RNA–Protein interactions for RNA: ENST00000407417.7

NFIA-208, Transcript of nuclear factor I A, human

TSL 2 BASIC

Gene NFIA, Length 2,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFIA-208	ENST00000407417	NGEF	Q8N5V2	710 aa		10.51	□□□□□ -0.73
NFIA-208	ENST00000407417	GZF1	Q9H116	711 aa	Predicted RBP	10.51	□□□□□ -0.73
NFIA-208	ENST00000407417	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.51	□□□□□ -0.73	1e-7	■■□□□ 12.8
NFIA-208	ENST00000407417	BTAF1	O14981	1849 aa		10.5	□□□□□ -0.73
NFIA-208	ENST00000407417	PHKG2	P15735	406 aa		10.5	□□□□□ -0.73
NFIA-208	ENST00000407417	DUSP27	Q5VZP5	1158 aa		10.5	□□□□□ -0.73
NFIA-208	ENST00000407417	ZNF521	Q96K83	1311 aa		10.5	□□□□□ -0.73
NFIA-208	ENST00000407417	U2SURP	O15042	1029 aa	Known RBP	10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	DDIT3	P35638	169 aa		10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	KCNQ4	P56696	695 aa		10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	KDR	P35968	1356 aa		10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	UQCRHL	A0A096LP55	91 aa		10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	UQCRH	P07919	91 aa		10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	NKX1-1	Q15270	411 aa	Predicted RBP	10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	SASS6	Q6UVJ0	657 aa		10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	IFNL2	Q8IZJ0	200 aa		10.49	□□□□□ -0.73
NFIA-208	ENST00000407417	TOGARAM1	Q9Y4F4	1720 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	NASP	P49321	788 aa	Predicted RBP	10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	PPP4R3B	Q5MIZ7	849 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	MPRIP	Q6WCQ1	1025 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	CLEC17A	Q6ZS10	378 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	LRRC4B	Q9NT99	713 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	RGPD4	Q7Z3J3	1758 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	RBM25	P49756	843 aa	Known RBP	10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	NBPF14	Q5TI25	921 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	TRMT2A	Q8IZ69	625 aa	Known RBP	10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	CFAP53	Q96M91	514 aa		10.48	□□□□□ -0.73
NFIA-208	ENST00000407417	AMOT	Q4VCS5	1084 aa		10.47	□□□□□ -0.73
NFIA-208	ENST00000407417	PIGB	Q92521	554 aa		10.47	□□□□□ -0.73
NFIA-208	ENST00000407417	PDLIM2	Q96JY6	352 aa		10.47	□□□□□ -0.73
NFIA-208	ENST00000407417	SEC24B	O95487	1268 aa		10.46	□□□□□ -0.73
NFIA-208	ENST00000407417	GOLGA2	Q08379	1002 aa		10.46	□□□□□ -0.73
NFIA-208	ENST00000407417	SNX21	Q969T3	373 aa		10.46	□□□□□ -0.73
NFIA-208	ENST00000407417	SRCAP	Q6ZRS2	3230 aa		10.46	□□□□□ -0.73
NFIA-208	ENST00000407417	PLEKHG2	Q9H7P9	1386 aa		10.46	□□□□□ -0.74
NFIA-208	ENST00000407417	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.46	□□□□□ -0.74
NFIA-208	ENST00000407417	KDM6A	O15550	1401 aa	Predicted RBP	10.46	□□□□□ -0.74
NFIA-208	ENST00000407417	KAT6B	Q8WYB5	2073 aa		10.46	□□□□□ -0.74
NFIA-208	ENST00000407417	MTHFSD	Q2M296	383 aa	Known RBP	10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	C1orf141	Q5JVX7	400 aa		10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	GAS2L3	Q86XJ1	694 aa		10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	SMC5	Q8IY18	1101 aa		10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	ARX	Q96QS3	562 aa		10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	TMOD3	Q9NYL9	352 aa		10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	ZNF445	P59923	1031 aa		10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	ZNF827	Q17R98	1081 aa		10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.45	□□□□□ -0.74
NFIA-208	ENST00000407417	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.44	□□□□□ -0.74	9e-7	■■■■■ 27.6
NFIA-208	ENST00000407417	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.44	□□□□□ -0.74	7e-7	■■□□□ 12
NFIA-208	ENST00000407417	HSCB	Q8IWL3	235 aa		10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	DCAF5	Q96JK2	942 aa		10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	PRIMPOL	Q96LW4	560 aa		10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	STK32B	Q9NY57	414 aa		10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	CCNL1	Q9UK58	526 aa	Predicted RBP	10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	ASAP1	Q9ULH1	1129 aa		10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	ZKSCAN5	Q9Y2L8	839 aa		10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	PALLD	Q8WX93	1383 aa		10.44	□□□□□ -0.74
NFIA-208	ENST00000407417	GOLGA6L22	H0YM25	854 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	HSP90AB1	P08238	724 aa	Known RBP	10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	HMGN5	P82970	282 aa	Known RBP	10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	SLC20A2	Q08357	652 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	RAB3GAP1	Q15042	981 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	SLC15A2	Q16348	729 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	KLHL40	Q2TBA0	621 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	SLC27A3	Q5K4L6	730 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	CLUAP1	Q96AJ1	413 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	PAPPA	Q13219	1627 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	ITGB4	P16144	1822 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	PRKAR2B	P31323	418 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	SLFN5	Q08AF3	891 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	AKAP4	Q5JQC9	854 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	LGR6	Q9HBX8	967 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	TMEM51	Q9NW97	253 aa		10.43	□□□□□ -0.74
NFIA-208	ENST00000407417	ERVV-2	B6SEH9	535 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	CABP4	P57796	275 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	PHACTR3	Q96KR7	559 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	ATG3	Q9NT62	314 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	LY75	O60449	1722 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	IGHD	P01880	384 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	MYRIP	Q8NFW9	859 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	AKT1S1	Q96B36	256 aa		10.42	□□□□□ -0.74
NFIA-208	ENST00000407417	NFATC2IP	Q8NCF5	419 aa		10.41	□□□□□ -0.74
NFIA-208	ENST00000407417	SMARCC1	Q92922	1105 aa	Predicted RBP	10.41	□□□□□ -0.74
NFIA-208	ENST00000407417	C22orf23	Q9BZE7	217 aa		10.41	□□□□□ -0.74
NFIA-208	ENST00000407417	RNMT	O43148	476 aa	Known RBP	10.4	□□□□□ -0.74
NFIA-208	ENST00000407417	TNPO1	Q92973	898 aa	Known RBP	10.4	□□□□□ -0.74
NFIA-208	ENST00000407417	CCDC39	Q9UFE4	941 aa		10.4	□□□□□ -0.74
NFIA-208	ENST00000407417	LOC102724428	A0A0B4J2F2	783 aa		10.4	□□□□□ -0.74
NFIA-208	ENST00000407417	ZBTB7A	O95365	584 aa		10.4	□□□□□ -0.74
NFIA-208	ENST00000407417	SIK1	P57059	783 aa		10.4	□□□□□ -0.74
NFIA-208	ENST00000407417	FCHSD2	O94868	740 aa		10.39	□□□□□ -0.75
NFIA-208	ENST00000407417	TFCP2L1	Q9NZI6	479 aa		10.39	□□□□□ -0.75
NFIA-208	ENST00000407417	CASZ1	Q86V15	1759 aa		10.39	□□□□□ -0.75
NFIA-208	ENST00000407417		E9PSI1	815 aa		10.39	□□□□□ -0.75

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