RNA–Protein interactions for RNA: ENST00000431519.6

CDV3-203, Transcript of CDV3 homolog, humanhuman

TSL 1 (best) BASIC

Gene CDV3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-203ENST00000431519 U2AF1L5P0DN76 240 aaPredicted RBP41.4■■■■■ 4.22
CDV3-203ENST00000431519 U2AF1Q01081 240 aaKnown RBP eCLIP41.4■■■■■ 4.22
CDV3-203ENST00000431519 CANXP27824 592 aaKnown RBP41.38■■■■■ 4.21
CDV3-203ENST00000431519 ZNF526Q8TF50 670 aaPredicted RBP41.38■■■■■ 4.21
CDV3-203ENST00000431519 ZNF496Q96IT1 587 aaPredicted RBP41.38■■■■■ 4.21
CDV3-203ENST00000431519 ADCY9O60503 1353 aa41.37■■■■■ 4.21
CDV3-203ENST00000431519 ZNF790Q6PG37 636 aa41.37■■■■■ 4.21
CDV3-203ENST00000431519 SIPA1L3O60292 1781 aaPredicted RBP41.37■■■■■ 4.21
CDV3-203ENST00000431519 POLRMTO00411 1230 aaKnown RBP41.35■■■■■ 4.21
CDV3-203ENST00000431519 NARFQ9UHQ1 456 aa41.35■■■■■ 4.21
CDV3-203ENST00000431519 SENP3-EIF4A1A0A087X0R7 540 aa41.34■■■■■ 4.21
CDV3-203ENST00000431519 FCHSD2O94868 740 aa41.34■■■■■ 4.21
CDV3-203ENST00000431519 TM4SF1P30408 202 aa41.34■■■■■ 4.21
CDV3-203ENST00000431519 STARD3NLO95772 234 aa41.33■■■■■ 4.21
CDV3-203ENST00000431519 GPBP1L1Q9HC44 474 aaPredicted RBP41.33■■■■■ 4.21
CDV3-203ENST00000431519 CEMIPQ8WUJ3 1361 aa41.32■■■■■ 4.21
CDV3-203ENST00000431519 HEG1Q9ULI3 1381 aa41.32■■■■■ 4.21
CDV3-203ENST00000431519 KCNA3P22001 575 aa41.31■■■■■ 4.2
CDV3-203ENST00000431519 BRCA1P38398 1863 aaKnown RBP41.3■■■■■ 4.2
CDV3-203ENST00000431519 NFIXQ14938 502 aa41.29■■■■■ 4.2
CDV3-203ENST00000431519 ARHGAP27Q6ZUM4 889 aa41.29■■■■■ 4.2
CDV3-203ENST00000431519 KCNQ3O43525 872 aa41.28■■■■■ 4.2
CDV3-203ENST00000431519 BCL2L12Q9HB09 334 aa41.28■■■■■ 4.2
CDV3-203ENST00000431519 BTBD11A6QL63 1104 aa41.27■■■■■ 4.2
CDV3-203ENST00000431519 CHRNA5P30532 468 aa41.27■■■■■ 4.2
CDV3-203ENST00000431519 FMNL2Q96PY5 1086 aa41.27■■■■■ 4.2
CDV3-203ENST00000431519 ZNF330Q9Y3S2 320 aaPredicted RBP41.27■■■■■ 4.2
CDV3-203ENST00000431519 PIM2Q9P1W9 311 aa41.26■■■■■ 4.2
CDV3-203ENST00000431519 MCM10Q7L590 875 aa41.25■■■■■ 4.19
CDV3-203ENST00000431519 EIF5P55010 431 aaKnown RBP41.24■■■■■ 4.19
CDV3-203ENST00000431519 RTF1Q92541 710 aaKnown RBP41.24■■■■■ 4.19
CDV3-203ENST00000431519 TEX13AQ9BXU3 409 aaPredicted RBP41.23■■■■■ 4.19
CDV3-203ENST00000431519 AFDNP55196 1824 aaKnown RBP41.23■■■■■ 4.19
CDV3-203ENST00000431519 BICDL1Q6ZP65 573 aa41.21■■■■■ 4.19
CDV3-203ENST00000431519 DCTN1Q14203 1278 aa41.2■■■■■ 4.19
CDV3-203ENST00000431519 DALRD3Q5D0E6 543 aaKnown RBP41.2■■■■■ 4.19
CDV3-203ENST00000431519 A0A087WZG4 1122 aa41.19■■■■■ 4.18
CDV3-203ENST00000431519 A1BGP04217 495 aa41.19■■■■■ 4.18
CDV3-203ENST00000431519 SERPINB2P05120 415 aa41.19■■■■■ 4.18
CDV3-203ENST00000431519 ARFGEF1Q9Y6D6 1849 aa41.18■■■■■ 4.18
CDV3-203ENST00000431519 TBC1D2BQ9UPU7 963 aa41.17■■■■■ 4.18
CDV3-203ENST00000431519 NRXN2Q9P2S2 1712 aa41.15■■■■■ 4.18
CDV3-203ENST00000431519 IL6STP40189 918 aaPredicted RBP41.13■■■■■ 4.17
CDV3-203ENST00000431519 PRAMEF22A3QJZ6 481 aa41.12■■■■■ 4.17
CDV3-203ENST00000431519 TBC1D9BQ66K14 1250 aa41.12■■■■■ 4.17
CDV3-203ENST00000431519 SCN7AQ01118 1682 aa41.11■■■■■ 4.17
CDV3-203ENST00000431519 PIP4K2AP48426 406 aaPredicted RBP41.11■■■■■ 4.17
CDV3-203ENST00000431519 NPM2Q86SE8 214 aaKnown RBP41.11■■■■■ 4.17
CDV3-203ENST00000431519 USP16Q9Y5T5 823 aa41.11■■■■■ 4.17
CDV3-203ENST00000431519 CARMIL3Q8ND23 1372 aa41.1■■■■■ 4.17
CDV3-203ENST00000431519 HTATSF1O43719 755 aaKnown RBP41.08■■■■■ 4.17
CDV3-203ENST00000431519 C9orf131Q5VYM1 1079 aa41.08■■■■■ 4.17
CDV3-203ENST00000431519 NEFMP07197 916 aa41.07■■■■■ 4.17
CDV3-203ENST00000431519 SNRPA1P09661 255 aaKnown RBP41.04■■■■■ 4.16
CDV3-203ENST00000431519 C2CD5Q86YS7 1000 aa41.04■■■■■ 4.16
CDV3-203ENST00000431519 CCDC24Q8N4L8 307 aa41.03■■■■■ 4.16
CDV3-203ENST00000431519 MIS18AQ9NYP9 233 aa41.03■■■■■ 4.16
CDV3-203ENST00000431519 KIF3CO14782 793 aa41.02■■■■■ 4.16
CDV3-203ENST00000431519 CAMTA2O94983 1202 aa41.02■■■■■ 4.16
CDV3-203ENST00000431519 DZIP3Q86Y13 1208 aaKnown RBP41.02■■■■■ 4.16
CDV3-203ENST00000431519 DLG5Q8TDM6 1919 aa41.01■■■■■ 4.16
CDV3-203ENST00000431519 TAF7Q15545 349 aaPredicted RBP41.01■■■■■ 4.16
CDV3-203ENST00000431519 DLEC1Q9Y238 1755 aa41■■■■■ 4.15
CDV3-203ENST00000431519 RNF181Q9P0P0 153 aa41■■■■■ 4.15
CDV3-203ENST00000431519 H0YIN7 160 aa40.99■■■■■ 4.15
CDV3-203ENST00000431519 PLEKHF1Q96S99 279 aa40.99■■■■■ 4.15
CDV3-203ENST00000431519 PRR5LQ6MZQ0 368 aa40.97■■■■■ 4.15
CDV3-203ENST00000431519 TTLL6Q8N841 843 aa40.97■■■■■ 4.15
CDV3-203ENST00000431519 SETDB2Q96T68 719 aa40.97■■■■■ 4.15
CDV3-203ENST00000431519 BCORQ6W2J9 1755 aa40.97■■■■■ 4.15
CDV3-203ENST00000431519 ANKRD31Q8N7Z5 1873 aa40.96■■■■■ 4.15
CDV3-203ENST00000431519 NPHP1O15259 732 aa40.95■■■■■ 4.15
CDV3-203ENST00000431519 RASSF7Q02833 373 aa40.95■■■■■ 4.15
CDV3-203ENST00000431519 NFE2L2Q16236 605 aa40.94■■■■■ 4.14
CDV3-203ENST00000431519 THUMPD2Q9BTF0 503 aaKnown RBP40.94■■■■■ 4.14
CDV3-203ENST00000431519 NMRK2Q9NPI5 230 aa40.94■■■■■ 4.14
CDV3-203ENST00000431519 MAPK8IP3Q9UPT6 1336 aa40.93■■■■■ 4.14
CDV3-203ENST00000431519 NBPF26B4DH59 902 aa40.91■■■■■ 4.14
CDV3-203ENST00000431519 DDX10Q13206 875 aaKnown RBP40.91■■■■■ 4.14
CDV3-203ENST00000431519 NBPF10Q6P3W6 841 aaKnown RBP40.91■■■■■ 4.14
CDV3-203ENST00000431519 NBPF15Q8N660 670 aa40.91■■■■■ 4.14
CDV3-203ENST00000431519 CNBD1Q8NA66 436 aa40.91■■■■■ 4.14
CDV3-203ENST00000431519 ZNF622Q969S3 477 aaKnown RBP eCLIP40.91■■■■■ 4.14
CDV3-203ENST00000431519 BRIP1Q9BX63 1249 aa40.91■■■■■ 4.14
CDV3-203ENST00000431519 SBF1O95248 1867 aa40.91■■■■■ 4.14
CDV3-203ENST00000431519 PDE6BP35913 854 aa40.9■■■■■ 4.14
CDV3-203ENST00000431519 CEP350Q5VT06 3117 aa40.89■■■■■ 4.14
CDV3-203ENST00000431519 RALBP1Q15311 655 aa40.88■■■■■ 4.13
CDV3-203ENST00000431519 PNNQ9H307 717 aaKnown RBP40.88■■■■■ 4.13
CDV3-203ENST00000431519 COL11A2P13942 1736 aaPredicted RBP40.87■■■■■ 4.13
CDV3-203ENST00000431519 HSPA6P17066 643 aa40.87■■■■■ 4.13
CDV3-203ENST00000431519 PNISRQ8TF01 805 aaKnown RBP40.87■■■■■ 4.13
CDV3-203ENST00000431519 KDM3BQ7LBC6 1761 aa40.86■■■■■ 4.13
CDV3-203ENST00000431519 ZNF219Q9P2Y4 722 aaPredicted RBP40.86■■■■■ 4.13
CDV3-203ENST00000431519 LAMB4A4D0S4 1761 aa40.85■■■■■ 4.13
CDV3-203ENST00000431519 ST5P78524 1137 aa40.85■■■■■ 4.13
CDV3-203ENST00000431519 ZNF652Q9Y2D9 606 aa40.85■■■■■ 4.13
CDV3-203ENST00000431519 PDZRN3Q9UPQ7 1066 aa40.83■■■■■ 4.13
CDV3-203ENST00000431519 PRELPP51888 382 aa40.82■■■■■ 4.13
CDV3-203ENST00000431519 CLEC4GQ6UXB4 293 aa40.82■■■■■ 4.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms