RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 MYH16Q9H6N6 1097 aa15.49■□□□□ 0.07
ATG4B-207ENST00000415107 FANCIQ9NVI1 1328 aa15.48■□□□□ 0.07
ATG4B-207ENST00000415107 E9PSI1 815 aa15.48■□□□□ 0.07
ATG4B-207ENST00000415107 GOLGA2Q08379 1002 aa15.48■□□□□ 0.07
ATG4B-207ENST00000415107 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
ATG4B-207ENST00000415107 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
ATG4B-207ENST00000415107 RPS6KA4O75676 772 aa15.47■□□□□ 0.07
ATG4B-207ENST00000415107 INTS5Q6P9B9 1019 aaKnown RBP15.47■□□□□ 0.07
ATG4B-207ENST00000415107 TRMT2AQ8IZ69 625 aaKnown RBP15.47■□□□□ 0.07
ATG4B-207ENST00000415107 AK7Q96M32 723 aa15.47■□□□□ 0.07
ATG4B-207ENST00000415107 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
ATG4B-207ENST00000415107 PNPLA7Q6ZV29 1317 aa15.46■□□□□ 0.07
ATG4B-207ENST00000415107 C4AP0C0L4 1744 aa15.46■□□□□ 0.07
ATG4B-207ENST00000415107 IL6STP40189 918 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-207ENST00000415107 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-207ENST00000415107 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
ATG4B-207ENST00000415107 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.07
ATG4B-207ENST00000415107 USP16Q9Y5T5 823 aa15.46■□□□□ 0.07
ATG4B-207ENST00000415107 PRAMEF22A3QJZ6 481 aa15.45■□□□□ 0.06
ATG4B-207ENST00000415107 GNPATO15228 680 aa15.45■□□□□ 0.06
ATG4B-207ENST00000415107 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
ATG4B-207ENST00000415107 SLFN5Q08AF3 891 aa15.45■□□□□ 0.06
ATG4B-207ENST00000415107 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
ATG4B-207ENST00000415107 TFCP2L1Q9NZI6 479 aa15.45■□□□□ 0.06
ATG4B-207ENST00000415107 ZBTB1Q9Y2K1 713 aa15.45■□□□□ 0.06
ATG4B-207ENST00000415107 RTCBQ9Y3I0 505 aaKnown RBP15.45■□□□□ 0.06
ATG4B-207ENST00000415107 RGL2O15211 777 aa15.44■□□□□ 0.06
ATG4B-207ENST00000415107 EIF5P55010 431 aaKnown RBP15.44■□□□□ 0.06
ATG4B-207ENST00000415107 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
ATG4B-207ENST00000415107 DUSP27Q5VZP5 1158 aa15.43■□□□□ 0.06
ATG4B-207ENST00000415107 COL15A1P39059 1388 aa15.43■□□□□ 0.06
ATG4B-207ENST00000415107 SCN7AQ01118 1682 aa15.43■□□□□ 0.06
ATG4B-207ENST00000415107 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
ATG4B-207ENST00000415107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.42■□□□□ 0.06
ATG4B-207ENST00000415107 CT47B1P0C2W7 299 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-207ENST00000415107 R3HDM1Q15032 1099 aaKnown RBP15.42■□□□□ 0.06
ATG4B-207ENST00000415107 KRT24Q2M2I5 525 aa15.42■□□□□ 0.06
ATG4B-207ENST00000415107 LRP10Q7Z4F1 713 aa15.42■□□□□ 0.06
ATG4B-207ENST00000415107 AMIGO3Q86WK7 504 aa15.42■□□□□ 0.06
ATG4B-207ENST00000415107 BCORQ6W2J9 1755 aa15.41■□□□□ 0.06
ATG4B-207ENST00000415107 TRAPPC3LQ5T215 181 aa15.41■□□□□ 0.06
ATG4B-207ENST00000415107 C8orf58Q8NAV2 365 aa15.41■□□□□ 0.06
ATG4B-207ENST00000415107 ZNF428Q96B54 188 aa15.41■□□□□ 0.06
ATG4B-207ENST00000415107 A0A087WZG4 1122 aa15.4■□□□□ 0.06
ATG4B-207ENST00000415107 NBPF26B4DH59 902 aa15.4■□□□□ 0.06
ATG4B-207ENST00000415107 A1BGP04217 495 aa15.4■□□□□ 0.06
ATG4B-207ENST00000415107 PDIA6Q15084 440 aa15.4■□□□□ 0.06
ATG4B-207ENST00000415107 TWISTNBQ3B726 338 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-207ENST00000415107 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
ATG4B-207ENST00000415107 NBPF10Q6P3W6 841 aaKnown RBP15.4■□□□□ 0.06
ATG4B-207ENST00000415107 COL23A1Q86Y22 540 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-207ENST00000415107 NBPF15Q8N660 670 aa15.4■□□□□ 0.06
ATG4B-207ENST00000415107 DDX21Q9NR30 783 aaKnown RBP eCLIP15.4■□□□□ 0.06
ATG4B-207ENST00000415107 CACNA1FO60840 1977 aa15.4■□□□□ 0.06
ATG4B-207ENST00000415107 LRP5O75197 1615 aa15.39■□□□□ 0.05
ATG4B-207ENST00000415107 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
ATG4B-207ENST00000415107 ARHGEF1Q92888 912 aaKnown RBP15.39■□□□□ 0.05
ATG4B-207ENST00000415107 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
ATG4B-207ENST00000415107 USP42Q9H9J4 1324 aaKnown RBP15.39■□□□□ 0.05
ATG4B-207ENST00000415107 VAMP4O75379 141 aa15.38■□□□□ 0.05
ATG4B-207ENST00000415107 CANXP27824 592 aaKnown RBP15.38■□□□□ 0.05
ATG4B-207ENST00000415107 EXOSC9Q06265 439 aaKnown RBP15.38■□□□□ 0.05
ATG4B-207ENST00000415107 CDCA7LQ96GN5 454 aa15.38■□□□□ 0.05
ATG4B-207ENST00000415107 MTFR1LQ9H019 292 aa15.38■□□□□ 0.05
ATG4B-207ENST00000415107 NARFQ9UHQ1 456 aa15.38■□□□□ 0.05
ATG4B-207ENST00000415107 PSDA5PKW4 1024 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-207ENST00000415107 CCDC30Q5VVM6 783 aa15.37■□□□□ 0.05
ATG4B-207ENST00000415107 RFC4P35249 363 aa15.36■□□□□ 0.05
ATG4B-207ENST00000415107 HYPKQ9NX55 129 aa15.36■□□□□ 0.05
ATG4B-207ENST00000415107 ERVV-1B6SEH8 477 aa15.35■□□□□ 0.05
ATG4B-207ENST00000415107 PHF14O94880 888 aa15.35■□□□□ 0.05
ATG4B-207ENST00000415107 EIF2S2P20042 333 aaKnown RBP15.35■□□□□ 0.05
ATG4B-207ENST00000415107 CLEC4GQ6UXB4 293 aa15.35■□□□□ 0.05
ATG4B-207ENST00000415107 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
ATG4B-207ENST00000415107 PDGFDQ9GZP0 370 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-207ENST00000415107 CHPF2Q9P2E5 772 aa15.35■□□□□ 0.05
ATG4B-207ENST00000415107 CAMTA2O94983 1202 aa15.34■□□□□ 0.05
ATG4B-207ENST00000415107 GYS1P13807 737 aa15.34■□□□□ 0.05
ATG4B-207ENST00000415107 NPM2Q86SE8 214 aaKnown RBP15.34■□□□□ 0.05
ATG4B-207ENST00000415107 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
ATG4B-207ENST00000415107 ELL2O00472 640 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-207ENST00000415107 PROSER3Q2NL68 480 aa15.33■□□□□ 0.04
ATG4B-207ENST00000415107 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
ATG4B-207ENST00000415107 DZIP3Q86Y13 1208 aaKnown RBP15.33■□□□□ 0.04
ATG4B-207ENST00000415107 BCL2L12Q9HB09 334 aa15.33■□□□□ 0.04
ATG4B-207ENST00000415107 ATP10DQ9P241 1426 aa15.33■□□□□ 0.04
ATG4B-207ENST00000415107 ZPR1O75312 459 aa15.32■□□□□ 0.04
ATG4B-207ENST00000415107 BRPF1P55201 1214 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-207ENST00000415107 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
ATG4B-207ENST00000415107 MAP3K15Q6ZN16 1313 aa15.32■□□□□ 0.04
ATG4B-207ENST00000415107 NRXN2Q9P2S2 1712 aa15.31■□□□□ 0.04
ATG4B-207ENST00000415107 MYL6BP14649 208 aa15.31■□□□□ 0.04
ATG4B-207ENST00000415107 PTGER2P43116 358 aa15.31■□□□□ 0.04
ATG4B-207ENST00000415107 PIP4K2AP48426 406 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-207ENST00000415107 SMIM5Q71RC9 77 aa15.31■□□□□ 0.04
ATG4B-207ENST00000415107 SPON1Q9HCB6 807 aa15.31■□□□□ 0.04
ATG4B-207ENST00000415107 ZNF652Q9Y2D9 606 aa15.31■□□□□ 0.04
ATG4B-207ENST00000415107 NUP98P52948 1817 aa15.3■□□□□ 0.04
ATG4B-207ENST00000415107 ANKRD36CQ5JPF3 1778 aa15.3■□□□□ 0.04
ATG4B-207ENST00000415107 USPL1Q5W0Q7 1092 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms