RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 TCERG1O14776 1098 aaKnown RBP10.46□□□□□ -0.73
MDC1-203ENST00000417033 IFNLR1Q8IU57 520 aaPredicted RBP10.46□□□□□ -0.73
MDC1-203ENST00000417033 TTC5Q8N0Z6 440 aa10.46□□□□□ -0.73
MDC1-203ENST00000417033 HEG1Q9ULI3 1381 aa10.46□□□□□ -0.74
MDC1-203ENST00000417033 ITPK1Q13572 414 aa10.45□□□□□ -0.74
MDC1-203ENST00000417033 DNAJC10Q8IXB1 793 aa10.45□□□□□ -0.74
MDC1-203ENST00000417033 NECTIN2Q92692 538 aa10.45□□□□□ -0.74
MDC1-203ENST00000417033 BABAM1Q9NWV8 329 aa10.45□□□□□ -0.74
MDC1-203ENST00000417033 TJP1Q07157 1748 aa10.44□□□□□ -0.74
MDC1-203ENST00000417033 LOC102724428A0A0B4J2F2 783 aa10.44□□□□□ -0.74
MDC1-203ENST00000417033 GIGYF1O75420 1035 aaPredicted RBP10.44□□□□□ -0.74
MDC1-203ENST00000417033 PRR29P0C7W0 189 aa10.44□□□□□ -0.74
MDC1-203ENST00000417033 PIP4K2AP48426 406 aaPredicted RBP10.44□□□□□ -0.74
MDC1-203ENST00000417033 SIK1P57059 783 aa10.44□□□□□ -0.74
MDC1-203ENST00000417033 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
MDC1-203ENST00000417033 FMNL2Q96PY5 1086 aa10.44□□□□□ -0.74
MDC1-203ENST00000417033 ZBTB47Q9UFB7 747 aaPredicted RBP10.44□□□□□ -0.74
MDC1-203ENST00000417033 USP16Q9Y5T5 823 aa10.44□□□□□ -0.74
MDC1-203ENST00000417033 VAMP4O75379 141 aa10.43□□□□□ -0.74
MDC1-203ENST00000417033 APBA3O96018 575 aa10.43□□□□□ -0.74
MDC1-203ENST00000417033 DEFB132Q7Z7B7 95 aa10.43□□□□□ -0.74
MDC1-203ENST00000417033 BCL2L13Q9BXK5 485 aa10.43□□□□□ -0.74
MDC1-203ENST00000417033 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
MDC1-203ENST00000417033 LRRC4BQ9NT99 713 aa10.43□□□□□ -0.74
MDC1-203ENST00000417033 ANXA1P04083 346 aa10.42□□□□□ -0.74
MDC1-203ENST00000417033 EIF2S2P20042 333 aaKnown RBP10.42□□□□□ -0.74
MDC1-203ENST00000417033 PROSER3Q2NL68 480 aa10.42□□□□□ -0.74
MDC1-203ENST00000417033 KLHL34Q8N239 644 aa10.42□□□□□ -0.74
MDC1-203ENST00000417033 LINC00116Q8NCU8 138 aa10.42□□□□□ -0.74
MDC1-203ENST00000417033 SMARCC1Q92922 1105 aaPredicted RBP10.42□□□□□ -0.74
MDC1-203ENST00000417033 LY75O60449 1722 aa10.41□□□□□ -0.74
MDC1-203ENST00000417033 SNRPA1P09661 255 aaKnown RBP10.41□□□□□ -0.74
MDC1-203ENST00000417033 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
MDC1-203ENST00000417033 EN1Q05925 392 aaPredicted RBP10.41□□□□□ -0.74
MDC1-203ENST00000417033 HDGFL1Q5TGJ6 251 aa10.41□□□□□ -0.74
MDC1-203ENST00000417033 SMIM5Q71RC9 77 aa10.41□□□□□ -0.74
MDC1-203ENST00000417033 CCNL1Q9UK58 526 aaPredicted RBP10.41□□□□□ -0.74
MDC1-203ENST00000417033 LAMB4A4D0S4 1761 aa10.41□□□□□ -0.74
MDC1-203ENST00000417033 NBPF26B4DH59 902 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 BCAR3O75815 825 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 A1BGP04217 495 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 CYP19A1P11511 503 aaPredicted RBP10.4□□□□□ -0.74
MDC1-203ENST00000417033 EZH2Q15910 746 aaKnown RBP10.4□□□□□ -0.74
MDC1-203ENST00000417033 TXNRD1Q16881 649 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 NBPF14Q5TI25 921 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 NBPF10Q6P3W6 841 aaKnown RBP10.4□□□□□ -0.74
MDC1-203ENST00000417033 NBPF15Q8N660 670 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 SSH1Q8WYL5 1049 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 CHPF2Q9P2E5 772 aa10.4□□□□□ -0.74
MDC1-203ENST00000417033 CICQ96RK0 1608 aaPredicted RBP10.4□□□□□ -0.75
MDC1-203ENST00000417033 HOXB7P09629 217 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 RARSP54136 660 aaKnown RBP10.39□□□□□ -0.75
MDC1-203ENST00000417033 PDIA6Q15084 440 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 G2E3Q7L622 706 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 AMIGO3Q86WK7 504 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 UPF1Q92900 1129 aaKnown RBP eCLIP10.39□□□□□ -0.75
MDC1-203ENST00000417033 CAMKK2Q96RR4 588 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 RCAN3Q9UKA8 241 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 TNNQ9UQP3 1299 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 ZBTB1Q9Y2K1 713 aa10.39□□□□□ -0.75
MDC1-203ENST00000417033 COL5A3P25940 1745 aaPredicted RBP10.38□□□□□ -0.75
MDC1-203ENST00000417033 PLSCR1O15162 318 aa10.38□□□□□ -0.75
MDC1-203ENST00000417033 CRKLP46109 303 aaKnown RBP10.38□□□□□ -0.75
MDC1-203ENST00000417033 INTS5Q6P9B9 1019 aaKnown RBP10.38□□□□□ -0.75
MDC1-203ENST00000417033 LRP10Q7Z4F1 713 aa10.38□□□□□ -0.75
MDC1-203ENST00000417033 VSIG10Q8N0Z9 540 aa10.38□□□□□ -0.75
MDC1-203ENST00000417033 MRPL50Q8N5N7 158 aaKnown RBP10.38□□□□□ -0.75
MDC1-203ENST00000417033 MYH14Q7Z406 1995 aaKnown RBP10.37□□□□□ -0.75
MDC1-203ENST00000417033 MYL6BP14649 208 aa10.37□□□□□ -0.75
MDC1-203ENST00000417033 CANXP27824 592 aaKnown RBP10.37□□□□□ -0.75
MDC1-203ENST00000417033 ZNF827Q17R98 1081 aa10.37□□□□□ -0.75
MDC1-203ENST00000417033 PHAXQ9H814 394 aaKnown RBP10.37□□□□□ -0.75
MDC1-203ENST00000417033 ANO8Q9HCE9 1232 aaPredicted RBP10.37□□□□□ -0.75
MDC1-203ENST00000417033 SMC4Q9NTJ3 1288 aa10.37□□□□□ -0.75
MDC1-203ENST00000417033 TAF1LQ8IZX4 1826 aa10.37□□□□□ -0.75
MDC1-203ENST00000417033 ZNF831Q5JPB2 1677 aa10.37□□□□□ -0.75
MDC1-203ENST00000417033 RREB1Q92766 1687 aa10.37□□□□□ -0.75
MDC1-203ENST00000417033 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
MDC1-203ENST00000417033 PLIN1O60240 522 aa10.36□□□□□ -0.75
MDC1-203ENST00000417033 CT47B1P0C2W7 299 aaPredicted RBP10.36□□□□□ -0.75
MDC1-203ENST00000417033 BAG6P46379 1132 aa10.36□□□□□ -0.75
MDC1-203ENST00000417033 SF3B2Q13435 895 aaKnown RBP10.36□□□□□ -0.75
MDC1-203ENST00000417033 CCDC30Q5VVM6 783 aa10.36□□□□□ -0.75
MDC1-203ENST00000417033 SPOCK2Q92563 424 aa10.36□□□□□ -0.75
MDC1-203ENST00000417033 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
MDC1-203ENST00000417033 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
MDC1-203ENST00000417033 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
MDC1-203ENST00000417033 RGPD4Q7Z3J3 1758 aa10.36□□□□□ -0.75
MDC1-203ENST00000417033 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
MDC1-203ENST00000417033 CNTNAP4Q9C0A0 1308 aa10.35□□□□□ -0.75
MDC1-203ENST00000417033 STARD3NLO95772 234 aa10.35□□□□□ -0.75
MDC1-203ENST00000417033 SLC27A3Q5K4L6 730 aa10.35□□□□□ -0.75
MDC1-203ENST00000417033 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
MDC1-203ENST00000417033 DDX21Q9NR30 783 aaKnown RBP eCLIP10.35□□□□□ -0.75
MDC1-203ENST00000417033 NUP188Q5SRE5 1749 aa10.35□□□□□ -0.75
MDC1-203ENST00000417033 GNPATO15228 680 aa10.34□□□□□ -0.75
MDC1-203ENST00000417033 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
MDC1-203ENST00000417033 AIMP1Q12904 312 aaKnown RBP10.34□□□□□ -0.75
MDC1-203ENST00000417033 ALDH1L2Q3SY69 923 aa10.34□□□□□ -0.75
MDC1-203ENST00000417033 TTLL7Q6ZT98 887 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms