RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 UBR3Q6ZT12 1888 aa22.55■■□□□ 1.2
CSNK1D-204ENST00000398519 QSER1Q2KHR3 1735 aa22.55■■□□□ 1.2
CSNK1D-204ENST00000398519 STARD3NLO95772 234 aa22.55■■□□□ 1.2
CSNK1D-204ENST00000398519 GOLGA2Q08379 1002 aa22.55■■□□□ 1.2
CSNK1D-204ENST00000398519 R3HDM1Q15032 1099 aaKnown RBP22.55■■□□□ 1.2
CSNK1D-204ENST00000398519 INTS5Q6P9B9 1019 aaKnown RBP22.55■■□□□ 1.2
CSNK1D-204ENST00000398519 AMIGO3Q86WK7 504 aa22.55■■□□□ 1.2
CSNK1D-204ENST00000398519 GNPATO15228 680 aa22.54■■□□□ 1.2
CSNK1D-204ENST00000398519 TFCP2L1Q9NZI6 479 aa22.54■■□□□ 1.2
CSNK1D-204ENST00000398519 CCDC87Q9NVE4 849 aa22.53■■□□□ 1.2
CSNK1D-204ENST00000398519 PSDA5PKW4 1024 aaPredicted RBP22.52■■□□□ 1.2
CSNK1D-204ENST00000398519 MYH16Q9H6N6 1097 aa22.52■■□□□ 1.2
CSNK1D-204ENST00000398519 ZBTB1Q9Y2K1 713 aa22.52■■□□□ 1.2
CSNK1D-204ENST00000398519 SMIM5Q71RC9 77 aa22.51■■□□□ 1.19
CSNK1D-204ENST00000398519 C8orf58Q8NAV2 365 aa22.51■■□□□ 1.19
CSNK1D-204ENST00000398519 CDCA7LQ96GN5 454 aa22.51■■□□□ 1.19
CSNK1D-204ENST00000398519 PNPLA7Q6ZV29 1317 aa22.51■■□□□ 1.19
CSNK1D-204ENST00000398519 E9PSI1 815 aa22.5■■□□□ 1.19
CSNK1D-204ENST00000398519 A1BGP04217 495 aa22.5■■□□□ 1.19
CSNK1D-204ENST00000398519 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
CSNK1D-204ENST00000398519 ZBED9Q6R2W3 1325 aa22.5■■□□□ 1.19
CSNK1D-204ENST00000398519 SLFN5Q08AF3 891 aa22.5■■□□□ 1.19
CSNK1D-204ENST00000398519 RPS6KA4O75676 772 aa22.49■■□□□ 1.19
CSNK1D-204ENST00000398519 PHF14O94880 888 aa22.49■■□□□ 1.19
CSNK1D-204ENST00000398519 HOXB7P09629 217 aa22.49■■□□□ 1.19
CSNK1D-204ENST00000398519 TSPYL6Q8N831 410 aa22.49■■□□□ 1.19
CSNK1D-204ENST00000398519 RTCBQ9Y3I0 505 aaKnown RBP22.49■■□□□ 1.19
CSNK1D-204ENST00000398519 CASZ1Q86V15 1759 aa22.49■■□□□ 1.19
CSNK1D-204ENST00000398519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-204ENST00000398519 ELL2O00472 640 aaPredicted RBP22.48■■□□□ 1.19
CSNK1D-204ENST00000398519 CANXP27824 592 aaKnown RBP22.48■■□□□ 1.19
CSNK1D-204ENST00000398519 SSFA2P28290 1259 aa22.48■■□□□ 1.19
CSNK1D-204ENST00000398519 PDGFDQ9GZP0 370 aaPredicted RBP22.48■■□□□ 1.19
CSNK1D-204ENST00000398519 SOS1Q07889 1333 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-204ENST00000398519 PIP4K2AP48426 406 aaPredicted RBP22.47■■□□□ 1.19
CSNK1D-204ENST00000398519 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 EIF2S2P20042 333 aaKnown RBP22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 EXOSC9Q06265 439 aaKnown RBP22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 COL23A1Q86Y22 540 aaPredicted RBP22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 TRMT2AQ8IZ69 625 aaKnown RBP22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 C4AP0C0L4 1744 aa22.46■■□□□ 1.19
CSNK1D-204ENST00000398519 NECTIN2Q92692 538 aa22.45■■□□□ 1.18
CSNK1D-204ENST00000398519 COL15A1P39059 1388 aa22.44■■□□□ 1.18
CSNK1D-204ENST00000398519 ADRA2BP18089 450 aa22.44■■□□□ 1.18
CSNK1D-204ENST00000398519 IL6STP40189 918 aaPredicted RBP22.44■■□□□ 1.18
CSNK1D-204ENST00000398519 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
CSNK1D-204ENST00000398519 TWISTNBQ3B726 338 aaPredicted RBP22.44■■□□□ 1.18
CSNK1D-204ENST00000398519 HDGFL1Q5TGJ6 251 aa22.44■■□□□ 1.18
CSNK1D-204ENST00000398519 FLAD1Q8NFF5 587 aa22.44■■□□□ 1.18
CSNK1D-204ENST00000398519 ERBB4Q15303 1308 aa22.43■■□□□ 1.18
CSNK1D-204ENST00000398519 TRAPPC3LQ5T215 181 aa22.43■■□□□ 1.18
CSNK1D-204ENST00000398519 ARHGEF1Q92888 912 aaKnown RBP22.43■■□□□ 1.18
CSNK1D-204ENST00000398519 PDIA6Q15084 440 aa22.42■■□□□ 1.18
CSNK1D-204ENST00000398519 ZNF330Q9Y3S2 320 aaPredicted RBP22.42■■□□□ 1.18
CSNK1D-204ENST00000398519 MSH5O43196 834 aa22.41■■□□□ 1.18
CSNK1D-204ENST00000398519 PROSER3Q2NL68 480 aa22.41■■□□□ 1.18
CSNK1D-204ENST00000398519 VAMP4O75379 141 aa22.4■■□□□ 1.18
CSNK1D-204ENST00000398519 MYL6BP14649 208 aa22.4■■□□□ 1.18
CSNK1D-204ENST00000398519 LRP10Q7Z4F1 713 aa22.4■■□□□ 1.18
CSNK1D-204ENST00000398519 CHPF2Q9P2E5 772 aa22.4■■□□□ 1.18
CSNK1D-204ENST00000398519 ANXA1P04083 346 aa22.39■■□□□ 1.18
CSNK1D-204ENST00000398519 RFC4P35249 363 aa22.38■■□□□ 1.17
CSNK1D-204ENST00000398519 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
CSNK1D-204ENST00000398519 DDX21Q9NR30 783 aaKnown RBP eCLIP22.38■■□□□ 1.176e-8■■□□□ 13.9
CSNK1D-204ENST00000398519 DBF4Q9UBU7 674 aaPredicted RBP22.38■■□□□ 1.17
CSNK1D-204ENST00000398519 SRP68Q9UHB9 627 aaKnown RBP22.38■■□□□ 1.17
CSNK1D-204ENST00000398519 USP42Q9H9J4 1324 aaKnown RBP22.37■■□□□ 1.17
CSNK1D-204ENST00000398519 SCN7AQ01118 1682 aa22.37■■□□□ 1.17
CSNK1D-204ENST00000398519 A0A087WZG4 1122 aa22.37■■□□□ 1.17
CSNK1D-204ENST00000398519 CCDC30Q5VVM6 783 aa22.37■■□□□ 1.17
CSNK1D-204ENST00000398519 ZBTB7AO95365 584 aa22.36■■□□□ 1.17
CSNK1D-204ENST00000398519 NPM2Q86SE8 214 aaKnown RBP22.36■■□□□ 1.17
CSNK1D-204ENST00000398519 SLC16A10Q8TF71 515 aa22.36■■□□□ 1.17
CSNK1D-204ENST00000398519 NARFQ9UHQ1 456 aa22.36■■□□□ 1.17
CSNK1D-204ENST00000398519 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
CSNK1D-204ENST00000398519 BCORQ6W2J9 1755 aa22.35■■□□□ 1.17
CSNK1D-204ENST00000398519 DZIP3Q86Y13 1208 aaKnown RBP22.35■■□□□ 1.17
CSNK1D-204ENST00000398519 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
CSNK1D-204ENST00000398519 TCERG1O14776 1098 aaKnown RBP22.34■■□□□ 1.17
CSNK1D-204ENST00000398519 USPL1Q5W0Q7 1092 aa22.34■■□□□ 1.17
CSNK1D-204ENST00000398519 MTFR1LQ9H019 292 aa22.34■■□□□ 1.17
CSNK1D-204ENST00000398519 COL24A1Q17RW2 1714 aa22.34■■□□□ 1.17
CSNK1D-204ENST00000398519 ZPR1O75312 459 aa22.33■■□□□ 1.17
CSNK1D-204ENST00000398519 GYS1P13807 737 aa22.33■■□□□ 1.17
CSNK1D-204ENST00000398519 ARXQ96QS3 562 aa22.33■■□□□ 1.17
CSNK1D-204ENST00000398519 MSL1Q68DK7 614 aa22.33■■□□□ 1.16
CSNK1D-204ENST00000398519 TTLL7Q6ZT98 887 aa22.33■■□□□ 1.16
CSNK1D-204ENST00000398519 HYPKQ9NX55 129 aa22.33■■□□□ 1.16
CSNK1D-204ENST00000398519 CAMTA2O94983 1202 aa22.32■■□□□ 1.16
CSNK1D-204ENST00000398519 STK31Q9BXU1 1019 aa22.32■■□□□ 1.16
CSNK1D-204ENST00000398519 BCL2L12Q9HB09 334 aa22.32■■□□□ 1.16
CSNK1D-204ENST00000398519 SRCAPQ6ZRS2 3230 aa22.32■■□□□ 1.16
CSNK1D-204ENST00000398519 COPS6Q7L5N1 327 aa22.31■■□□□ 1.16
CSNK1D-204ENST00000398519 XAGE3Q8WTP9 111 aa22.31■■□□□ 1.16
CSNK1D-204ENST00000398519 ATF5Q9Y2D1 282 aaPredicted RBP22.31■■□□□ 1.16
CSNK1D-204ENST00000398519 FKBP8Q14318 412 aa22.3■■□□□ 1.16
CSNK1D-204ENST00000398519 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
CSNK1D-204ENST00000398519 SLC4A2P04920 1241 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms