RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.93□□□□□ -1.3
CNGA1-202ENST00000402813 METTL5Q9NRN9 209 aaKnown RBP6.93□□□□□ -1.3
CNGA1-202ENST00000402813 FARP1Q9Y4F1 1045 aaPredicted RBP6.93□□□□□ -1.3
CNGA1-202ENST00000402813 FANCCQ00597 558 aa6.92□□□□□ -1.3
CNGA1-202ENST00000402813 WASHC5Q12768 1159 aa6.92□□□□□ -1.3
CNGA1-202ENST00000402813 CBLBQ13191 982 aa6.92□□□□□ -1.3
CNGA1-202ENST00000402813 FERMT3Q86UX7 667 aa6.92□□□□□ -1.3
CNGA1-202ENST00000402813 ITFG2Q969R8 447 aa6.92□□□□□ -1.3
CNGA1-202ENST00000402813 AQRO60306 1485 aaKnown RBP eCLIP6.92□□□□□ -1.3
CNGA1-202ENST00000402813 PABPN1LA6NDY0 278 aaKnown RBP6.92□□□□□ -1.3
CNGA1-202ENST00000402813 LGR6Q9HBX8 967 aa6.92□□□□□ -1.3
CNGA1-202ENST00000402813 CCDC61Q9Y6R9 512 aa6.92□□□□□ -1.3
CNGA1-202ENST00000402813 THOC2Q8NI27 1593 aaKnown RBP6.91□□□□□ -1.3
CNGA1-202ENST00000402813 TNNI2P48788 182 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 MDM2Q00987 491 aaPredicted RBP6.91□□□□□ -1.3
CNGA1-202ENST00000402813 DCTN1Q14203 1278 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 RNPC3Q96LT9 517 aaKnown RBP6.91□□□□□ -1.3
CNGA1-202ENST00000402813 BEGAINQ9BUH8 593 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 RBM28Q9NW13 759 aaKnown RBP6.91□□□□□ -1.3
CNGA1-202ENST00000402813 DYTNA2CJ06 578 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 NPHP1O15259 732 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 IPO8O15397 1037 aaKnown RBP6.91□□□□□ -1.3
CNGA1-202ENST00000402813 KRT18P05783 430 aaKnown RBP6.91□□□□□ -1.3
CNGA1-202ENST00000402813 NAT1P18440 290 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 SATB1Q01826 763 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 PDIA6Q15084 440 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 USP48Q86UV5 1035 aa6.91□□□□□ -1.3
CNGA1-202ENST00000402813 SPDYE16A6NNV3 312 aaPredicted RBP6.9□□□□□ -1.3
CNGA1-202ENST00000402813 COQ9O75208 318 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 RPN1P04843 607 aaKnown RBP6.9□□□□□ -1.3
CNGA1-202ENST00000402813 KCNA2P16389 499 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 BRD3Q15059 726 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 NDUFAF2Q8N183 169 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 CHCHD4Q8N4Q1 142 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 FAM212AQ96EL1 285 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 CDHR1Q96JP9 859 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 FAM210AQ96ND0 272 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 ZBTB12Q9Y330 459 aaPredicted RBP6.9□□□□□ -1.3
CNGA1-202ENST00000402813 SRGNP10124 158 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 CDC27P30260 824 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 SSTR3P32745 418 aaPredicted RBP6.9□□□□□ -1.3
CNGA1-202ENST00000402813 CLCN1P35523 988 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 ARID5AQ03989 594 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 ACBD5Q5T8D3 534 aaPredicted RBP6.9□□□□□ -1.3
CNGA1-202ENST00000402813 UBE2Q1Q7Z7E8 422 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 RELL1Q8IUW5 271 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 FAM13BQ9NYF5 915 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 PPP2R3BQ9Y5P8 575 aa6.9□□□□□ -1.3
CNGA1-202ENST00000402813 NUTM2FA1L443 756 aa6.9□□□□□ -1.31
CNGA1-202ENST00000402813 MYL1P05976 194 aa6.9□□□□□ -1.31
CNGA1-202ENST00000402813 EAPPQ56P03 285 aaPredicted RBP6.9□□□□□ -1.31
CNGA1-202ENST00000402813 C10orf62Q5T681 223 aaPredicted RBP6.9□□□□□ -1.31
CNGA1-202ENST00000402813 NCAPD3P42695 1498 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 RAPGEF3O95398 923 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 CASQ1P31415 396 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 NFE2Q16621 373 aaPredicted RBP6.89□□□□□ -1.31
CNGA1-202ENST00000402813 SUGP1Q8IWZ8 645 aaKnown RBP6.89□□□□□ -1.31
CNGA1-202ENST00000402813 SLF2Q8IX21 1173 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 IFNL3Q8IZI9 196 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 RNF34Q969K3 372 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 CFAP53Q96M91 514 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 SERINC2Q96SA4 455 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 CFAP43Q8NDM7 1665 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 TSPAN7P41732 249 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 IFT88Q13099 833 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 PPP2R5AQ15172 486 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 HSP90B2PQ58FF3 399 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 KANK4Q5T7N3 995 aaPredicted RBP6.89□□□□□ -1.31
CNGA1-202ENST00000402813 KLHL10Q6JEL2 608 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 WDR75Q8IWA0 830 aaKnown RBP6.89□□□□□ -1.31
CNGA1-202ENST00000402813 TMEM87AQ8NBN3 555 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 PHF8Q9UPP1 1060 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 MRPS23Q9Y3D9 190 aaKnown RBP6.89□□□□□ -1.31
CNGA1-202ENST00000402813 EFCAB5A4FU69 1503 aa6.89□□□□□ -1.31
CNGA1-202ENST00000402813 A0A1W2PRQ8 180 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 CHL1O00533 1208 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 TSPAN6O43657 245 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 SLC20A2Q08357 652 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 SERINC3Q13530 473 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 HLTFQ14527 1009 aaKnown RBP eCLIP6.88□□□□□ -1.31
CNGA1-202ENST00000402813 NYAP1Q6ZVC0 841 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 MYRIPQ8NFW9 859 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 GPCPD1Q9NPB8 672 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 INTUQ9ULD6 942 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 ZNF652Q9Y2D9 606 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 TRIM64CA6NLI5 447 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 K7ELQ4 463 aaPredicted RBP6.88□□□□□ -1.31
CNGA1-202ENST00000402813 TAF11Q15544 211 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 SKAP1Q86WV1 359 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 MCF2L2Q86YR7 1114 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 FBXO22Q8NEZ5 403 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 PAIP2Q9BPZ3 127 aaKnown RBP6.88□□□□□ -1.31
CNGA1-202ENST00000402813 C12orf49Q9H741 205 aa6.88□□□□□ -1.31
CNGA1-202ENST00000402813 FOSL1P15407 271 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 NDUFV2P19404 249 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 EXOSC10Q01780 885 aaKnown RBP6.87□□□□□ -1.31
CNGA1-202ENST00000402813 FAM160A1Q05DH4 1040 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 RC3H1Q5TC82 1133 aaKnown RBP6.87□□□□□ -1.31
CNGA1-202ENST00000402813 CCDC70Q6NSX1 233 aa6.87□□□□□ -1.31
CNGA1-202ENST00000402813 CCDC73Q6ZRK6 1079 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms