RNA–Protein interactions for RNA: ENST00000411612.5

GSE1-204, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-204ENST00000411612 DLG5Q8TDM6 1919 aa28.81■■■□□ 2.2
GSE1-204ENST00000411612 KCNQ3O43525 872 aa28.79■■■□□ 2.2
GSE1-204ENST00000411612 EIF5P55010 431 aaKnown RBP28.79■■■□□ 2.2
GSE1-204ENST00000411612 NARFQ9UHQ1 456 aa28.79■■■□□ 2.2
GSE1-204ENST00000411612 UTRNP46939 3433 aa28.78■■■□□ 2.2
GSE1-204ENST00000411612 ZPR1O75312 459 aa28.78■■■□□ 2.2
GSE1-204ENST00000411612 COL15A1P39059 1388 aa28.77■■■□□ 2.2
GSE1-204ENST00000411612 A0A087WZG4 1122 aa28.77■■■□□ 2.2
GSE1-204ENST00000411612 SNRPA1P09661 255 aaKnown RBP28.77■■■□□ 2.2
GSE1-204ENST00000411612 IL6STP40189 918 aaPredicted RBP28.76■■■□□ 2.19
GSE1-204ENST00000411612 WDR43Q15061 677 aaKnown RBP eCLIP28.76■■■□□ 2.195e-6■■■□□ 18.8
GSE1-204ENST00000411612 SRP68Q9UHB9 627 aaKnown RBP28.76■■■□□ 2.19
GSE1-204ENST00000411612 GOLGB1Q14789 3259 aaKnown RBP28.76■■■□□ 2.19
GSE1-204ENST00000411612 GPR162Q16538 588 aa28.75■■■□□ 2.19
GSE1-204ENST00000411612 PARP3Q9Y6F1 533 aa28.75■■■□□ 2.19
GSE1-204ENST00000411612 TM4SF1P30408 202 aa28.74■■■□□ 2.19
GSE1-204ENST00000411612 TMPOP42166 694 aaKnown RBP28.74■■■□□ 2.19
GSE1-204ENST00000411612 LMOD3Q0VAK6 560 aa28.74■■■□□ 2.19
GSE1-204ENST00000411612 FKBP8Q14318 412 aa28.74■■■□□ 2.19
GSE1-204ENST00000411612 CANXP27824 592 aaKnown RBP28.73■■■□□ 2.19
GSE1-204ENST00000411612 RIPK4P57078 832 aa28.73■■■□□ 2.19
GSE1-204ENST00000411612 RUNDC1Q96C34 613 aa28.73■■■□□ 2.19
GSE1-204ENST00000411612 BABAM1Q9NWV8 329 aa28.73■■■□□ 2.19
GSE1-204ENST00000411612 KIF13BQ9NQT8 1826 aa28.73■■■□□ 2.19
GSE1-204ENST00000411612 GRIN3BO60391 1043 aa28.72■■■□□ 2.19
GSE1-204ENST00000411612 TGFB2P61812 414 aa28.72■■■□□ 2.19
GSE1-204ENST00000411612 ADAMTS8Q9UP79 889 aa28.72■■■□□ 2.19
GSE1-204ENST00000411612 C10orf71Q711Q0 1435 aa28.71■■■□□ 2.19
GSE1-204ENST00000411612 USPL1Q5W0Q7 1092 aa28.71■■■□□ 2.19
GSE1-204ENST00000411612 USP16Q9Y5T5 823 aa28.7■■■□□ 2.18
GSE1-204ENST00000411612 YY1P25490 414 aa28.69■■■□□ 2.18
GSE1-204ENST00000411612 KDM3BQ7LBC6 1761 aa28.68■■■□□ 2.18
GSE1-204ENST00000411612 A1BGP04217 495 aa28.68■■■□□ 2.18
GSE1-204ENST00000411612 BCL2L12Q9HB09 334 aa28.68■■■□□ 2.18
GSE1-204ENST00000411612 DDR1Q08345 913 aa28.67■■■□□ 2.18
GSE1-204ENST00000411612 MIS18AQ9NYP9 233 aa28.67■■■□□ 2.18
GSE1-204ENST00000411612 POLRMTO00411 1230 aaKnown RBP28.66■■■□□ 2.18
GSE1-204ENST00000411612 EIF4A1P60842 406 aaKnown RBP28.66■■■□□ 2.18
GSE1-204ENST00000411612 THUMPD2Q9BTF0 503 aaKnown RBP28.66■■■□□ 2.18
GSE1-204ENST00000411612 RGL2O15211 777 aa28.65■■■□□ 2.18
GSE1-204ENST00000411612 YBX3P16989 372 aaKnown RBP eCLIP28.65■■■□□ 2.181e-13■□□□□ 10
GSE1-204ENST00000411612 NPM2Q86SE8 214 aaKnown RBP28.65■■■□□ 2.18
GSE1-204ENST00000411612 CHD4Q14839 1912 aa28.65■■■□□ 2.18
GSE1-204ENST00000411612 GIGYF1O75420 1035 aaPredicted RBP28.64■■■□□ 2.18
GSE1-204ENST00000411612 NFIXQ14938 502 aa28.64■■■□□ 2.18
GSE1-204ENST00000411612 PRAMEF22A3QJZ6 481 aa28.63■■■□□ 2.17
GSE1-204ENST00000411612 CCDC146Q8IYE0 955 aa28.63■■■□□ 2.17
GSE1-204ENST00000411612 PXDNLA1KZ92 1463 aa28.63■■■□□ 2.17
GSE1-204ENST00000411612 PELP1Q8IZL8 1130 aaKnown RBP28.62■■■□□ 2.17
GSE1-204ENST00000411612 KIAA1551Q9HCM1 1747 aa28.61■■■□□ 2.17
GSE1-204ENST00000411612 TRIM35Q9UPQ4 493 aa28.6■■■□□ 2.17
GSE1-204ENST00000411612 SCN7AQ01118 1682 aa28.59■■■□□ 2.17
GSE1-204ENST00000411612 CAMTA2O94983 1202 aa28.59■■■□□ 2.17
GSE1-204ENST00000411612 CLEC4GQ6UXB4 293 aa28.59■■■□□ 2.17
GSE1-204ENST00000411612 TSPYL4Q9UJ04 414 aa28.59■■■□□ 2.17
GSE1-204ENST00000411612 TBC1D2BQ9UPU7 963 aa28.59■■■□□ 2.17
GSE1-204ENST00000411612 NRXN2Q9P2S2 1712 aa28.59■■■□□ 2.17
GSE1-204ENST00000411612 LAMB4A4D0S4 1761 aa28.58■■■□□ 2.17
GSE1-204ENST00000411612 NBPF26B4DH59 902 aa28.58■■■□□ 2.17
GSE1-204ENST00000411612 NBPF10Q6P3W6 841 aaKnown RBP28.58■■■□□ 2.17
GSE1-204ENST00000411612 NBPF15Q8N660 670 aa28.58■■■□□ 2.17
GSE1-204ENST00000411612 DZIP3Q86Y13 1208 aaKnown RBP28.57■■■□□ 2.16
GSE1-204ENST00000411612 RRP7AQ9Y3A4 280 aaKnown RBP28.57■■■□□ 2.16
GSE1-204ENST00000411612 CHL1O00533 1208 aa28.56■■■□□ 2.16
GSE1-204ENST00000411612 ANP32CO43423 234 aa28.56■■■□□ 2.16
GSE1-204ENST00000411612 SERPINB2P05120 415 aa28.56■■■□□ 2.16
GSE1-204ENST00000411612 ERBB4Q15303 1308 aa28.56■■■□□ 2.16
GSE1-204ENST00000411612 ZNF330Q9Y3S2 320 aaPredicted RBP28.56■■■□□ 2.16
GSE1-204ENST00000411612 A0A0G2JLW4 131 aa28.55■■■□□ 2.16
GSE1-204ENST00000411612 DPEP1P16444 411 aa28.55■■■□□ 2.16
GSE1-204ENST00000411612 KCNA3P22001 575 aa28.55■■■□□ 2.16
GSE1-204ENST00000411612 NEUROD2Q15784 382 aa28.55■■■□□ 2.16
GSE1-204ENST00000411612 TBC1D9BQ66K14 1250 aa28.54■■■□□ 2.16
GSE1-204ENST00000411612 ZNF652Q9Y2D9 606 aa28.53■■■□□ 2.16
GSE1-204ENST00000411612 AFDNP55196 1824 aaKnown RBP28.53■■■□□ 2.16
GSE1-204ENST00000411612 BCORQ6W2J9 1755 aa28.52■■■□□ 2.16
GSE1-204ENST00000411612 CARMIL3Q8ND23 1372 aa28.52■■■□□ 2.16
GSE1-204ENST00000411612 N4BP2Q86UW6 1770 aaPredicted RBP28.52■■■□□ 2.16
GSE1-204ENST00000411612 SETDB2Q96T68 719 aa28.51■■■□□ 2.15
GSE1-204ENST00000411612 PIM2Q9P1W9 311 aa28.51■■■□□ 2.15
GSE1-204ENST00000411612 APAF1O14727 1248 aa28.5■■■□□ 2.15
GSE1-204ENST00000411612 PIP4K2AP48426 406 aaPredicted RBP28.5■■■□□ 2.15
GSE1-204ENST00000411612 PDZRN3Q9UPQ7 1066 aa28.5■■■□□ 2.15
GSE1-204ENST00000411612 BRCA1P38398 1863 aaKnown RBP28.5■■■□□ 2.15
GSE1-204ENST00000411612 CALD1Q05682 793 aaKnown RBP28.49■■■□□ 2.15
GSE1-204ENST00000411612 CCDC184Q52MB2 194 aa28.49■■■□□ 2.15
GSE1-204ENST00000411612 NCBP3Q53F19 620 aaKnown RBP28.49■■■□□ 2.15
GSE1-204ENST00000411612 CFAP44Q96MT7 982 aa28.49■■■□□ 2.15
GSE1-204ENST00000411612 ERVV-1B6SEH8 477 aa28.48■■■□□ 2.15
GSE1-204ENST00000411612 BICDL1Q6ZP65 573 aa28.48■■■□□ 2.15
GSE1-204ENST00000411612 BRIP1Q9BX63 1249 aa28.46■■■□□ 2.15
GSE1-204ENST00000411612 BCS1LQ9Y276 419 aa28.46■■■□□ 2.15
GSE1-204ENST00000411612 HOXB7P09629 217 aa28.45■■■□□ 2.14
GSE1-204ENST00000411612 ZNF853P0CG23 659 aa28.45■■■□□ 2.14
GSE1-204ENST00000411612 DALRD3Q5D0E6 543 aaKnown RBP28.45■■■□□ 2.14
GSE1-204ENST00000411612 ZNF784Q8NCA9 323 aaPredicted RBP28.45■■■□□ 2.14
GSE1-204ENST00000411612 PRR5LQ6MZQ0 368 aa28.44■■■□□ 2.14
GSE1-204ENST00000411612 MRS2Q9HD23 443 aa28.43■■■□□ 2.14
GSE1-204ENST00000411612 ARFGEF1Q9Y6D6 1849 aa28.42■■■□□ 2.14
GSE1-204ENST00000411612 CHRNA5P30532 468 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms