RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SLC16A10Q8TF71 515 aa23■■□□□ 1.27
CTNS-203ENST00000399306 CCDC87Q9NVE4 849 aa23■■□□□ 1.27
CTNS-203ENST00000399306 RTCBQ9Y3I0 505 aaKnown RBP22.99■■□□□ 1.27
CTNS-203ENST00000399306 SOS1Q07889 1333 aaPredicted RBP22.99■■□□□ 1.27
CTNS-203ENST00000399306 PNPLA7Q6ZV29 1317 aa22.99■■□□□ 1.27
CTNS-203ENST00000399306 INTS5Q6P9B9 1019 aaKnown RBP22.98■■□□□ 1.27
CTNS-203ENST00000399306 MBIPQ9NS73 344 aa22.98■■□□□ 1.27
CTNS-203ENST00000399306 LAS1LQ9Y4W2 734 aaKnown RBP22.98■■□□□ 1.27
CTNS-203ENST00000399306 GNPATO15228 680 aa22.97■■□□□ 1.27
CTNS-203ENST00000399306 PSDA5PKW4 1024 aaPredicted RBP22.96■■□□□ 1.27
CTNS-203ENST00000399306 CHMP4AQ9BY43 222 aa22.96■■□□□ 1.27
CTNS-203ENST00000399306 USP16Q9Y5T5 823 aa22.96■■□□□ 1.27
CTNS-203ENST00000399306 ERBB4Q15303 1308 aa22.96■■□□□ 1.27
CTNS-203ENST00000399306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.94■■□□□ 1.26
CTNS-203ENST00000399306 IL6STP40189 918 aaPredicted RBP22.94■■□□□ 1.26
CTNS-203ENST00000399306 TRAPPC3LQ5T215 181 aa22.94■■□□□ 1.26
CTNS-203ENST00000399306 COL23A1Q86Y22 540 aaPredicted RBP22.93■■□□□ 1.26
CTNS-203ENST00000399306 ZBTB1Q9Y2K1 713 aa22.93■■□□□ 1.26
CTNS-203ENST00000399306 SALL2Q9Y467 1007 aaPredicted RBP22.93■■□□□ 1.26
CTNS-203ENST00000399306 COL24A1Q17RW2 1714 aa22.93■■□□□ 1.26
CTNS-203ENST00000399306 EIF5P55010 431 aaKnown RBP22.92■■□□□ 1.26
CTNS-203ENST00000399306 MYH16Q9H6N6 1097 aa22.92■■□□□ 1.26
CTNS-203ENST00000399306 A0A087WZG4 1122 aa22.91■■□□□ 1.26
CTNS-203ENST00000399306 MTFR1LQ9H019 292 aa22.91■■□□□ 1.26
CTNS-203ENST00000399306 PRAMEF22A3QJZ6 481 aa22.9■■□□□ 1.26
CTNS-203ENST00000399306 GOLGA2Q08379 1002 aa22.9■■□□□ 1.26
CTNS-203ENST00000399306 AMIGO3Q86WK7 504 aa22.9■■□□□ 1.26
CTNS-203ENST00000399306 C4AP0C0L4 1744 aa22.89■■□□□ 1.26
CTNS-203ENST00000399306 E9PSI1 815 aa22.89■■□□□ 1.25
CTNS-203ENST00000399306 RGL2O15211 777 aa22.89■■□□□ 1.25
CTNS-203ENST00000399306 A1BGP04217 495 aa22.89■■□□□ 1.25
CTNS-203ENST00000399306 ARHGEF1Q92888 912 aaKnown RBP22.89■■□□□ 1.25
CTNS-203ENST00000399306 COL15A1P39059 1388 aa22.89■■□□□ 1.25
CTNS-203ENST00000399306 SENP3-EIF4A1A0A087X0R7 540 aa22.88■■□□□ 1.25
CTNS-203ENST00000399306 FANCIQ9NVI1 1328 aa22.87■■□□□ 1.25
CTNS-203ENST00000399306 LRP5O75197 1615 aa22.87■■□□□ 1.25
CTNS-203ENST00000399306 PHF14O94880 888 aa22.87■■□□□ 1.25
CTNS-203ENST00000399306 CANXP27824 592 aaKnown RBP22.87■■□□□ 1.25
CTNS-203ENST00000399306 RFC4P35249 363 aa22.87■■□□□ 1.25
CTNS-203ENST00000399306 DUSP27Q5VZP5 1158 aa22.87■■□□□ 1.25
CTNS-203ENST00000399306 NPM2Q86SE8 214 aaKnown RBP22.87■■□□□ 1.25
CTNS-203ENST00000399306 PDGFDQ9GZP0 370 aaPredicted RBP22.87■■□□□ 1.25
CTNS-203ENST00000399306 TSR2Q969E8 191 aaKnown RBP22.86■■□□□ 1.25
CTNS-203ENST00000399306 SPON1Q9HCB6 807 aa22.86■■□□□ 1.25
CTNS-203ENST00000399306 USP42Q9H9J4 1324 aaKnown RBP22.85■■□□□ 1.25
CTNS-203ENST00000399306 NBPF26B4DH59 902 aa22.85■■□□□ 1.25
CTNS-203ENST00000399306 NBPF10Q6P3W6 841 aaKnown RBP22.85■■□□□ 1.25
CTNS-203ENST00000399306 NBPF15Q8N660 670 aa22.85■■□□□ 1.25
CTNS-203ENST00000399306 NARFQ9UHQ1 456 aa22.85■■□□□ 1.25
CTNS-203ENST00000399306 MSH5O43196 834 aa22.84■■□□□ 1.25
CTNS-203ENST00000399306 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
CTNS-203ENST00000399306 KRT24Q2M2I5 525 aa22.84■■□□□ 1.25
CTNS-203ENST00000399306 HDGFL1Q5TGJ6 251 aa22.84■■□□□ 1.25
CTNS-203ENST00000399306 SPINK5Q9NQ38 1064 aaPredicted RBP22.84■■□□□ 1.25
CTNS-203ENST00000399306 CACNA1FO60840 1977 aa22.83■■□□□ 1.25
CTNS-203ENST00000399306 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
CTNS-203ENST00000399306 TRMT2AQ8IZ69 625 aaKnown RBP22.83■■□□□ 1.25
CTNS-203ENST00000399306 NLGN1Q8N2Q7 840 aa22.83■■□□□ 1.25
CTNS-203ENST00000399306 C8orf58Q8NAV2 365 aa22.83■■□□□ 1.25
CTNS-203ENST00000399306 DDX21Q9NR30 783 aaKnown RBP eCLIP22.83■■□□□ 1.25
CTNS-203ENST00000399306 ZPR1O75312 459 aa22.82■■□□□ 1.24
CTNS-203ENST00000399306 EIF2S2P20042 333 aaKnown RBP22.82■■□□□ 1.24
CTNS-203ENST00000399306 ZBTB7AO95365 584 aa22.81■■□□□ 1.24
CTNS-203ENST00000399306 GYS1P13807 737 aa22.81■■□□□ 1.24
CTNS-203ENST00000399306 PDIA6Q15084 440 aa22.81■■□□□ 1.24
CTNS-203ENST00000399306 TWISTNBQ3B726 338 aaPredicted RBP22.81■■□□□ 1.24
CTNS-203ENST00000399306 SGIP1Q9BQI5 828 aa22.81■■□□□ 1.24
CTNS-203ENST00000399306 DBF4Q9UBU7 674 aaPredicted RBP22.81■■□□□ 1.24
CTNS-203ENST00000399306 ZBED9Q6R2W3 1325 aa22.81■■□□□ 1.24
CTNS-203ENST00000399306 CCDC30Q5VVM6 783 aa22.8■■□□□ 1.24
CTNS-203ENST00000399306 SMIM5Q71RC9 77 aa22.8■■□□□ 1.24
CTNS-203ENST00000399306 LRP10Q7Z4F1 713 aa22.8■■□□□ 1.24
CTNS-203ENST00000399306 SCN7AQ01118 1682 aa22.8■■□□□ 1.24
CTNS-203ENST00000399306 BCORQ6W2J9 1755 aa22.79■■□□□ 1.24
CTNS-203ENST00000399306 PTGER2P43116 358 aa22.79■■□□□ 1.24
CTNS-203ENST00000399306 CLEC4GQ6UXB4 293 aa22.79■■□□□ 1.24
CTNS-203ENST00000399306 POLD1P28340 1107 aa22.78■■□□□ 1.24
CTNS-203ENST00000399306 DZIP3Q86Y13 1208 aaKnown RBP22.78■■□□□ 1.24
CTNS-203ENST00000399306 TSPYL6Q8N831 410 aa22.78■■□□□ 1.24
CTNS-203ENST00000399306 HYPKQ9NX55 129 aa22.78■■□□□ 1.24
CTNS-203ENST00000399306 ERVV-1B6SEH8 477 aa22.77■■□□□ 1.24
CTNS-203ENST00000399306 VAMP4O75379 141 aa22.77■■□□□ 1.24
CTNS-203ENST00000399306 EXOSC9Q06265 439 aaKnown RBP22.77■■□□□ 1.24
CTNS-203ENST00000399306 USPL1Q5W0Q7 1092 aa22.77■■□□□ 1.24
CTNS-203ENST00000399306 ZNF428Q96B54 188 aa22.77■■□□□ 1.24
CTNS-203ENST00000399306 ELL2O00472 640 aaPredicted RBP22.76■■□□□ 1.23
CTNS-203ENST00000399306 CAMTA2O94983 1202 aa22.76■■□□□ 1.23
CTNS-203ENST00000399306 CT47B1P0C2W7 299 aaPredicted RBP22.76■■□□□ 1.23
CTNS-203ENST00000399306 CHPF2Q9P2E5 772 aa22.76■■□□□ 1.23
CTNS-203ENST00000399306 SRP68Q9UHB9 627 aaKnown RBP22.76■■□□□ 1.23
CTNS-203ENST00000399306 ATF5Q9Y2D1 282 aaPredicted RBP22.76■■□□□ 1.23
CTNS-203ENST00000399306 MYL6BP14649 208 aa22.75■■□□□ 1.23
CTNS-203ENST00000399306 PIP4K2AP48426 406 aaPredicted RBP22.75■■□□□ 1.23
CTNS-203ENST00000399306 BCL2L12Q9HB09 334 aa22.75■■□□□ 1.23
CTNS-203ENST00000399306 ZNF652Q9Y2D9 606 aa22.75■■□□□ 1.23
CTNS-203ENST00000399306 ZNF330Q9Y3S2 320 aaPredicted RBP22.75■■□□□ 1.23
CTNS-203ENST00000399306 KIF6Q6ZMV9 814 aa22.74■■□□□ 1.23
CTNS-203ENST00000399306 CDCA7LQ96GN5 454 aa22.74■■□□□ 1.23
CTNS-203ENST00000399306 TBC1D2BQ9UPU7 963 aa22.74■■□□□ 1.23
CTNS-203ENST00000399306 MAP3K15Q6ZN16 1313 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms