RNA–Protein interactions for RNA: ENST00000435149.1

NCSTN-206, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 824 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-206ENST00000435149 FAM208AQ9UK61 1670 aaKnown RBP11.79□□□□□ -0.52
NCSTN-206ENST00000435149 ITPK1Q13572 414 aa11.79□□□□□ -0.52
NCSTN-206ENST00000435149 EAPPQ56P03 285 aaPredicted RBP11.79□□□□□ -0.52
NCSTN-206ENST00000435149 CNTROBQ8N137 903 aa11.79□□□□□ -0.52
NCSTN-206ENST00000435149 KDM2AQ9Y2K7 1162 aa11.79□□□□□ -0.52
NCSTN-206ENST00000435149 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
NCSTN-206ENST00000435149 MAP2P11137 1827 aaKnown RBP11.79□□□□□ -0.52
NCSTN-206ENST00000435149 AOC2O75106 756 aa11.78□□□□□ -0.52
NCSTN-206ENST00000435149 ARHGEF1Q92888 912 aaKnown RBP11.78□□□□□ -0.52
NCSTN-206ENST00000435149 LTV1Q96GA3 475 aaPredicted RBP11.78□□□□□ -0.52
NCSTN-206ENST00000435149 RFC4P35249 363 aa11.77□□□□□ -0.53
NCSTN-206ENST00000435149 MAP1SQ66K74 1059 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-206ENST00000435149 L3MBTL3Q96JM7 780 aaPredicted RBP11.77□□□□□ -0.53
NCSTN-206ENST00000435149 SCN4AP35499 1836 aa11.76□□□□□ -0.53
NCSTN-206ENST00000435149 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
NCSTN-206ENST00000435149 BRPF1P55201 1214 aaPredicted RBP11.76□□□□□ -0.53
NCSTN-206ENST00000435149 PIGBQ92521 554 aa11.76□□□□□ -0.53
NCSTN-206ENST00000435149 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
NCSTN-206ENST00000435149 USP31Q70CQ4 1352 aa11.76□□□□□ -0.53
NCSTN-206ENST00000435149 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
NCSTN-206ENST00000435149 DDR1Q08345 913 aa11.75□□□□□ -0.53
NCSTN-206ENST00000435149 TTLL6Q8N841 843 aa11.75□□□□□ -0.53
NCSTN-206ENST00000435149 DCAF11Q8TEB1 546 aa11.75□□□□□ -0.53
NCSTN-206ENST00000435149 IP6K1Q92551 441 aa11.75□□□□□ -0.53
NCSTN-206ENST00000435149 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
NCSTN-206ENST00000435149 DICER1Q9UPY3 1922 aaKnown RBP11.74□□□□□ -0.53
NCSTN-206ENST00000435149 PCDH11XQ9BZA7 1347 aa11.74□□□□□ -0.53
NCSTN-206ENST00000435149 PCDH11YQ9BZA8 1340 aa11.74□□□□□ -0.53
NCSTN-206ENST00000435149 GABBR2O75899 941 aa11.73□□□□□ -0.53
NCSTN-206ENST00000435149 ITGB4P16144 1822 aa11.72□□□□□ -0.53
NCSTN-206ENST00000435149 PNMA8AQ86V59 439 aaPredicted RBP11.72□□□□□ -0.53
NCSTN-206ENST00000435149 STAC3Q96MF2 364 aa11.72□□□□□ -0.53
NCSTN-206ENST00000435149 HACL1Q9UJ83 578 aa11.72□□□□□ -0.53
NCSTN-206ENST00000435149 TLL2Q9Y6L7 1015 aa11.72□□□□□ -0.53
NCSTN-206ENST00000435149 CD163L1Q9NR16 1453 aa11.71□□□□□ -0.53
NCSTN-206ENST00000435149 SMG6Q86US8 1419 aaKnown RBP11.71□□□□□ -0.53
NCSTN-206ENST00000435149 KTN1Q86UP2 1357 aaKnown RBP11.71□□□□□ -0.53
NCSTN-206ENST00000435149 POLRMTO00411 1230 aaKnown RBP11.71□□□□□ -0.53
NCSTN-206ENST00000435149 EPHX2P34913 555 aa11.71□□□□□ -0.53
NCSTN-206ENST00000435149 FKBP8Q14318 412 aa11.71□□□□□ -0.53
NCSTN-206ENST00000435149 SZT2Q5T011 3432 aa11.71□□□□□ -0.54
NCSTN-206ENST00000435149 CENPJQ9HC77 1338 aaPredicted RBP11.7□□□□□ -0.54
NCSTN-206ENST00000435149 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
NCSTN-206ENST00000435149 CIAPIN1Q6FI81 312 aa11.7□□□□□ -0.54
NCSTN-206ENST00000435149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.7□□□□□ -0.54
NCSTN-206ENST00000435149 RAPGEF4Q8WZA2 1011 aa11.7□□□□□ -0.54
NCSTN-206ENST00000435149 ASAP1Q9ULH1 1129 aa11.7□□□□□ -0.54
NCSTN-206ENST00000435149 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
NCSTN-206ENST00000435149 CYP27B1O15528 508 aa11.69□□□□□ -0.54
NCSTN-206ENST00000435149 RPS6KA4O75676 772 aa11.69□□□□□ -0.54
NCSTN-206ENST00000435149 FMR1Q06787 632 aaKnown RBP eCLIP11.69□□□□□ -0.54
NCSTN-206ENST00000435149 CST9Q5W186 159 aa11.69□□□□□ -0.54
NCSTN-206ENST00000435149 NME9Q86XW9 330 aa11.69□□□□□ -0.54
NCSTN-206ENST00000435149 HPS5Q9UPZ3 1129 aa11.69□□□□□ -0.54
NCSTN-206ENST00000435149 A0A0C4DFX4 3053 aa11.69□□□□□ -0.54
NCSTN-206ENST00000435149 LTBP3Q9NS15 1303 aa11.68□□□□□ -0.54
NCSTN-206ENST00000435149 TATP17735 454 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-206ENST00000435149 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
NCSTN-206ENST00000435149 CLCN6P51797 869 aa11.68□□□□□ -0.54
NCSTN-206ENST00000435149 TAOK3Q9H2K8 898 aa11.68□□□□□ -0.54
NCSTN-206ENST00000435149 SRP68Q9UHB9 627 aaKnown RBP11.68□□□□□ -0.54
NCSTN-206ENST00000435149 RGPD2P0DJD1 1756 aa11.68□□□□□ -0.54
NCSTN-206ENST00000435149 MAP3K19Q56UN5 1328 aa11.67□□□□□ -0.54
NCSTN-206ENST00000435149 CNTNAP4Q9C0A0 1308 aa11.67□□□□□ -0.54
NCSTN-206ENST00000435149 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
NCSTN-206ENST00000435149 TM4SF1P30408 202 aa11.67□□□□□ -0.54
NCSTN-206ENST00000435149 CTU1Q7Z7A3 348 aaKnown RBP11.67□□□□□ -0.54
NCSTN-206ENST00000435149 FER1L6Q2WGJ9 1857 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 C21orf2O43822 256 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 NBPF6Q5VWK0 638 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 USHBP1Q8N6Y0 703 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 NBPF4Q96M43 638 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 TMOD3Q9NYL9 352 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
NCSTN-206ENST00000435149 KDRP35968 1356 aa11.66□□□□□ -0.54
NCSTN-206ENST00000435149 MKI67P46013 3256 aaKnown RBP11.65□□□□□ -0.54
NCSTN-206ENST00000435149 H0YIN7 160 aa11.65□□□□□ -0.54
NCSTN-206ENST00000435149 HOXC9P31274 260 aa11.65□□□□□ -0.54
NCSTN-206ENST00000435149 SAPCD2Q86UD0 394 aa11.65□□□□□ -0.54
NCSTN-206ENST00000435149 HHIPL1Q96JK4 782 aa11.65□□□□□ -0.54
NCSTN-206ENST00000435149 ATG3Q9NT62 314 aa11.65□□□□□ -0.54
NCSTN-206ENST00000435149 INSRP06213 1382 aa11.65□□□□□ -0.55
NCSTN-206ENST00000435149 RNF123Q5XPI4 1314 aa11.64□□□□□ -0.55
NCSTN-206ENST00000435149 EVC2Q86UK5 1308 aa11.64□□□□□ -0.55
NCSTN-206ENST00000435149 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
NCSTN-206ENST00000435149 SLC4A9Q96Q91 983 aa11.64□□□□□ -0.55
NCSTN-206ENST00000435149 SAGE1Q9NXZ1 904 aa11.64□□□□□ -0.55
NCSTN-206ENST00000435149 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
NCSTN-206ENST00000435149 ZNF541Q9H0D2 1346 aa11.63□□□□□ -0.55
NCSTN-206ENST00000435149 COL6A3P12111 3177 aa11.62□□□□□ -0.55
NCSTN-206ENST00000435149 TRPM7Q96QT4 1865 aa11.62□□□□□ -0.55
NCSTN-206ENST00000435149 TRAF5O00463 557 aa11.62□□□□□ -0.55
NCSTN-206ENST00000435149 NOGQ13253 232 aa11.62□□□□□ -0.55
NCSTN-206ENST00000435149 AKAP4Q5JQC9 854 aa11.62□□□□□ -0.55
NCSTN-206ENST00000435149 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
NCSTN-206ENST00000435149 ZIC5Q96T25 663 aa11.62□□□□□ -0.55
NCSTN-206ENST00000435149 COL5A3P25940 1745 aaPredicted RBP11.62□□□□□ -0.55
NCSTN-206ENST00000435149 SBNO2Q9Y2G9 1366 aa11.62□□□□□ -0.55
NCSTN-206ENST00000435149 AMPHP49418 695 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms