RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
ERCC3-202ENST00000426778 SSH2Q76I76 1423 aa17.43■□□□□ 0.38
ERCC3-202ENST00000426778 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
ERCC3-202ENST00000426778 OS9Q13438 667 aaPredicted RBP17.42■□□□□ 0.38
ERCC3-202ENST00000426778 USP48Q86UV5 1035 aa17.42■□□□□ 0.38
ERCC3-202ENST00000426778 LRRC59Q96AG4 307 aaKnown RBP17.42■□□□□ 0.38
ERCC3-202ENST00000426778 CUL4AQ13619 759 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 SRCIN1Q9C0H9 1055 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
ERCC3-202ENST00000426778 KCNA6P17658 529 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 MPRIPQ6WCQ1 1025 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 CNPY2Q9Y2B0 182 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 MAP3K5Q99683 1374 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 TTC21AQ8NDW8 1320 aa17.41■□□□□ 0.38
ERCC3-202ENST00000426778 ZNF830Q96NB3 372 aaPredicted RBP17.41■□□□□ 0.38
ERCC3-202ENST00000426778 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
ERCC3-202ENST00000426778 PI4K2BQ8TCG2 481 aa17.4■□□□□ 0.38
ERCC3-202ENST00000426778 NALCNQ8IZF0 1738 aa17.4■□□□□ 0.38
ERCC3-202ENST00000426778 LARGE1O95461 756 aa17.4■□□□□ 0.38
ERCC3-202ENST00000426778 STAP2Q9UGK3 403 aa17.4■□□□□ 0.38
ERCC3-202ENST00000426778 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
ERCC3-202ENST00000426778 COL9A3Q14050 684 aaPredicted RBP17.39■□□□□ 0.37
ERCC3-202ENST00000426778 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
ERCC3-202ENST00000426778 SSH3Q8TE77 659 aa17.39■□□□□ 0.37
ERCC3-202ENST00000426778 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
ERCC3-202ENST00000426778 SNX14Q9Y5W7 946 aa17.39■□□□□ 0.37
ERCC3-202ENST00000426778 AK2P54819 239 aa17.39■□□□□ 0.37
ERCC3-202ENST00000426778 PDLIM2Q96JY6 352 aa17.39■□□□□ 0.37
ERCC3-202ENST00000426778 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
ERCC3-202ENST00000426778 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
ERCC3-202ENST00000426778 FIBPO43427 364 aa17.38■□□□□ 0.37
ERCC3-202ENST00000426778 HSPA4P34932 840 aa17.38■□□□□ 0.37
ERCC3-202ENST00000426778 PLCB2Q00722 1185 aa17.38■□□□□ 0.37
ERCC3-202ENST00000426778 OFD1O75665 1012 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 XRN1Q8IZH2 1706 aaKnown RBP17.37■□□□□ 0.37
ERCC3-202ENST00000426778 MCM2P49736 904 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 PROSER3Q2NL68 480 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
ERCC3-202ENST00000426778 PIK3C2AO00443 1686 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
ERCC3-202ENST00000426778 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
ERCC3-202ENST00000426778 LMOD2Q6P5Q4 547 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 RUFY3Q7L099 469 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 TSPY26PQ9H489 355 aa17.37■□□□□ 0.37
ERCC3-202ENST00000426778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
ERCC3-202ENST00000426778 SGSM2O43147 1006 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 MBD3O95983 291 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 PTH1RQ03431 593 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 ADCK5Q3MIX3 580 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 TCEANC2Q96MN5 208 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
ERCC3-202ENST00000426778 ANAPC15P60006 121 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 CCDC83Q8IWF9 413 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 FAM13BQ9NYF5 915 aa17.36■□□□□ 0.37
ERCC3-202ENST00000426778 C17orf53Q8N3J3 647 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-202ENST00000426778 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
ERCC3-202ENST00000426778 EIF4A1P60842 406 aaKnown RBP17.35■□□□□ 0.37
ERCC3-202ENST00000426778 AIMP1Q12904 312 aaKnown RBP17.35■□□□□ 0.37
ERCC3-202ENST00000426778 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-202ENST00000426778 LSG1Q9H089 658 aaKnown RBP17.35■□□□□ 0.37
ERCC3-202ENST00000426778 USP25Q9UHP3 1055 aa17.35■□□□□ 0.37
ERCC3-202ENST00000426778 RPAP1Q9BWH6 1393 aaPredicted RBP17.35■□□□□ 0.37
ERCC3-202ENST00000426778 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
ERCC3-202ENST00000426778 PRPF40BQ6NWY9 871 aaKnown RBP17.34■□□□□ 0.37
ERCC3-202ENST00000426778 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
ERCC3-202ENST00000426778 BEND3Q5T5X7 828 aa17.34■□□□□ 0.37
ERCC3-202ENST00000426778 NECAB1Q8N987 351 aa17.34■□□□□ 0.37
ERCC3-202ENST00000426778 RAD50Q92878 1312 aa17.34■□□□□ 0.37
ERCC3-202ENST00000426778 ZKSCAN5Q9Y2L8 839 aa17.34■□□□□ 0.37
ERCC3-202ENST00000426778 SYT1P21579 422 aa17.34■□□□□ 0.37
ERCC3-202ENST00000426778 KIF1BPQ96EK5 621 aa17.34■□□□□ 0.37
ERCC3-202ENST00000426778 SIL1Q9H173 461 aa17.34■□□□□ 0.37
ERCC3-202ENST00000426778 DIP2AQ14689 1571 aa17.33■□□□□ 0.37
ERCC3-202ENST00000426778 HCLS1P14317 486 aaPredicted RBP17.33■□□□□ 0.37
ERCC3-202ENST00000426778 TEFQ10587 303 aa17.33■□□□□ 0.37
ERCC3-202ENST00000426778 POLA2Q14181 598 aa17.33■□□□□ 0.37
ERCC3-202ENST00000426778 CNTROBQ8N137 903 aa17.33■□□□□ 0.37
ERCC3-202ENST00000426778 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.36
ERCC3-202ENST00000426778 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
ERCC3-202ENST00000426778 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
ERCC3-202ENST00000426778 JAKMIP1Q96N16 626 aaKnown RBP17.33■□□□□ 0.36
ERCC3-202ENST00000426778 DIAPH3Q9NSV4 1193 aa17.33■□□□□ 0.36
ERCC3-202ENST00000426778 RRP9O43818 475 aaKnown RBP17.32■□□□□ 0.36
ERCC3-202ENST00000426778 FAM173BQ6P4H8 233 aa17.32■□□□□ 0.36
ERCC3-202ENST00000426778 ZNF530Q6P9A1 599 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-202ENST00000426778 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-202ENST00000426778 KLHDC4Q8TBB5 520 aa17.32■□□□□ 0.36
ERCC3-202ENST00000426778 C9orf78Q9NZ63 289 aaPredicted RBP17.32■□□□□ 0.36
ERCC3-202ENST00000426778 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
ERCC3-202ENST00000426778 FERMT3Q86UX7 667 aa17.31■□□□□ 0.36
ERCC3-202ENST00000426778 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
ERCC3-202ENST00000426778 NWD1Q149M9 1564 aa17.31■□□□□ 0.36
ERCC3-202ENST00000426778 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
ERCC3-202ENST00000426778 GIMAP6Q6P9H5 292 aa17.31■□□□□ 0.36
ERCC3-202ENST00000426778 TTC14Q96N46 770 aa17.31■□□□□ 0.36
ERCC3-202ENST00000426778 SMC3Q9UQE7 1217 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 402.6 ms