RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
TTC3-208ENST00000428693 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
TTC3-208ENST00000428693 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
TTC3-208ENST00000428693 MRC1P22897 1456 aa16.07■□□□□ 0.16
TTC3-208ENST00000428693 COL15A1P39059 1388 aa16.06■□□□□ 0.16
TTC3-208ENST00000428693 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
TTC3-208ENST00000428693 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
TTC3-208ENST00000428693 RTF1Q92541 710 aaKnown RBP16.06■□□□□ 0.16
TTC3-208ENST00000428693 KCPQ6ZWJ8 1503 aa16.05■□□□□ 0.16
TTC3-208ENST00000428693 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
TTC3-208ENST00000428693 ZNF790Q6PG37 636 aa16.05■□□□□ 0.16
TTC3-208ENST00000428693 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
TTC3-208ENST00000428693 RSPH6AQ9H0K4 717 aa16.05■□□□□ 0.16
TTC3-208ENST00000428693 PIM2Q9P1W9 311 aa16.05■□□□□ 0.16
TTC3-208ENST00000428693 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
TTC3-208ENST00000428693 KIF13BQ9NQT8 1826 aa16.04■□□□□ 0.16
TTC3-208ENST00000428693 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
TTC3-208ENST00000428693 CHRNA5P30532 468 aa16.04■□□□□ 0.16
TTC3-208ENST00000428693 NEFMP07197 916 aa16.03■□□□□ 0.16
TTC3-208ENST00000428693 NFIXQ14938 502 aa16.03■□□□□ 0.16
TTC3-208ENST00000428693 DALRD3Q5D0E6 543 aaKnown RBP16.03■□□□□ 0.16
TTC3-208ENST00000428693 MCM10Q7L590 875 aa16.03■□□□□ 0.16
TTC3-208ENST00000428693 FMNL2Q96PY5 1086 aa16.03■□□□□ 0.16
TTC3-208ENST00000428693 TM4SF1P30408 202 aa16.02■□□□□ 0.16
TTC3-208ENST00000428693 TEX13AQ9BXU3 409 aaPredicted RBP16.02■□□□□ 0.16
TTC3-208ENST00000428693 HEG1Q9ULI3 1381 aa16.01■□□□□ 0.15
TTC3-208ENST00000428693 A0A087WZG4 1122 aa16.01■□□□□ 0.15
TTC3-208ENST00000428693 NPHP1O15259 732 aa16.01■□□□□ 0.15
TTC3-208ENST00000428693 KCNQ3O43525 872 aa16.01■□□□□ 0.15
TTC3-208ENST00000428693 SERPINB2P05120 415 aa16.01■□□□□ 0.15
TTC3-208ENST00000428693 TBC1D2BQ9UPU7 963 aa16.01■□□□□ 0.15
TTC3-208ENST00000428693 ADAMTS7Q9UKP4 1686 aa16.01■□□□□ 0.15
TTC3-208ENST00000428693 ADCY9O60503 1353 aa16■□□□□ 0.15
TTC3-208ENST00000428693 KIAA1551Q9HCM1 1747 aa16■□□□□ 0.15
TTC3-208ENST00000428693 A1BGP04217 495 aa16■□□□□ 0.15
TTC3-208ENST00000428693 KCNA3P22001 575 aa16■□□□□ 0.15
TTC3-208ENST00000428693 DCTN1Q14203 1278 aa16■□□□□ 0.15
TTC3-208ENST00000428693 EIF5P55010 431 aaKnown RBP15.99■□□□□ 0.15
TTC3-208ENST00000428693 BCL2L12Q9HB09 334 aa15.99■□□□□ 0.15
TTC3-208ENST00000428693 UBR2Q8IWV8 1755 aa15.99■□□□□ 0.15
TTC3-208ENST00000428693 PIP4K2AP48426 406 aaPredicted RBP15.98■□□□□ 0.15
TTC3-208ENST00000428693 C9orf131Q5VYM1 1079 aa15.98■□□□□ 0.15
TTC3-208ENST00000428693 TBC1D9BQ66K14 1250 aa15.97■□□□□ 0.15
TTC3-208ENST00000428693 C2CD5Q86YS7 1000 aa15.97■□□□□ 0.15
TTC3-208ENST00000428693 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
TTC3-208ENST00000428693 CEMIPQ8WUJ3 1361 aa15.97■□□□□ 0.15
TTC3-208ENST00000428693 IL6STP40189 918 aaPredicted RBP15.96■□□□□ 0.15
TTC3-208ENST00000428693 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
TTC3-208ENST00000428693 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
TTC3-208ENST00000428693 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.14
TTC3-208ENST00000428693 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
TTC3-208ENST00000428693 PRAMEF22A3QJZ6 481 aa15.95■□□□□ 0.14
TTC3-208ENST00000428693 H0YIN7 160 aa15.95■□□□□ 0.14
TTC3-208ENST00000428693 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.142e-9■■□□□ 11.9
TTC3-208ENST00000428693 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
TTC3-208ENST00000428693 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
TTC3-208ENST00000428693 BRCA1P38398 1863 aaKnown RBP15.95■□□□□ 0.14
TTC3-208ENST00000428693 SNRPA1P09661 255 aaKnown RBP15.94■□□□□ 0.14
TTC3-208ENST00000428693 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
TTC3-208ENST00000428693 SETDB2Q96T68 719 aa15.94■□□□□ 0.14
TTC3-208ENST00000428693 TTLL6Q8N841 843 aa15.93■□□□□ 0.14
TTC3-208ENST00000428693 ARFGEF1Q9Y6D6 1849 aa15.93■□□□□ 0.14
TTC3-208ENST00000428693 MAPK8IP3Q9UPT6 1336 aa15.93■□□□□ 0.14
TTC3-208ENST00000428693 CARMIL3Q8ND23 1372 aa15.92■□□□□ 0.14
TTC3-208ENST00000428693 KIF3CO14782 793 aa15.92■□□□□ 0.14
TTC3-208ENST00000428693 HTATSF1O43719 755 aaKnown RBP15.92■□□□□ 0.14
TTC3-208ENST00000428693 RASSF7Q02833 373 aa15.92■□□□□ 0.14
TTC3-208ENST00000428693 TAF7Q15545 349 aaPredicted RBP15.92■□□□□ 0.14
TTC3-208ENST00000428693 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
TTC3-208ENST00000428693 C16orf71Q8IYS4 520 aaPredicted RBP15.92■□□□□ 0.14
TTC3-208ENST00000428693 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
TTC3-208ENST00000428693 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
TTC3-208ENST00000428693 CNBD1Q8NA66 436 aa15.91■□□□□ 0.14
TTC3-208ENST00000428693 FAM177BA6PVY3 158 aa15.9■□□□□ 0.14
TTC3-208ENST00000428693 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
TTC3-208ENST00000428693 PDE6BP35913 854 aa15.9■□□□□ 0.14
TTC3-208ENST00000428693 ST5P78524 1137 aa15.9■□□□□ 0.14
TTC3-208ENST00000428693 DDX10Q13206 875 aaKnown RBP15.9■□□□□ 0.14
TTC3-208ENST00000428693 PRR5LQ6MZQ0 368 aa15.9■□□□□ 0.14
TTC3-208ENST00000428693 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
TTC3-208ENST00000428693 PNNQ9H307 717 aaKnown RBP15.9■□□□□ 0.14
TTC3-208ENST00000428693 CEP350Q5VT06 3117 aa15.9■□□□□ 0.14
TTC3-208ENST00000428693 HSPA6P17066 643 aa15.89■□□□□ 0.13
TTC3-208ENST00000428693 NBPF5PQ86XG9 351 aaPredicted RBP15.89■□□□□ 0.13
TTC3-208ENST00000428693 BRIP1Q9BX63 1249 aa15.89■□□□□ 0.13
TTC3-208ENST00000428693 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
TTC3-208ENST00000428693 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
TTC3-208ENST00000428693 NFE2L2Q16236 605 aa15.88■□□□□ 0.13
TTC3-208ENST00000428693 PNISRQ8TF01 805 aaKnown RBP15.88■□□□□ 0.13
TTC3-208ENST00000428693 SCN7AQ01118 1682 aa15.88■□□□□ 0.13
TTC3-208ENST00000428693 NRXN2Q9P2S2 1712 aa15.88■□□□□ 0.13
TTC3-208ENST00000428693 C21orf2O43822 256 aa15.87■□□□□ 0.13
TTC3-208ENST00000428693 TOMM70O94826 608 aa15.87■□□□□ 0.13
TTC3-208ENST00000428693 RRAGCQ9HB90 399 aa15.87■□□□□ 0.13
TTC3-208ENST00000428693 LMNB1P20700 586 aa15.86■□□□□ 0.13
TTC3-208ENST00000428693 GTF2E1P29083 439 aaPredicted RBP15.86■□□□□ 0.13
TTC3-208ENST00000428693 PLEKHF1Q96S99 279 aa15.86■□□□□ 0.13
TTC3-208ENST00000428693 NIP7Q9Y221 180 aaKnown RBP eCLIP15.86■□□□□ 0.13
TTC3-208ENST00000428693 RRP7AQ9Y3A4 280 aaKnown RBP15.86■□□□□ 0.13
TTC3-208ENST00000428693 DLG5Q8TDM6 1919 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms