RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SRGAP3O43295 1099 aa16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 ERLIN1O75477 346 aa16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 KIAA1524Q8TCG1 905 aa16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 STK38Q15208 465 aa16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 JARID2Q92833 1246 aaPredicted RBP16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 DISP1Q96F81 1524 aa16.33■□□□□ 0.2
CLTCL1-201ENST00000412649 CHMLP26374 656 aa16.32■□□□□ 0.2
CLTCL1-201ENST00000412649 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.32■□□□□ 0.2
CLTCL1-201ENST00000412649 CPLX1O14810 134 aa16.32■□□□□ 0.2
CLTCL1-201ENST00000412649 KIF1BPQ96EK5 621 aa16.32■□□□□ 0.2
CLTCL1-201ENST00000412649 AK2P54819 239 aa16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 MCM10Q7L590 875 aa16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 FAM83GA6ND36 823 aa16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 FYB1O15117 783 aa16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 GLRX3O76003 335 aaKnown RBP16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 HDGFP51858 240 aaKnown RBP16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 GTF3C6Q969F1 213 aa16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 HOOK1Q9UJC3 728 aaKnown RBP16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 CBFA2T2O43439 604 aa16.31■□□□□ 0.2
CLTCL1-201ENST00000412649 PTPRTO14522 1441 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 RRS1Q15050 365 aaKnown RBP16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 CCDC70Q6NSX1 233 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 LMAN1P49257 510 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 ELF2Q15723 593 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 ZSCAN12O43309 604 aa16.3■□□□□ 0.2
CLTCL1-201ENST00000412649 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 LRRFIP2Q9Y608 721 aaKnown RBP16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 NECAB1Q8N987 351 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 ZNF75DP51815 510 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
CLTCL1-201ENST00000412649 MIS18AQ9NYP9 233 aa16.28■□□□□ 0.2
CLTCL1-201ENST00000412649 CCDC9Q9Y3X0 531 aaKnown RBP16.28■□□□□ 0.2
CLTCL1-201ENST00000412649 ABCC4O15439 1325 aa16.28■□□□□ 0.2
CLTCL1-201ENST00000412649 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
CLTCL1-201ENST00000412649 RASSF4Q9H2L5 321 aa16.28■□□□□ 0.2
CLTCL1-201ENST00000412649 SKIDA1Q1XH10 827 aa16.27■□□□□ 0.2
CLTCL1-201ENST00000412649 MAST1Q9Y2H9 1570 aa16.27■□□□□ 0.2
CLTCL1-201ENST00000412649 CYP2E1P05181 493 aaPredicted RBP16.27■□□□□ 0.2
CLTCL1-201ENST00000412649 CCDC102AQ96A19 550 aa16.27■□□□□ 0.2
CLTCL1-201ENST00000412649 PUS7Q96PZ0 661 aaKnown RBP16.27■□□□□ 0.2
CLTCL1-201ENST00000412649 CBX8Q9HC52 389 aa16.27■□□□□ 0.2
CLTCL1-201ENST00000412649 GTF2A1P52655 376 aaPredicted RBP16.27■□□□□ 0.19
CLTCL1-201ENST00000412649 LRMPQ12912 555 aa16.27■□□□□ 0.19
CLTCL1-201ENST00000412649 CFAP100Q494V2 611 aa16.27■□□□□ 0.19
CLTCL1-201ENST00000412649 ZSCAN25Q6NSZ9 544 aa16.27■□□□□ 0.19
CLTCL1-201ENST00000412649 PHF23Q9BUL5 403 aaPredicted RBP16.27■□□□□ 0.19
CLTCL1-201ENST00000412649 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.19
CLTCL1-201ENST00000412649 SYCP1Q15431 976 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 TSR1Q2NL82 804 aaKnown RBP16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 CPLX2Q6PUV4 134 aaKnown RBP16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 PLXNC1O60486 1568 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 H0YHG0 523 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 KRT32Q14532 448 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 PHACTR3Q96KR7 559 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 SPTLC3Q9NUV7 552 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 DNAI1Q9UI46 699 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 TUBB4AP04350 444 aa16.26■□□□□ 0.19
CLTCL1-201ENST00000412649 E9PCH4 1651 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 CASQ1P31415 396 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 NOC3LQ8WTT2 800 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 CUL4AQ13619 759 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 ARFGAP3Q9NP61 516 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 TEFQ10587 303 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 C10orf67Q8IYJ2 551 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 ZDHHC9Q9Y397 364 aa16.25■□□□□ 0.19
CLTCL1-201ENST00000412649 TRIM29Q14134 588 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 SYT10Q6XYQ8 523 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 AACSQ86V21 672 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 CCAR1Q8IX12 1150 aaKnown RBP16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 MSH6P52701 1360 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 TTLL5Q6EMB2 1281 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 FSIP1Q8NA03 581 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 NGDNQ8NEJ9 315 aaKnown RBP16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 SRRTQ9BXP5 876 aaKnown RBP16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 PALD1Q9ULE6 856 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 FBLN1P23142 703 aa16.24■□□□□ 0.19
CLTCL1-201ENST00000412649 USP8P40818 1118 aa16.23■□□□□ 0.19
CLTCL1-201ENST00000412649 NCBP1Q09161 790 aaKnown RBP16.23■□□□□ 0.19
CLTCL1-201ENST00000412649 CTR9Q6PD62 1173 aa16.23■□□□□ 0.19
CLTCL1-201ENST00000412649 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
CLTCL1-201ENST00000412649 ZFP91Q96JP5 570 aaPredicted RBP16.23■□□□□ 0.19
CLTCL1-201ENST00000412649 PES1O00541 588 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms