RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 EIF2S2P20042 333 aaKnown RBP23.83■■□□□ 1.41
CIRBP-202ENST00000413636 EN1Q05925 392 aaPredicted RBP23.83■■□□□ 1.41
CIRBP-202ENST00000413636 NECTIN2Q92692 538 aa23.83■■□□□ 1.41
CIRBP-202ENST00000413636 UPF1Q92900 1129 aaKnown RBP eCLIP23.83■■□□□ 1.41
CIRBP-202ENST00000413636 TAF1LQ8IZX4 1826 aa23.83■■□□□ 1.41
CIRBP-202ENST00000413636 SOS1Q07889 1333 aaPredicted RBP23.83■■□□□ 1.41
CIRBP-202ENST00000413636 SLC27A3Q5K4L6 730 aa23.82■■□□□ 1.4
CIRBP-202ENST00000413636 DEFB132Q7Z7B7 95 aa23.82■■□□□ 1.4
CIRBP-202ENST00000413636 PROM2Q8N271 834 aa23.82■■□□□ 1.4
CIRBP-202ENST00000413636 TEX13AQ9BXU3 409 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-202ENST00000413636 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
CIRBP-202ENST00000413636 COL5A3P25940 1745 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-202ENST00000413636 HDGFL1Q5TGJ6 251 aa23.81■■□□□ 1.4
CIRBP-202ENST00000413636 CAMKK2Q96RR4 588 aa23.81■■□□□ 1.4
CIRBP-202ENST00000413636 CYP19A1P11511 503 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-202ENST00000413636 EZH2Q15910 746 aaKnown RBP23.8■■□□□ 1.4
CIRBP-202ENST00000413636 LINC00116Q8NCU8 138 aa23.8■■□□□ 1.4
CIRBP-202ENST00000413636 STARD3NLO95772 234 aa23.79■■□□□ 1.4
CIRBP-202ENST00000413636 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
CIRBP-202ENST00000413636 A1BGP04217 495 aa23.77■■□□□ 1.4
CIRBP-202ENST00000413636 CCDC30Q5VVM6 783 aa23.77■■□□□ 1.4
CIRBP-202ENST00000413636 MYH14Q7Z406 1995 aaKnown RBP23.76■■□□□ 1.39
CIRBP-202ENST00000413636 RREB1Q92766 1687 aa23.76■■□□□ 1.39
CIRBP-202ENST00000413636 CRKLP46109 303 aaKnown RBP23.76■■□□□ 1.39
CIRBP-202ENST00000413636 ZNF428Q96B54 188 aa23.76■■□□□ 1.39
CIRBP-202ENST00000413636 CHMP4AQ9BY43 222 aa23.76■■□□□ 1.39
CIRBP-202ENST00000413636 PIP4K2AP48426 406 aaPredicted RBP23.75■■□□□ 1.39
CIRBP-202ENST00000413636 CHPF2Q9P2E5 772 aa23.75■■□□□ 1.39
CIRBP-202ENST00000413636 C4BP0C0L5 1744 aa23.75■■□□□ 1.39
CIRBP-202ENST00000413636 PLIN1O60240 522 aa23.74■■□□□ 1.39
CIRBP-202ENST00000413636 RARSP54136 660 aaKnown RBP23.74■■□□□ 1.39
CIRBP-202ENST00000413636 INTS5Q6P9B9 1019 aaKnown RBP23.73■■□□□ 1.39
CIRBP-202ENST00000413636 SSH1Q8WYL5 1049 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 BCL2L13Q9BXK5 485 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 STK31Q9BXU1 1019 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 CCDC87Q9NVE4 849 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 NBPF26B4DH59 902 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 ANXA1P04083 346 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 NBPF14Q5TI25 921 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 NBPF10Q6P3W6 841 aaKnown RBP23.73■■□□□ 1.39
CIRBP-202ENST00000413636 NBPF15Q8N660 670 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 ZBTB1Q9Y2K1 713 aa23.73■■□□□ 1.39
CIRBP-202ENST00000413636 ERBB4Q15303 1308 aa23.72■■□□□ 1.39
CIRBP-202ENST00000413636 CNTNAP4Q9C0A0 1308 aa23.72■■□□□ 1.39
CIRBP-202ENST00000413636 CACNA1FO60840 1977 aa23.72■■□□□ 1.39
CIRBP-202ENST00000413636 CANXP27824 592 aaKnown RBP23.72■■□□□ 1.39
CIRBP-202ENST00000413636 PDIA6Q15084 440 aa23.72■■□□□ 1.39
CIRBP-202ENST00000413636 PROSER3Q2NL68 480 aa23.72■■□□□ 1.39
CIRBP-202ENST00000413636 ALDH1L2Q3SY69 923 aa23.72■■□□□ 1.39
CIRBP-202ENST00000413636 DBF4Q9UBU7 674 aaPredicted RBP23.72■■□□□ 1.39
CIRBP-202ENST00000413636 NUP188Q5SRE5 1749 aa23.71■■□□□ 1.39
CIRBP-202ENST00000413636 BCAR3O75815 825 aa23.71■■□□□ 1.39
CIRBP-202ENST00000413636 MYL6BP14649 208 aa23.71■■□□□ 1.39
CIRBP-202ENST00000413636 EXOC6Q8TAG9 804 aa23.71■■□□□ 1.39
CIRBP-202ENST00000413636 CCDC136Q96JN2 1154 aa23.71■■□□□ 1.39
CIRBP-202ENST00000413636 DDX21Q9NR30 783 aaKnown RBP eCLIP23.71■■□□□ 1.39
CIRBP-202ENST00000413636 SMC4Q9NTJ3 1288 aa23.71■■□□□ 1.39
CIRBP-202ENST00000413636 SLC4A2P04920 1241 aa23.7■■□□□ 1.39
CIRBP-202ENST00000413636 RC3H1Q5TC82 1133 aaKnown RBP23.7■■□□□ 1.39
CIRBP-202ENST00000413636 HMGB2P26583 209 aaKnown RBP23.7■■□□□ 1.38
CIRBP-202ENST00000413636 PDE3AQ14432 1141 aa23.7■■□□□ 1.38
CIRBP-202ENST00000413636 B4GALNT3Q6L9W6 998 aa23.69■■□□□ 1.38
CIRBP-202ENST00000413636 MRPL50Q8N5N7 158 aaKnown RBP23.69■■□□□ 1.38
CIRBP-202ENST00000413636 AK7Q96M32 723 aa23.69■■□□□ 1.38
CIRBP-202ENST00000413636 ZNF330Q9Y3S2 320 aaPredicted RBP23.68■■□□□ 1.38
CIRBP-202ENST00000413636 GNPATO15228 680 aa23.67■■□□□ 1.38
CIRBP-202ENST00000413636 HYPKQ9NX55 129 aa23.67■■□□□ 1.38
CIRBP-202ENST00000413636 LRP10Q7Z4F1 713 aa23.66■■□□□ 1.38
CIRBP-202ENST00000413636 CRBNQ96SW2 442 aa23.66■■□□□ 1.38
CIRBP-202ENST00000413636 PHAXQ9H814 394 aaKnown RBP23.66■■□□□ 1.38
CIRBP-202ENST00000413636 UBR3Q6ZT12 1888 aa23.66■■□□□ 1.38
CIRBP-202ENST00000413636 RPS6KA4O75676 772 aa23.66■■□□□ 1.38
CIRBP-202ENST00000413636 IL6STP40189 918 aaPredicted RBP23.66■■□□□ 1.38
CIRBP-202ENST00000413636 ZNF827Q17R98 1081 aa23.66■■□□□ 1.38
CIRBP-202ENST00000413636 G2E3Q7L622 706 aa23.66■■□□□ 1.38
CIRBP-202ENST00000413636 AKT1S1Q96B36 256 aa23.66■■□□□ 1.38
CIRBP-202ENST00000413636 EIF5P55010 431 aaKnown RBP23.64■■□□□ 1.38
CIRBP-202ENST00000413636 SMIM5Q71RC9 77 aa23.64■■□□□ 1.38
CIRBP-202ENST00000413636 AMIGO3Q86WK7 504 aa23.64■■□□□ 1.38
CIRBP-202ENST00000413636 ANO8Q9HCE9 1232 aaPredicted RBP23.64■■□□□ 1.38
CIRBP-202ENST00000413636 RTCBQ9Y3I0 505 aaKnown RBP23.64■■□□□ 1.38
CIRBP-202ENST00000413636 MS4A1P11836 297 aa23.63■■□□□ 1.37
CIRBP-202ENST00000413636 BRPF1P55201 1214 aaPredicted RBP23.63■■□□□ 1.37
CIRBP-202ENST00000413636 AIMP1Q12904 312 aaKnown RBP23.63■■□□□ 1.37
CIRBP-202ENST00000413636 XAGE3Q8WTP9 111 aa23.63■■□□□ 1.37
CIRBP-202ENST00000413636 TUBGCP6Q96RT7 1819 aa23.63■■□□□ 1.37
CIRBP-202ENST00000413636 C20orf194Q5TEA3 1177 aa23.62■■□□□ 1.37
CIRBP-202ENST00000413636 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
CIRBP-202ENST00000413636 PHF14O94880 888 aa23.62■■□□□ 1.37
CIRBP-202ENST00000413636 FLIIQ13045 1269 aa23.62■■□□□ 1.37
CIRBP-202ENST00000413636 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
CIRBP-202ENST00000413636 TFCP2L1Q9NZI6 479 aa23.62■■□□□ 1.37
CIRBP-202ENST00000413636 COL15A1P39059 1388 aa23.62■■□□□ 1.37
CIRBP-202ENST00000413636 STK32BQ9NY57 414 aa23.61■■□□□ 1.37
CIRBP-202ENST00000413636 NOB1Q9ULX3 412 aaKnown RBP23.61■■□□□ 1.37
CIRBP-202ENST00000413636 KIF16BQ96L93 1317 aa23.6■■□□□ 1.37
CIRBP-202ENST00000413636 AAMPQ13685 434 aa23.6■■□□□ 1.37
CIRBP-202ENST00000413636 SLC15A2Q16348 729 aa23.6■■□□□ 1.37
CIRBP-202ENST00000413636 TTLL7Q6ZT98 887 aa23.6■■□□□ 1.37
CIRBP-202ENST00000413636 FRAT1Q92837 279 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms