RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 CANXP27824 592 aaKnown RBP33.36■■■□□ 2.93
PTPMT1-203ENST00000426530 HEG1Q9ULI3 1381 aa33.35■■■□□ 2.93
PTPMT1-203ENST00000426530 BRCA1P38398 1863 aaKnown RBP33.35■■■□□ 2.93
PTPMT1-203ENST00000426530 KCNQ3O43525 872 aa33.34■■■□□ 2.93
PTPMT1-203ENST00000426530 DPEP1P16444 411 aa33.34■■■□□ 2.93
PTPMT1-203ENST00000426530 TGFB2P61812 414 aa33.34■■■□□ 2.93
PTPMT1-203ENST00000426530 FCHSD2O94868 740 aa33.33■■■□□ 2.93
PTPMT1-203ENST00000426530 MCM10Q7L590 875 aa33.33■■■□□ 2.93
PTPMT1-203ENST00000426530 ATP10DQ9P241 1426 aa33.31■■■□□ 2.92
PTPMT1-203ENST00000426530 AFDNP55196 1824 aaKnown RBP33.31■■■□□ 2.92
PTPMT1-203ENST00000426530 POLRMTO00411 1230 aaKnown RBP33.31■■■□□ 2.92
PTPMT1-203ENST00000426530 NARFQ9UHQ1 456 aa33.31■■■□□ 2.92
PTPMT1-203ENST00000426530 BCS1LQ9Y276 419 aa33.31■■■□□ 2.92
PTPMT1-203ENST00000426530 BTBD11A6QL63 1104 aa33.3■■■□□ 2.92
PTPMT1-203ENST00000426530 STARD3NLO95772 234 aa33.3■■■□□ 2.92
PTPMT1-203ENST00000426530 DCTN1Q14203 1278 aa33.3■■■□□ 2.92
PTPMT1-203ENST00000426530 TM4SF1P30408 202 aa33.29■■■□□ 2.92
PTPMT1-203ENST00000426530 BCL2L12Q9HB09 334 aa33.29■■■□□ 2.92
PTPMT1-203ENST00000426530 RTF1Q92541 710 aaKnown RBP33.28■■■□□ 2.92
PTPMT1-203ENST00000426530 FMNL2Q96PY5 1086 aa33.28■■■□□ 2.92
PTPMT1-203ENST00000426530 ADCY9O60503 1353 aa33.27■■■□□ 2.92
PTPMT1-203ENST00000426530 NFIXQ14938 502 aa33.27■■■□□ 2.92
PTPMT1-203ENST00000426530 ZNF330Q9Y3S2 320 aaPredicted RBP33.27■■■□□ 2.92
PTPMT1-203ENST00000426530 DLG5Q8TDM6 1919 aa33.27■■■□□ 2.92
PTPMT1-203ENST00000426530 KCNA3P22001 575 aa33.25■■■□□ 2.91
PTPMT1-203ENST00000426530 EIF5P55010 431 aaKnown RBP33.25■■■□□ 2.91
PTPMT1-203ENST00000426530 SCN7AQ01118 1682 aa33.25■■■□□ 2.91
PTPMT1-203ENST00000426530 GIGYF1O75420 1035 aaPredicted RBP33.24■■■□□ 2.91
PTPMT1-203ENST00000426530 NRXN2Q9P2S2 1712 aa33.23■■■□□ 2.91
PTPMT1-203ENST00000426530 CHRNA5P30532 468 aa33.23■■■□□ 2.91
PTPMT1-203ENST00000426530 A1BGP04217 495 aa33.22■■■□□ 2.91
PTPMT1-203ENST00000426530 ZNF526Q8TF50 670 aaPredicted RBP33.22■■■□□ 2.91
PTPMT1-203ENST00000426530 TEX13AQ9BXU3 409 aaPredicted RBP33.22■■■□□ 2.91
PTPMT1-203ENST00000426530 ARFGEF1Q9Y6D6 1849 aa33.22■■■□□ 2.91
PTPMT1-203ENST00000426530 PRAMEF22A3QJZ6 481 aa33.21■■■□□ 2.91
PTPMT1-203ENST00000426530 C1QTNF8P60827 252 aa33.21■■■□□ 2.91
PTPMT1-203ENST00000426530 BICDL1Q6ZP65 573 aa33.2■■■□□ 2.91
PTPMT1-203ENST00000426530 PIP4K2AP48426 406 aaPredicted RBP33.19■■■□□ 2.9
PTPMT1-203ENST00000426530 TBC1D2BQ9UPU7 963 aa33.19■■■□□ 2.9
PTPMT1-203ENST00000426530 DDX10Q13206 875 aaKnown RBP33.18■■■□□ 2.9
PTPMT1-203ENST00000426530 USP16Q9Y5T5 823 aa33.18■■■□□ 2.9
PTPMT1-203ENST00000426530 A0A087WZG4 1122 aa33.17■■■□□ 2.9
PTPMT1-203ENST00000426530 SERPINB2P05120 415 aa33.17■■■□□ 2.9
PTPMT1-203ENST00000426530 ARHGAP27Q6ZUM4 889 aa33.17■■■□□ 2.9
PTPMT1-203ENST00000426530 PIM2Q9P1W9 311 aa33.17■■■□□ 2.9
PTPMT1-203ENST00000426530 HTATSF1O43719 755 aaKnown RBP33.16■■■□□ 2.9
PTPMT1-203ENST00000426530 IL6STP40189 918 aaPredicted RBP33.16■■■□□ 2.9
PTPMT1-203ENST00000426530 PLEKHF1Q96S99 279 aa33.16■■■□□ 2.9
PTPMT1-203ENST00000426530 CARMIL3Q8ND23 1372 aa33.16■■■□□ 2.9
PTPMT1-203ENST00000426530 NEFMP07197 916 aa33.15■■■□□ 2.9
PTPMT1-203ENST00000426530 TBC1D9BQ66K14 1250 aa33.15■■■□□ 2.9
PTPMT1-203ENST00000426530 BCORQ6W2J9 1755 aa33.15■■■□□ 2.9
PTPMT1-203ENST00000426530 GPBP1L1Q9HC44 474 aaPredicted RBP33.14■■■□□ 2.9
PTPMT1-203ENST00000426530 MIS18AQ9NYP9 233 aa33.14■■■□□ 2.9
PTPMT1-203ENST00000426530 DLEC1Q9Y238 1755 aa33.12■■■□□ 2.89
PTPMT1-203ENST00000426530 DALRD3Q5D0E6 543 aaKnown RBP33.12■■■□□ 2.89
PTPMT1-203ENST00000426530 THUMPD2Q9BTF0 503 aaKnown RBP33.11■■■□□ 2.89
PTPMT1-203ENST00000426530 KDM3BQ7LBC6 1761 aa33.11■■■□□ 2.89
PTPMT1-203ENST00000426530 ANKRD31Q8N7Z5 1873 aa33.1■■■□□ 2.89
PTPMT1-203ENST00000426530 SENP3-EIF4A1A0A087X0R7 540 aa33.1■■■□□ 2.89
PTPMT1-203ENST00000426530 SNRPA1P09661 255 aaKnown RBP33.1■■■□□ 2.89
PTPMT1-203ENST00000426530 RALBP1Q15311 655 aa33.1■■■□□ 2.89
PTPMT1-203ENST00000426530 TAF7Q15545 349 aaPredicted RBP33.1■■■□□ 2.89
PTPMT1-203ENST00000426530 LAMB4A4D0S4 1761 aa33.09■■■□□ 2.89
PTPMT1-203ENST00000426530 NFE2L2Q16236 605 aa33.09■■■□□ 2.89
PTPMT1-203ENST00000426530 NPM2Q86SE8 214 aaKnown RBP33.09■■■□□ 2.89
PTPMT1-203ENST00000426530 MAPK8IP3Q9UPT6 1336 aa33.08■■■□□ 2.89
PTPMT1-203ENST00000426530 CAMTA2O94983 1202 aa33.08■■■□□ 2.89
PTPMT1-203ENST00000426530 DZIP3Q86Y13 1208 aaKnown RBP33.08■■■□□ 2.89
PTPMT1-203ENST00000426530 CCDC24Q8N4L8 307 aa33.08■■■□□ 2.89
PTPMT1-203ENST00000426530 C2CD5Q86YS7 1000 aa33.04■■■□□ 2.88
PTPMT1-203ENST00000426530 COL11A2P13942 1736 aaPredicted RBP33.04■■■□□ 2.88
PTPMT1-203ENST00000426530 NBPF26B4DH59 902 aa33.03■■■□□ 2.88
PTPMT1-203ENST00000426530 NBPF10Q6P3W6 841 aaKnown RBP33.03■■■□□ 2.88
PTPMT1-203ENST00000426530 NBPF15Q8N660 670 aa33.03■■■□□ 2.88
PTPMT1-203ENST00000426530 PRR5LQ6MZQ0 368 aa33.02■■■□□ 2.88
PTPMT1-203ENST00000426530 C9orf131Q5VYM1 1079 aa33.01■■■□□ 2.87
PTPMT1-203ENST00000426530 PNNQ9H307 717 aaKnown RBP33.01■■■□□ 2.87
PTPMT1-203ENST00000426530 MYBBP1AQ9BQG0 1328 aaKnown RBP33.01■■■□□ 2.87
PTPMT1-203ENST00000426530 SBF1O95248 1867 aa33■■■□□ 2.87
PTPMT1-203ENST00000426530 SETDB2Q96T68 719 aa32.99■■■□□ 2.87
PTPMT1-203ENST00000426530 RASSF7Q02833 373 aa32.98■■■□□ 2.87
PTPMT1-203ENST00000426530 PNISRQ8TF01 805 aaKnown RBP32.98■■■□□ 2.87
PTPMT1-203ENST00000426530 H0YIN7 160 aa32.97■■■□□ 2.87
PTPMT1-203ENST00000426530 CNBD1Q8NA66 436 aa32.96■■■□□ 2.87
PTPMT1-203ENST00000426530 RNF181Q9P0P0 153 aa32.96■■■□□ 2.87
PTPMT1-203ENST00000426530 NPHP1O15259 732 aa32.95■■■□□ 2.87
PTPMT1-203ENST00000426530 EIF4A1P60842 406 aaKnown RBP32.95■■■□□ 2.87
PTPMT1-203ENST00000426530 TTLL6Q8N841 843 aa32.95■■■□□ 2.87
PTPMT1-203ENST00000426530 CACNA1SQ13698 1873 aa32.95■■■□□ 2.86
PTPMT1-203ENST00000426530 KIF3CO14782 793 aa32.94■■■□□ 2.86
PTPMT1-203ENST00000426530 CCDC146Q8IYE0 955 aa32.94■■■□□ 2.86
PTPMT1-203ENST00000426530 BRIP1Q9BX63 1249 aa32.94■■■□□ 2.86
PTPMT1-203ENST00000426530 RIPK4P57078 832 aa32.93■■■□□ 2.86
PTPMT1-203ENST00000426530 NGEFQ8N5V2 710 aa32.93■■■□□ 2.86
PTPMT1-203ENST00000426530 ZNF622Q969S3 477 aaKnown RBP eCLIP32.93■■■□□ 2.86
PTPMT1-203ENST00000426530 PDE6BP35913 854 aa32.92■■■□□ 2.86
PTPMT1-203ENST00000426530 RRP7AQ9Y3A4 280 aaKnown RBP32.92■■■□□ 2.86
PTPMT1-203ENST00000426530 ZNF652Q9Y2D9 606 aa32.91■■■□□ 2.86
PTPMT1-203ENST00000426530 TMPOP42166 694 aaKnown RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms