000435928 KDM2BQ8NHM5 1336 aa21.09■□□□□ 0.97
CALD1-208ENST00000435928 A0A087WZG4 1122 aa21.09■□□□□ 0.97
CALD1-208ENST00000435928 EIF5P55010 431 aaKnown RBP21.09■□□□□ 0.97
CALD1-208ENST00000435928 CFAP53Q96M91 514 aa21.09■□□□□ 0.97
CALD1-208ENST00000435928 WDR90Q96KV7 1748 aa21.09■□□□□ 0.97
CALD1-208ENST00000435928 CCDC88AQ3V6T2 1871 aa21.09■□□□□ 0.97
CALD1-208ENST00000435928 BCORQ6W2J9 1755 aa21.08■□□□□ 0.97
CALD1-208ENST00000435928 APLP1P51693 650 aa21.08■□□□□ 0.97
CALD1-208ENST00000435928 C16orf71Q8IYS4 520 aaPredicted RBP21.08■□□□□ 0.97
CALD1-208ENST00000435928 TEX13AQ9BXU3 409 aaPredicted RBP21.08■□□□□ 0.97
CALD1-208ENST00000435928 CARMIL3Q8ND23 1372 aa21.08■□□□□ 0.96
CALD1-208ENST00000435928 CEMIPQ8WUJ3 1361 aa21.08■□□□□ 0.96
CALD1-208ENST00000435928 BICDL1Q6ZP65 573 aa21.07■□□□□ 0.96
CALD1-208ENST00000435928 ZNF330Q9Y3S2 320 aaPredicted RBP21.07■□□□□ 0.96
CALD1-208ENST00000435928 COL11A2P13942 1736 aaPredicted RBP21.07■□□□□ 0.96
CALD1-208ENST00000435928 PRKAR2BP31323 418 aa21.06■□□□□ 0.96
CALD1-208ENST00000435928 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
CALD1-208ENST00000435928 RASSF7Q02833 373 aa21.05■□□□□ 0.96
CALD1-208ENST00000435928 C2CD5Q86YS7 1000 aa21.05■□□□□ 0.96
CALD1-208ENST00000435928 TTLL6Q8N841 843 aa21.05■□□□□ 0.96
CALD1-208ENST00000435928 RBM46Q8TBY0 533 aaKnown RBP21.05■□□□□ 0.96
CALD1-208ENST00000435928 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
CALD1-208ENST00000435928 ZC3H4Q9UPT8 1303 aaKnown RBP21.04■□□□□ 0.96
CALD1-208ENST00000435928 H0YIN7 160 aa21.04■□□□□ 0.96
CALD1-208ENST00000435928 PHACTR3Q96KR7 559 aa21.04■□□□□ 0.96
CALD1-208ENST00000435928 CACNA1SQ13698 1873 aa21.04■□□□□ 0.96
CALD1-208ENST00000435928 BTBD11A6QL63 1104 aa21.03■□□□□ 0.96
CALD1-208ENST00000435928 IL6STP40189 918 aaPredicted RBP21.03■□□□□ 0.96
CALD1-208ENST00000435928 TBC1D9BQ66K14 1250 aa21.03■□□□□ 0.96
CALD1-208ENST00000435928 NPM2Q86SE8 214 aaKnown RBP21.03■□□□□ 0.96
CALD1-208ENST00000435928 NUDCQ9Y266 331 aa21.03■□□□□ 0.96
CALD1-208ENST00000435928 LMNB1P20700 586 aa21.02■□□□□ 0.96
CALD1-208ENST00000435928 TBC1D2BQ9UPU7 963 aa21.02■□□□□ 0.96
CALD1-208ENST00000435928 IFFO2Q5TF58 517 aa21.01■□□□□ 0.95
CALD1-208ENST00000435928 A1BGP04217 495 aa21■□□□□ 0.95
CALD1-208ENST00000435928 U2AF1L5P0DN76 240 aaPredicted RBP21■□□□□ 0.95
CALD1-208ENST00000435928 U2AF1Q01081 240 aaKnown RBP eCLIP21■□□□□ 0.95
CALD1-208ENST00000435928 RRAGCQ9HB90 399 aa21■□□□□ 0.95
CALD1-208ENST00000435928 FER1L6Q2WGJ9 1857 aa21■□□□□ 0.95
CALD1-208ENST00000435928 ARFGEF2Q9Y6D5 1785 aa21■□□□□ 0.95
CALD1-208ENST00000435928 DICER1Q9UPY3 1922 aaKnown RBP21■□□□□ 0.95
CALD1-208ENST00000435928 KCNQ3O43525 872 aa20.99■□□□□ 0.95
CALD1-208ENST00000435928 PDE6BP35913 854 aa20.99■□□□□ 0.95
CALD1-208ENST00000435928 FSTL1Q12841 308 aa20.99■□□□□ 0.95
CALD1-208ENST00000435928 PRR5LQ6MZQ0 368 aa20.99■□□□□ 0.95
CALD1-208ENST00000435928 PDZRN3Q9UPQ7 1066 aa20.99■□□□□ 0.95
CALD1-208ENST00000435928 NPHP1O15259 732 aa20.98■□□□□ 0.95
CALD1-208ENST00000435928 PPP2R1AP30153 589 aa20.98■□□□□ 0.95
CALD1-208ENST00000435928 RTF1Q92541 710 aaKnown RBP20.98■□□□□ 0.95
CALD1-208ENST00000435928 BRIP1Q9BX63 1249 aa20.98■□□□□ 0.95
CALD1-208ENST00000435928 CAMTA2O94983 1202 aa20.97■□□□□ 0.95
CALD1-208ENST00000435928 PRELPP51888 382 aa20.97■□□□□ 0.95
CALD1-208ENST00000435928 CNBD1Q8NA66 436 aa20.97■□□□□ 0.95
CALD1-208ENST00000435928 ZNF622Q969S3 477 aaKnown RBP eCLIP20.97■□□□□ 0.95
CALD1-208ENST00000435928 SETDB2Q96T68 719 aa20.97■□□□□ 0.95
CALD1-208ENST00000435928 LAMB4A4D0S4 1761 aa20.97■□□□□ 0.95
CALD1-208ENST00000435928 DLG5Q8TDM6 1919 aa20.96■□□□□ 0.95
CALD1-208ENST00000435928 NFKBIEO00221 500 aa20.96■□□□□ 0.95
CALD1-208ENST00000435928 MCM10Q7L590 875 aa20.96■□□□□ 0.95
CALD1-208ENST00000435928 DZIP3Q86Y13 1208 aaKnown RBP20.96■□□□□ 0.95
CALD1-208ENST00000435928 CCDC24Q8N4L8 307 aa20.96■□□□□ 0.95
CALD1-208ENST00000435928 ST5P78524 1137 aa20.95■□□□□ 0.94
CALD1-208ENST00000435928 DNAJC5GQ8N7S2 189 aa20.95■□□□□ 0.94
CALD1-208ENST00000435928 SLX4Q8IY92 1834 aa20.94■□□□□ 0.94
CALD1-208ENST00000435928 GLTPD2A6NH11 291 aa20.94■□□□□ 0.94
CALD1-208ENST00000435928 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
CALD1-208ENST00000435928 SMC1BQ8NDV3 1235 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms