RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 SPC24Q8NBT2 197 aa16.58■□□□□ 0.24
COL6A2-203ENST00000397763 RBM33Q96EV2 1170 aaKnown RBP16.58■□□□□ 0.24
COL6A2-203ENST00000397763 SOS1Q07889 1333 aaPredicted RBP16.58■□□□□ 0.24
COL6A2-203ENST00000397763 ADCY5O95622 1261 aa16.58■□□□□ 0.24
COL6A2-203ENST00000397763 HS1BP3Q53T59 392 aa16.58■□□□□ 0.24
COL6A2-203ENST00000397763 FERMT3Q86UX7 667 aa16.58■□□□□ 0.24
COL6A2-203ENST00000397763 NECAB1Q8N987 351 aa16.58■□□□□ 0.24
COL6A2-203ENST00000397763 SNX14Q9Y5W7 946 aa16.58■□□□□ 0.24
COL6A2-203ENST00000397763 CEBPAP49715 358 aaPredicted RBP16.57■□□□□ 0.24
COL6A2-203ENST00000397763 SASS6Q6UVJ0 657 aa16.57■□□□□ 0.24
COL6A2-203ENST00000397763 RICTORQ6R327 1708 aa16.57■□□□□ 0.24
COL6A2-203ENST00000397763 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
COL6A2-203ENST00000397763 KCNQ3O43525 872 aa16.57■□□□□ 0.24
COL6A2-203ENST00000397763 CASTP20810 708 aaKnown RBP16.57■□□□□ 0.24
COL6A2-203ENST00000397763 SYT1P21579 422 aa16.57■□□□□ 0.24
COL6A2-203ENST00000397763 MCM2P49736 904 aa16.57■□□□□ 0.24
COL6A2-203ENST00000397763 RUFY3Q7L099 469 aa16.57■□□□□ 0.24
COL6A2-203ENST00000397763 DNM1Q05193 864 aaKnown RBP16.56■□□□□ 0.24
COL6A2-203ENST00000397763 KIAA2012Q0VF49 1180 aa16.56■□□□□ 0.24
COL6A2-203ENST00000397763 ADCK5Q3MIX3 580 aa16.56■□□□□ 0.24
COL6A2-203ENST00000397763 RHPN1Q8TCX5 695 aa16.56■□□□□ 0.24
COL6A2-203ENST00000397763 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
COL6A2-203ENST00000397763 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
COL6A2-203ENST00000397763 DYNC1I1O14576 645 aa16.56■□□□□ 0.24
COL6A2-203ENST00000397763 LTKP29376 864 aa16.56■□□□□ 0.24
COL6A2-203ENST00000397763 TAF7Q15545 349 aaPredicted RBP16.56■□□□□ 0.24
COL6A2-203ENST00000397763 GNAT3A8MTJ3 354 aa16.55■□□□□ 0.24
COL6A2-203ENST00000397763 HSPA4P34932 840 aa16.55■□□□□ 0.24
COL6A2-203ENST00000397763 CBX1P83916 185 aa16.55■□□□□ 0.24
COL6A2-203ENST00000397763 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
COL6A2-203ENST00000397763 REREQ9P2R6 1566 aa16.55■□□□□ 0.24
COL6A2-203ENST00000397763 RIMBP3CA6NJZ7 1639 aa16.55■□□□□ 0.24
COL6A2-203ENST00000397763 RIMBP3BA6NNM3 1639 aa16.55■□□□□ 0.24
COL6A2-203ENST00000397763 RIMBP3Q9UFD9 1639 aa16.55■□□□□ 0.24
COL6A2-203ENST00000397763 RPAP1Q9BWH6 1393 aaPredicted RBP16.55■□□□□ 0.24
COL6A2-203ENST00000397763 TERF1P54274 439 aa16.54■□□□□ 0.24
COL6A2-203ENST00000397763 PTH1RQ03431 593 aa16.54■□□□□ 0.24
COL6A2-203ENST00000397763 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
COL6A2-203ENST00000397763 INTS4Q96HW7 963 aaKnown RBP16.54■□□□□ 0.24
COL6A2-203ENST00000397763 SMC3Q9UQE7 1217 aa16.54■□□□□ 0.24
COL6A2-203ENST00000397763 CAMK4Q16566 473 aa16.54■□□□□ 0.24
COL6A2-203ENST00000397763 PI4KAP2A4QPH2 592 aa16.54■□□□□ 0.24
COL6A2-203ENST00000397763 STX6O43752 255 aa16.54■□□□□ 0.24
COL6A2-203ENST00000397763 PI4KAP1Q8N8J0 262 aa16.54■□□□□ 0.24
COL6A2-203ENST00000397763 TSPOAP1O95153 1857 aa16.53■□□□□ 0.24
COL6A2-203ENST00000397763 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
COL6A2-203ENST00000397763 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
COL6A2-203ENST00000397763 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
COL6A2-203ENST00000397763 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
COL6A2-203ENST00000397763 AP5Z1O43299 807 aa16.53■□□□□ 0.24
COL6A2-203ENST00000397763 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
COL6A2-203ENST00000397763 CEP170BQ9Y4F5 1589 aaPredicted RBP16.53■□□□□ 0.24
COL6A2-203ENST00000397763 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
COL6A2-203ENST00000397763 SGSM2O43147 1006 aa16.52■□□□□ 0.24
COL6A2-203ENST00000397763 ANAPC15P60006 121 aa16.52■□□□□ 0.24
COL6A2-203ENST00000397763 STAP2Q9UGK3 403 aa16.52■□□□□ 0.24
COL6A2-203ENST00000397763 GJB2P29033 226 aa16.52■□□□□ 0.24
COL6A2-203ENST00000397763 LSG1Q9H089 658 aaKnown RBP16.51■□□□□ 0.23
COL6A2-203ENST00000397763 USP6P35125 1406 aa16.51■□□□□ 0.23
COL6A2-203ENST00000397763 OVOS2A0A0J9YW53 1432 aa16.51■□□□□ 0.23
COL6A2-203ENST00000397763 NOLC1Q14978 699 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL6A2-203ENST00000397763 OVOS2Q6IE36 1432 aa16.51■□□□□ 0.23
COL6A2-203ENST00000397763 KCNJ4P48050 445 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 CCDC183Q5T5S1 534 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 LIMCH1Q9UPQ0 1083 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
COL6A2-203ENST00000397763 RAD50Q92878 1312 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 IGSF3O75054 1194 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 PHF14O94880 888 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 F13A1P00488 732 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
COL6A2-203ENST00000397763 SETD1BQ9UPS6 1966 aaKnown RBP16.49■□□□□ 0.23
COL6A2-203ENST00000397763 PLEKHG3A1L390 1219 aa16.49■□□□□ 0.23
COL6A2-203ENST00000397763 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
COL6A2-203ENST00000397763 STK3Q13188 491 aa16.49■□□□□ 0.23
COL6A2-203ENST00000397763 TTC14Q96N46 770 aa16.49■□□□□ 0.23
COL6A2-203ENST00000397763 TFIP11Q9UBB9 837 aaKnown RBP16.49■□□□□ 0.23
COL6A2-203ENST00000397763 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 PPFIA3O75145 1194 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 CKAP2LQ8IYA6 745 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 CNTROBQ8N137 903 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 SIL1Q9H173 461 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 TAF6LQ9Y6J9 622 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 C3P01024 1663 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 FLT4P35916 1363 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 CWF19L2Q2TBE0 894 aaKnown RBP16.48■□□□□ 0.23
COL6A2-203ENST00000397763 ABTB2Q8N961 1025 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
COL6A2-203ENST00000397763 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 MCM5P33992 734 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 FAM227BQ96M60 508 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 PYCARDQ9ULZ3 195 aa16.48■□□□□ 0.23
COL6A2-203ENST00000397763 FOSBP53539 338 aa16.47■□□□□ 0.23
COL6A2-203ENST00000397763 MPRIPQ6WCQ1 1025 aa16.47■□□□□ 0.23
COL6A2-203ENST00000397763 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
COL6A2-203ENST00000397763 CCDC8Q9H0W5 538 aaPredicted RBP16.47■□□□□ 0.23
COL6A2-203ENST00000397763 IGSF1Q8N6C5 1336 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms