RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
MCF2L-215ENST00000433807 GIGYF1O75420 1035 aaPredicted RBP17.02■□□□□ 0.32
MCF2L-215ENST00000433807 SSFA2P28290 1259 aa17.02■□□□□ 0.32
MCF2L-215ENST00000433807 INTS5Q6P9B9 1019 aaKnown RBP17.02■□□□□ 0.32
MCF2L-215ENST00000433807 MBIPQ9NS73 344 aa17.02■□□□□ 0.32
MCF2L-215ENST00000433807 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.32
MCF2L-215ENST00000433807 RTCBQ9Y3I0 505 aaKnown RBP17.02■□□□□ 0.32
MCF2L-215ENST00000433807 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
MCF2L-215ENST00000433807 RPS6KA4O75676 772 aa17.01■□□□□ 0.31
MCF2L-215ENST00000433807 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
MCF2L-215ENST00000433807 ZNF521Q96K83 1311 aa17■□□□□ 0.31
MCF2L-215ENST00000433807 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17■□□□□ 0.31
MCF2L-215ENST00000433807 ADRA2BP18089 450 aa17■□□□□ 0.31
MCF2L-215ENST00000433807 AMIGO3Q86WK7 504 aa16.99■□□□□ 0.31
MCF2L-215ENST00000433807 COL23A1Q86Y22 540 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-215ENST00000433807 PDGFDQ9GZP0 370 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-215ENST00000433807 ZBTB1Q9Y2K1 713 aa16.99■□□□□ 0.31
MCF2L-215ENST00000433807 PHF14O94880 888 aa16.98■□□□□ 0.31
MCF2L-215ENST00000433807 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
MCF2L-215ENST00000433807 SLC16A10Q8TF71 515 aa16.98■□□□□ 0.31
MCF2L-215ENST00000433807 C4AP0C0L4 1744 aa16.98■□□□□ 0.31
MCF2L-215ENST00000433807 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-215ENST00000433807 MSH5O43196 834 aa16.97■□□□□ 0.31
MCF2L-215ENST00000433807 HOXB7P09629 217 aa16.97■□□□□ 0.31
MCF2L-215ENST00000433807 CANXP27824 592 aaKnown RBP16.97■□□□□ 0.31
MCF2L-215ENST00000433807 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.31
MCF2L-215ENST00000433807 A1BGP04217 495 aa16.96■□□□□ 0.31
MCF2L-215ENST00000433807 IL6STP40189 918 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-215ENST00000433807 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
MCF2L-215ENST00000433807 SMIM5Q71RC9 77 aa16.96■□□□□ 0.31
MCF2L-215ENST00000433807 ARHGEF1Q92888 912 aaKnown RBP16.96■□□□□ 0.31
MCF2L-215ENST00000433807 TSR2Q969E8 191 aaKnown RBP16.96■□□□□ 0.31
MCF2L-215ENST00000433807 EIF5P55010 431 aaKnown RBP16.95■□□□□ 0.3
MCF2L-215ENST00000433807 MTFR1LQ9H019 292 aa16.95■□□□□ 0.3
MCF2L-215ENST00000433807 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
MCF2L-215ENST00000433807 ERBB4Q15303 1308 aa16.95■□□□□ 0.3
MCF2L-215ENST00000433807 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
MCF2L-215ENST00000433807 COL15A1P39059 1388 aa16.94■□□□□ 0.3
MCF2L-215ENST00000433807 A0A087WZG4 1122 aa16.94■□□□□ 0.3
MCF2L-215ENST00000433807 ZBTB7AO95365 584 aa16.94■□□□□ 0.3
MCF2L-215ENST00000433807 RFC4P35249 363 aa16.94■□□□□ 0.3
MCF2L-215ENST00000433807 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
MCF2L-215ENST00000433807 DUSP27Q5VZP5 1158 aa16.94■□□□□ 0.3
MCF2L-215ENST00000433807 CACNA1FO60840 1977 aa16.94■□□□□ 0.3
MCF2L-215ENST00000433807 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
MCF2L-215ENST00000433807 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-215ENST00000433807 LRP5O75197 1615 aa16.92■□□□□ 0.3
MCF2L-215ENST00000433807 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
MCF2L-215ENST00000433807 E9PSI1 815 aa16.92■□□□□ 0.3
MCF2L-215ENST00000433807 HNRNPUQ00839 825 aaKnown RBP eCLIP16.92■□□□□ 0.3
MCF2L-215ENST00000433807 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
MCF2L-215ENST00000433807 NPM2Q86SE8 214 aaKnown RBP16.92■□□□□ 0.3
MCF2L-215ENST00000433807 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
MCF2L-215ENST00000433807 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
MCF2L-215ENST00000433807 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
MCF2L-215ENST00000433807 PIP4K2AP48426 406 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-215ENST00000433807 HDGFL1Q5TGJ6 251 aa16.91■□□□□ 0.3
MCF2L-215ENST00000433807 CHMP4AQ9BY43 222 aa16.91■□□□□ 0.3
MCF2L-215ENST00000433807 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-215ENST00000433807 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-215ENST00000433807 USP42Q9H9J4 1324 aaKnown RBP16.91■□□□□ 0.3
MCF2L-215ENST00000433807 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-215ENST00000433807 ZPR1O75312 459 aa16.9■□□□□ 0.3
MCF2L-215ENST00000433807 NARFQ9UHQ1 456 aa16.9■□□□□ 0.3
MCF2L-215ENST00000433807 BCORQ6W2J9 1755 aa16.89■□□□□ 0.3
MCF2L-215ENST00000433807 SCN7AQ01118 1682 aa16.89■□□□□ 0.29
MCF2L-215ENST00000433807 SLFN5Q08AF3 891 aa16.89■□□□□ 0.29
MCF2L-215ENST00000433807 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
MCF2L-215ENST00000433807 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
MCF2L-215ENST00000433807 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
MCF2L-215ENST00000433807 GYS1P13807 737 aa16.88■□□□□ 0.29
MCF2L-215ENST00000433807 MYL6BP14649 208 aa16.88■□□□□ 0.29
MCF2L-215ENST00000433807 PDIA6Q15084 440 aa16.88■□□□□ 0.29
MCF2L-215ENST00000433807 TWISTNBQ3B726 338 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-215ENST00000433807 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
MCF2L-215ENST00000433807 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
MCF2L-215ENST00000433807 DDX21Q9NR30 783 aaKnown RBP eCLIP16.88■□□□□ 0.29
MCF2L-215ENST00000433807 POLD1P28340 1107 aa16.87■□□□□ 0.29
MCF2L-215ENST00000433807 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
MCF2L-215ENST00000433807 DZIP3Q86Y13 1208 aaKnown RBP16.87■□□□□ 0.29
MCF2L-215ENST00000433807 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
MCF2L-215ENST00000433807 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
MCF2L-215ENST00000433807 SGIP1Q9BQI5 828 aa16.87■□□□□ 0.29
MCF2L-215ENST00000433807 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
MCF2L-215ENST00000433807 TBC1D2BQ9UPU7 963 aa16.87■□□□□ 0.29
MCF2L-215ENST00000433807 NUP98P52948 1817 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 PTGER2P43116 358 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 CCDC30Q5VVM6 783 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 LRP10Q7Z4F1 713 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 ARXQ96QS3 562 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 CHPF2Q9P2E5 772 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
MCF2L-215ENST00000433807 VAMP4O75379 141 aa16.85■□□□□ 0.29
MCF2L-215ENST00000433807 CAMTA2O94983 1202 aa16.85■□□□□ 0.29
MCF2L-215ENST00000433807 ANXA1P04083 346 aa16.85■□□□□ 0.29
MCF2L-215ENST00000433807 TRMT2AQ8IZ69 625 aaKnown RBP16.85■□□□□ 0.29
MCF2L-215ENST00000433807 RGL2O15211 777 aa16.84■□□□□ 0.29
MCF2L-215ENST00000433807 FKBP8Q14318 412 aa16.84■□□□□ 0.29
MCF2L-215ENST00000433807 KIF6Q6ZMV9 814 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms