RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PLEKHG5O94827 1062 aa13□□□□□ -0.33
CLIP4-204ENST00000404424 CNTROBQ8N137 903 aa13□□□□□ -0.33
CLIP4-204ENST00000404424 PI4K2BQ8TCG2 481 aa13□□□□□ -0.33
CLIP4-204ENST00000404424 IL1RAPL2Q9NP60 686 aa13□□□□□ -0.33
CLIP4-204ENST00000404424 MED1Q15648 1581 aaPredicted RBP13□□□□□ -0.33
CLIP4-204ENST00000404424 RAD50Q92878 1312 aa13□□□□□ -0.33
CLIP4-204ENST00000404424 WDR33Q9C0J8 1336 aaKnown RBP13□□□□□ -0.33
CLIP4-204ENST00000404424 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
CLIP4-204ENST00000404424 NUTM2GQ5VZR2 741 aa13□□□□□ -0.33
CLIP4-204ENST00000404424 IP6K1Q92551 441 aa13□□□□□ -0.33
CLIP4-204ENST00000404424 LTV1Q96GA3 475 aaPredicted RBP13□□□□□ -0.33
CLIP4-204ENST00000404424 SGSM2O43147 1006 aa12.99□□□□□ -0.33
CLIP4-204ENST00000404424 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
CLIP4-204ENST00000404424 TPM2P07951 284 aa12.99□□□□□ -0.33
CLIP4-204ENST00000404424 NUTM1Q86Y26 1132 aa12.99□□□□□ -0.33
CLIP4-204ENST00000404424 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
CLIP4-204ENST00000404424 NOL7Q9UMY1 257 aaKnown RBP12.99□□□□□ -0.33
CLIP4-204ENST00000404424 SYCE3A1L190 88 aa12.99□□□□□ -0.33
CLIP4-204ENST00000404424 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
CLIP4-204ENST00000404424 USP42Q9H9J4 1324 aaKnown RBP12.98□□□□□ -0.33
CLIP4-204ENST00000404424 KCNA6P17658 529 aa12.98□□□□□ -0.33
CLIP4-204ENST00000404424 FOXD4L5Q5VV16 416 aaPredicted RBP12.98□□□□□ -0.33
CLIP4-204ENST00000404424 FOXD4L4Q8WXT5 416 aaPredicted RBP12.98□□□□□ -0.33
CLIP4-204ENST00000404424 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
CLIP4-204ENST00000404424 NSFL1CQ9UNZ2 370 aaKnown RBP12.98□□□□□ -0.33
CLIP4-204ENST00000404424 TTC41PQ6P2S7 1318 aa12.98□□□□□ -0.33
CLIP4-204ENST00000404424 OFD1O75665 1012 aa12.98□□□□□ -0.33
CLIP4-204ENST00000404424 PHF14O94880 888 aa12.97□□□□□ -0.33
CLIP4-204ENST00000404424 EIF2S2P20042 333 aaKnown RBP12.97□□□□□ -0.33
CLIP4-204ENST00000404424 MCM5P33992 734 aa12.97□□□□□ -0.33
CLIP4-204ENST00000404424 TERF1P54274 439 aa12.97□□□□□ -0.33
CLIP4-204ENST00000404424 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.97□□□□□ -0.33
CLIP4-204ENST00000404424 IL25Q9H293 177 aa12.97□□□□□ -0.33
CLIP4-204ENST00000404424 ADGRL3Q9HAR2 1447 aa12.97□□□□□ -0.33
CLIP4-204ENST00000404424 ZNF500O60304 480 aaPredicted RBP12.97□□□□□ -0.33
CLIP4-204ENST00000404424 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
CLIP4-204ENST00000404424 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
CLIP4-204ENST00000404424 NOL8Q76FK4 1167 aaKnown RBP12.97□□□□□ -0.33
CLIP4-204ENST00000404424 LSG1Q9H089 658 aaKnown RBP12.97□□□□□ -0.33
CLIP4-204ENST00000404424 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
CLIP4-204ENST00000404424 HDAC5Q9UQL6 1122 aa12.97□□□□□ -0.33
CLIP4-204ENST00000404424 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 PI4KAP2A4QPH2 592 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 GLRX3O76003 335 aaKnown RBP12.96□□□□□ -0.33
CLIP4-204ENST00000404424 MTX1Q13505 466 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 AKAP4Q5JQC9 854 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.33
CLIP4-204ENST00000404424 KIAA1211Q6ZU35 1233 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 PI4KAP1Q8N8J0 262 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 TTC14Q96N46 770 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 CHPF2Q9P2E5 772 aa12.96□□□□□ -0.33
CLIP4-204ENST00000404424 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.34
CLIP4-204ENST00000404424 KCNH5Q8NCM2 988 aa12.96□□□□□ -0.34
CLIP4-204ENST00000404424 TSPY26PQ9H489 355 aa12.96□□□□□ -0.34
CLIP4-204ENST00000404424 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.96□□□□□ -0.34
CLIP4-204ENST00000404424 SNX14Q9Y5W7 946 aa12.96□□□□□ -0.34
CLIP4-204ENST00000404424 LTN1O94822 1766 aa12.96□□□□□ -0.34
CLIP4-204ENST00000404424 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 KLHL34Q8N239 644 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 CRYBG1Q9Y4K1 1723 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 TEFQ10587 303 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 LGR6Q9HBX8 967 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 CCDC39Q9UFE4 941 aa12.95□□□□□ -0.34
CLIP4-204ENST00000404424 NFAT5O94916 1531 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 BTBD11A6QL63 1104 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 MAP4K4O95819 1239 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-204ENST00000404424 AMOTQ4VCS5 1084 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-204ENST00000404424 CLASRPQ8N2M8 674 aaKnown RBP12.94□□□□□ -0.34
CLIP4-204ENST00000404424 DBF4Q9UBU7 674 aaPredicted RBP12.94□□□□□ -0.34
CLIP4-204ENST00000404424 LIMCH1Q9UPQ0 1083 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 ZKSCAN5Q9Y2L8 839 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 USP48Q86UV5 1035 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 ERC1Q8IUD2 1116 aa12.94□□□□□ -0.34
CLIP4-204ENST00000404424 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 ADCY9O60503 1353 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 GPATCH3Q96I76 525 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 ATP6V1DQ9Y5K8 247 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 OVOS2A0A0G2JMS6 1433 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
CLIP4-204ENST00000404424 PHRF1Q9P1Y6 1649 aaKnown RBP12.93□□□□□ -0.34
CLIP4-204ENST00000404424 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
CLIP4-204ENST00000404424 AK2P54819 239 aa12.93□□□□□ -0.34
CLIP4-204ENST00000404424 OS9Q13438 667 aaPredicted RBP12.93□□□□□ -0.34
CLIP4-204ENST00000404424 HSP90AA2PQ14568 343 aaPredicted RBP12.93□□□□□ -0.34
CLIP4-204ENST00000404424 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
CLIP4-204ENST00000404424 UVSSAQ2YD98 709 aa12.92□□□□□ -0.34
CLIP4-204ENST00000404424 ZNF530Q6P9A1 599 aaPredicted RBP12.92□□□□□ -0.34
CLIP4-204ENST00000404424 CWC27Q6UX04 472 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms