RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NWD1Q149M9 1564 aa16.91■□□□□ 0.3
NUP98-204ENST00000397004 IGSF1Q8N6C5 1336 aa16.91■□□□□ 0.3
NUP98-204ENST00000397004 LARGE1O95461 756 aa16.91■□□□□ 0.3
NUP98-204ENST00000397004 HAP1P54257 671 aaPredicted RBP16.91■□□□□ 0.3
NUP98-204ENST00000397004 ANAPC15P60006 121 aa16.91■□□□□ 0.3
NUP98-204ENST00000397004 TTC14Q96N46 770 aa16.91■□□□□ 0.3
NUP98-204ENST00000397004 PLEKHG1Q9ULL1 1385 aa16.91■□□□□ 0.3
NUP98-204ENST00000397004 TPRNQ4KMQ1 711 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 PKNOX2Q96KN3 472 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 CNPY2Q9Y2B0 182 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 AP5Z1O43299 807 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 ZNF142P52746 1687 aaPredicted RBP16.9■□□□□ 0.3
NUP98-204ENST00000397004 MBD3O95983 291 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 TSC1Q92574 1164 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 RUFY3Q7L099 469 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 TSPY26PQ9H489 355 aa16.9■□□□□ 0.3
NUP98-204ENST00000397004 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.29
NUP98-204ENST00000397004 SNX14Q9Y5W7 946 aa16.89■□□□□ 0.29
NUP98-204ENST00000397004 SOS1Q07889 1333 aaPredicted RBP16.89■□□□□ 0.29
NUP98-204ENST00000397004 MCM2P49736 904 aa16.89■□□□□ 0.29
NUP98-204ENST00000397004 SSH3Q8TE77 659 aa16.89■□□□□ 0.29
NUP98-204ENST00000397004 RTF1Q92541 710 aaKnown RBP16.88■□□□□ 0.29
NUP98-204ENST00000397004 LSG1Q9H089 658 aaKnown RBP16.88■□□□□ 0.29
NUP98-204ENST00000397004 NBPF7P0C2Y1 421 aaPredicted RBP16.88■□□□□ 0.29
NUP98-204ENST00000397004 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
NUP98-204ENST00000397004 GLIPR1L2Q4G1C9 344 aa16.88■□□□□ 0.29
NUP98-204ENST00000397004 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
NUP98-204ENST00000397004 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
NUP98-204ENST00000397004 CCDC39Q9UFE4 941 aa16.87■□□□□ 0.29
NUP98-204ENST00000397004 USP25Q9UHP3 1055 aa16.87■□□□□ 0.29
NUP98-204ENST00000397004 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
NUP98-204ENST00000397004 AK2P54819 239 aa16.87■□□□□ 0.29
NUP98-204ENST00000397004 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
NUP98-204ENST00000397004 SGSM2O43147 1006 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 GNAI3P08754 354 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 POLA2Q14181 598 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 SLC26A8Q96RN1 970 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 SBNO1A3KN83 1393 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 FLT4P35916 1363 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
NUP98-204ENST00000397004 ARID3AQ99856 593 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 STK31Q9BXU1 1019 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 TTC12Q9H892 705 aaPredicted RBP16.86■□□□□ 0.29
NUP98-204ENST00000397004 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
NUP98-204ENST00000397004 DIP2AQ14689 1571 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 NUTM2GQ5VZR2 741 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 RAD50Q92878 1312 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 HCLS1P14317 486 aaPredicted RBP16.85■□□□□ 0.29
NUP98-204ENST00000397004 SYT1P21579 422 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 MCM5P33992 734 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 TMEM87AQ8NBN3 555 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
NUP98-204ENST00000397004 FUCA2Q9BTY2 467 aa16.85■□□□□ 0.29
NUP98-204ENST00000397004 RHPN1Q8TCX5 695 aa16.84■□□□□ 0.29
NUP98-204ENST00000397004 CRYBG1Q9Y4K1 1723 aa16.84■□□□□ 0.29
NUP98-204ENST00000397004 PTH1RQ03431 593 aa16.83■□□□□ 0.29
NUP98-204ENST00000397004 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.29
NUP98-204ENST00000397004 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.29
NUP98-204ENST00000397004 KCNQ3O43525 872 aa16.83■□□□□ 0.28
NUP98-204ENST00000397004 SURF6O75683 361 aaKnown RBP16.83■□□□□ 0.28
NUP98-204ENST00000397004 FAM177BA6PVY3 158 aa16.83■□□□□ 0.28
NUP98-204ENST00000397004 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
NUP98-204ENST00000397004 ANXA1P04083 346 aa16.83■□□□□ 0.28
NUP98-204ENST00000397004 MCCP23508 829 aa16.83■□□□□ 0.28
NUP98-204ENST00000397004 ZNF710Q8N1W2 664 aa16.83■□□□□ 0.28
NUP98-204ENST00000397004 WDR33Q9C0J8 1336 aaKnown RBP16.82■□□□□ 0.28
NUP98-204ENST00000397004 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
NUP98-204ENST00000397004 ZSCAN22P10073 491 aaPredicted RBP16.82■□□□□ 0.28
NUP98-204ENST00000397004 CWC27Q6UX04 472 aaKnown RBP16.82■□□□□ 0.28
NUP98-204ENST00000397004 AOX1Q06278 1338 aa16.81■□□□□ 0.28
NUP98-204ENST00000397004 ADCY5O95622 1261 aa16.81■□□□□ 0.28
NUP98-204ENST00000397004 AMPHP49418 695 aa16.81■□□□□ 0.28
NUP98-204ENST00000397004 HYPKQ9NX55 129 aa16.81■□□□□ 0.28
NUP98-204ENST00000397004 GIMAP6Q6P9H5 292 aa16.81■□□□□ 0.28
NUP98-204ENST00000397004 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
NUP98-204ENST00000397004 PRDM4Q9UKN5 801 aa16.81■□□□□ 0.28
NUP98-204ENST00000397004 HOXC9P31274 260 aa16.8■□□□□ 0.28
NUP98-204ENST00000397004 SRGAP3O43295 1099 aa16.8■□□□□ 0.28
NUP98-204ENST00000397004 STX6O43752 255 aa16.8■□□□□ 0.28
NUP98-204ENST00000397004 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
NUP98-204ENST00000397004 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
NUP98-204ENST00000397004 CACNA1FO60840 1977 aa16.79■□□□□ 0.28
NUP98-204ENST00000397004 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
NUP98-204ENST00000397004 DNM1Q05193 864 aaKnown RBP16.79■□□□□ 0.28
NUP98-204ENST00000397004 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
NUP98-204ENST00000397004 LTV1Q96GA3 475 aaPredicted RBP16.79■□□□□ 0.28
NUP98-204ENST00000397004 TAF6LQ9Y6J9 622 aa16.79■□□□□ 0.28
NUP98-204ENST00000397004 FIBPO43427 364 aa16.79■□□□□ 0.28
NUP98-204ENST00000397004 DYNC1I1O14576 645 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 F13A1P00488 732 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
NUP98-204ENST00000397004 HDGFL1Q5TGJ6 251 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 MTMR6Q9Y217 621 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 CSPP1Q1MSJ5 1256 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
NUP98-204ENST00000397004 HTATSF1O43719 755 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms