RNA–Protein interactions for RNA: ENST00000407684.1

GAREM2-202, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 2 BASIC

Gene GAREM2, Length 5,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-202ENST00000407684 TRAK2O60296 914 aa20.79■□□□□ 0.92
GAREM2-202ENST00000407684 NBPF6Q5VWK0 638 aa20.79■□□□□ 0.92
GAREM2-202ENST00000407684 NBPF4Q96M43 638 aa20.79■□□□□ 0.92
GAREM2-202ENST00000407684 A0A0U1RQG5 324 aaPredicted RBP20.79■□□□□ 0.92
GAREM2-202ENST00000407684 RNMTO43148 476 aaKnown RBP20.79■□□□□ 0.92
GAREM2-202ENST00000407684 MRE11P49959 708 aa20.78■□□□□ 0.92
GAREM2-202ENST00000407684 RABEP1Q15276 862 aa20.78■□□□□ 0.92
GAREM2-202ENST00000407684 SPINK5Q9NQ38 1064 aaPredicted RBP20.78■□□□□ 0.92
GAREM2-202ENST00000407684 BTG4Q9NY30 223 aa20.78■□□□□ 0.92
GAREM2-202ENST00000407684 PCDH11XQ9BZA7 1347 aa20.78■□□□□ 0.92
GAREM2-202ENST00000407684 PCDH11YQ9BZA8 1340 aa20.78■□□□□ 0.92
GAREM2-202ENST00000407684 NEK4P51957 841 aa20.78■□□□□ 0.92
GAREM2-202ENST00000407684 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
GAREM2-202ENST00000407684 HIP1O00291 1037 aa20.77■□□□□ 0.92
GAREM2-202ENST00000407684 PHF23Q9BUL5 403 aaPredicted RBP20.77■□□□□ 0.92
GAREM2-202ENST00000407684 CEP170BQ9Y4F5 1589 aaPredicted RBP20.77■□□□□ 0.92
GAREM2-202ENST00000407684 TSR1Q2NL82 804 aaKnown RBP20.77■□□□□ 0.92
GAREM2-202ENST00000407684 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.76■□□□□ 0.91
GAREM2-202ENST00000407684 MROH2AA6NES4 1674 aa20.76■□□□□ 0.91
GAREM2-202ENST00000407684 IQGAP1P46940 1657 aa20.76■□□□□ 0.91
GAREM2-202ENST00000407684 FAM177BA6PVY3 158 aa20.76■□□□□ 0.91
GAREM2-202ENST00000407684 ADGRB1O14514 1584 aa20.76■□□□□ 0.91
GAREM2-202ENST00000407684 CDK12Q9NYV4 1490 aaPredicted RBP20.75■□□□□ 0.91
GAREM2-202ENST00000407684 DDB1Q16531 1140 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.75■□□□□ 0.91
GAREM2-202ENST00000407684 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 TPM1P09493 284 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 C8orf37Q96NL8 207 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 HOOK1Q9UJC3 728 aaKnown RBP20.75■□□□□ 0.91
GAREM2-202ENST00000407684 PPLO60437 1756 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 TPM2P07951 284 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 CDCA7Q9BWT1 371 aaPredicted RBP20.75■□□□□ 0.91
GAREM2-202ENST00000407684 MCM2P49736 904 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 ZNF771Q7L3S4 317 aaPredicted RBP20.75■□□□□ 0.91
GAREM2-202ENST00000407684 ARHGEF25Q86VW2 580 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 MYD88Q99836 296 aa20.75■□□□□ 0.91
GAREM2-202ENST00000407684 PDE4CQ08493 712 aa20.74■□□□□ 0.91
GAREM2-202ENST00000407684 SAFBQ15424 915 aaKnown RBP eCLIP20.74■□□□□ 0.91
GAREM2-202ENST00000407684 SASS6Q6UVJ0 657 aa20.74■□□□□ 0.91
GAREM2-202ENST00000407684 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
GAREM2-202ENST00000407684 CHL1O00533 1208 aa20.74■□□□□ 0.91
GAREM2-202ENST00000407684 HSP90AB3PQ58FF7 597 aa20.74■□□□□ 0.91
GAREM2-202ENST00000407684 FER1L4A9Z1Z3 1794 aa20.74■□□□□ 0.91
GAREM2-202ENST00000407684 FOSBP53539 338 aa20.74■□□□□ 0.91
GAREM2-202ENST00000407684 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.73■□□□□ 0.91
GAREM2-202ENST00000407684 NFATC2IPQ8NCF5 419 aa20.73■□□□□ 0.91
GAREM2-202ENST00000407684 CCDC47Q96A33 483 aaKnown RBP20.73■□□□□ 0.91
GAREM2-202ENST00000407684 NASPP49321 788 aaPredicted RBP20.73■□□□□ 0.91
GAREM2-202ENST00000407684 CCDC73Q6ZRK6 1079 aa20.73■□□□□ 0.91
GAREM2-202ENST00000407684 PLEKHF1Q96S99 279 aa20.73■□□□□ 0.91
GAREM2-202ENST00000407684 SLC39A6Q13433 755 aa20.73■□□□□ 0.91
GAREM2-202ENST00000407684 CCDC57Q2TAC2 916 aa20.73■□□□□ 0.91
GAREM2-202ENST00000407684 TECPR2O15040 1411 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 CHPF2Q9P2E5 772 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 ZNF652Q9Y2D9 606 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 MED14O60244 1454 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 PI4KAP2A4QPH2 592 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 DHX16O60231 1041 aaKnown RBP20.72■□□□□ 0.91
GAREM2-202ENST00000407684 PI4KAP1Q8N8J0 262 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 MAP3K2Q9Y2U5 619 aa20.72■□□□□ 0.91
GAREM2-202ENST00000407684 CDC42BPGQ6DT37 1551 aa20.71■□□□□ 0.91
GAREM2-202ENST00000407684 RAD21O60216 631 aa20.7■□□□□ 0.9
GAREM2-202ENST00000407684 IGSF1Q8N6C5 1336 aa20.7■□□□□ 0.9
GAREM2-202ENST00000407684 RAB11FIP3O75154 756 aa20.7■□□□□ 0.9
GAREM2-202ENST00000407684 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
GAREM2-202ENST00000407684 CAVIN1Q6NZI2 390 aaKnown RBP20.7■□□□□ 0.9
GAREM2-202ENST00000407684 SIL1Q9H173 461 aa20.69■□□□□ 0.9
GAREM2-202ENST00000407684 HOXB7P09629 217 aa20.69■□□□□ 0.9
GAREM2-202ENST00000407684 CTDP1Q9Y5B0 961 aaPredicted RBP20.69■□□□□ 0.9
GAREM2-202ENST00000407684 MBD3O95983 291 aa20.69■□□□□ 0.9
GAREM2-202ENST00000407684 ANKRD20A12PQ8NF67 263 aa20.69■□□□□ 0.9
GAREM2-202ENST00000407684 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
GAREM2-202ENST00000407684 LRRFIP2Q9Y608 721 aaKnown RBP20.69■□□□□ 0.9
GAREM2-202ENST00000407684 SF3B2Q13435 895 aaKnown RBP20.68■□□□□ 0.9
GAREM2-202ENST00000407684 RNF214Q8ND24 703 aa20.68■□□□□ 0.9
GAREM2-202ENST00000407684 CPSF1Q10570 1443 aaKnown RBP20.68■□□□□ 0.9
GAREM2-202ENST00000407684 DNAJC2Q99543 621 aaKnown RBP20.68■□□□□ 0.9
GAREM2-202ENST00000407684 KRT24Q2M2I5 525 aa20.68■□□□□ 0.9
GAREM2-202ENST00000407684 KIF1BPQ96EK5 621 aa20.68■□□□□ 0.9
GAREM2-202ENST00000407684 DIP2AQ14689 1571 aa20.68■□□□□ 0.9
GAREM2-202ENST00000407684 SMARCC1Q92922 1105 aaPredicted RBP20.67■□□□□ 0.9
GAREM2-202ENST00000407684 ANKRD13DQ6ZTN6 518 aa20.67■□□□□ 0.9
GAREM2-202ENST00000407684 EXOC6BQ9Y2D4 811 aa20.67■□□□□ 0.9
GAREM2-202ENST00000407684 PRPF40AO75400 957 aaKnown RBP20.67■□□□□ 0.9
GAREM2-202ENST00000407684 ANXA1P04083 346 aa20.67■□□□□ 0.9
GAREM2-202ENST00000407684 GPS2Q13227 327 aa20.67■□□□□ 0.9
GAREM2-202ENST00000407684 BRINP3Q76B58 766 aa20.67■□□□□ 0.9
GAREM2-202ENST00000407684 SETD1BQ9UPS6 1966 aaKnown RBP20.67■□□□□ 0.9
GAREM2-202ENST00000407684 PDCP20941 246 aa20.66■□□□□ 0.9
GAREM2-202ENST00000407684 SART3Q15020 963 aaKnown RBP20.65■□□□□ 0.9
GAREM2-202ENST00000407684 K7ELQ4 463 aaPredicted RBP20.65■□□□□ 0.9
GAREM2-202ENST00000407684 KSR2Q6VAB6 950 aa20.65■□□□□ 0.9
GAREM2-202ENST00000407684 HOMER1Q86YM7 354 aa20.65■□□□□ 0.9
GAREM2-202ENST00000407684 USP31Q70CQ4 1352 aa20.65■□□□□ 0.9
GAREM2-202ENST00000407684 KIAA0232Q92628 1395 aa20.65■□□□□ 0.9
GAREM2-202ENST00000407684 ALDH1L1O75891 902 aa20.65■□□□□ 0.9
GAREM2-202ENST00000407684 HDAC1Q13547 482 aaPredicted RBP20.65■□□□□ 0.9
GAREM2-202ENST00000407684 CCDC158Q5M9N0 1113 aa20.65■□□□□ 0.9
GAREM2-202ENST00000407684 LGR6Q9HBX8 967 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms