RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.34
CLIP2-203ENST00000395060 ACEP12821 1306 aa17.2■□□□□ 0.34
CLIP2-203ENST00000395060 STX6O43752 255 aa17.2■□□□□ 0.34
CLIP2-203ENST00000395060 EIF2S2P20042 333 aaKnown RBP17.2■□□□□ 0.34
CLIP2-203ENST00000395060 FLIIQ13045 1269 aa17.2■□□□□ 0.34
CLIP2-203ENST00000395060 DRC7Q8IY82 874 aa17.2■□□□□ 0.34
CLIP2-203ENST00000395060 CKAP2LQ8IYA6 745 aa17.2■□□□□ 0.34
CLIP2-203ENST00000395060 AGLP35573 1532 aa17.2■□□□□ 0.34
CLIP2-203ENST00000395060 TCHHQ07283 1943 aa17.2■□□□□ 0.34
CLIP2-203ENST00000395060 ZSCAN22P10073 491 aaPredicted RBP17.19■□□□□ 0.34
CLIP2-203ENST00000395060 CCT4P50991 539 aaKnown RBP17.19■□□□□ 0.34
CLIP2-203ENST00000395060 RBM33Q96EV2 1170 aaKnown RBP17.19■□□□□ 0.34
CLIP2-203ENST00000395060 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
CLIP2-203ENST00000395060 RIOK3O14730 519 aaKnown RBP17.19■□□□□ 0.34
CLIP2-203ENST00000395060 KDM4AO75164 1064 aa17.19■□□□□ 0.34
CLIP2-203ENST00000395060 ANXA1P04083 346 aa17.19■□□□□ 0.34
CLIP2-203ENST00000395060 RUFY3Q7L099 469 aa17.19■□□□□ 0.34
CLIP2-203ENST00000395060 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
CLIP2-203ENST00000395060 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
CLIP2-203ENST00000395060 TMEM2Q9UHN6 1383 aa17.18■□□□□ 0.34
CLIP2-203ENST00000395060 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-203ENST00000395060 INTS4Q96HW7 963 aaKnown RBP17.18■□□□□ 0.34
CLIP2-203ENST00000395060 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
CLIP2-203ENST00000395060 RPAP1Q9BWH6 1393 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-203ENST00000395060 NAA30Q147X3 362 aaPredicted RBP17.18■□□□□ 0.34
CLIP2-203ENST00000395060 MTERF4Q7Z6M4 381 aaKnown RBP17.18■□□□□ 0.34
CLIP2-203ENST00000395060 KCNF1Q9H3M0 494 aa17.18■□□□□ 0.34
CLIP2-203ENST00000395060 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-203ENST00000395060 PTGS1P23219 599 aa17.17■□□□□ 0.34
CLIP2-203ENST00000395060 GJB2P29033 226 aa17.17■□□□□ 0.34
CLIP2-203ENST00000395060 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
CLIP2-203ENST00000395060 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
CLIP2-203ENST00000395060 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-203ENST00000395060 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-203ENST00000395060 LRMPQ12912 555 aa17.17■□□□□ 0.34
CLIP2-203ENST00000395060 COL9A3Q14050 684 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-203ENST00000395060 LUZP1Q86V48 1076 aa17.17■□□□□ 0.34
CLIP2-203ENST00000395060 C16orf45Q96MC5 204 aaPredicted RBP17.17■□□□□ 0.34
CLIP2-203ENST00000395060 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
CLIP2-203ENST00000395060 CPS1P31327 1500 aa17.17■□□□□ 0.34
CLIP2-203ENST00000395060 ZSCAN20P17040 1043 aaPredicted RBP17.16■□□□□ 0.34
CLIP2-203ENST00000395060 PDCL2Q8N4E4 241 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 ZNF592Q92610 1267 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 TFIP11Q9UBB9 837 aaKnown RBP17.16■□□□□ 0.34
CLIP2-203ENST00000395060 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
CLIP2-203ENST00000395060 MAP3K19Q56UN5 1328 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 F13A1P00488 732 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 PRPF40BQ6NWY9 871 aaKnown RBP17.16■□□□□ 0.34
CLIP2-203ENST00000395060 PPP1R42Q7Z4L9 355 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 JAKMIP1Q96N16 626 aaKnown RBP17.16■□□□□ 0.34
CLIP2-203ENST00000395060 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
CLIP2-203ENST00000395060 TTC21BQ7Z4L5 1316 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 UBE2HP62256 183 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 NGDNQ8NEJ9 315 aaKnown RBP17.15■□□□□ 0.34
CLIP2-203ENST00000395060 ATP7BP35670 1465 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 KIF24Q5T7B8 1368 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 KCNJ4P48050 445 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 NRBP1Q9UHY1 535 aa17.15■□□□□ 0.34
CLIP2-203ENST00000395060 HSPA4P34932 840 aa17.14■□□□□ 0.34
CLIP2-203ENST00000395060 CHAF1AQ13111 956 aaPredicted RBP17.14■□□□□ 0.34
CLIP2-203ENST00000395060 STK3Q13188 491 aa17.14■□□□□ 0.34
CLIP2-203ENST00000395060 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.34
CLIP2-203ENST00000395060 DLG5Q8TDM6 1919 aa17.14■□□□□ 0.33
CLIP2-203ENST00000395060 FOSBP53539 338 aa17.14■□□□□ 0.33
CLIP2-203ENST00000395060 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
CLIP2-203ENST00000395060 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
CLIP2-203ENST00000395060 GNAI3P08754 354 aa17.14■□□□□ 0.33
CLIP2-203ENST00000395060 ANAPC15P60006 121 aa17.14■□□□□ 0.33
CLIP2-203ENST00000395060 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
CLIP2-203ENST00000395060 PRIMPOLQ96LW4 560 aa17.14■□□□□ 0.33
CLIP2-203ENST00000395060 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
CLIP2-203ENST00000395060 C14orf37Q86TY3 774 aa17.13■□□□□ 0.33
CLIP2-203ENST00000395060 LIMCH1Q9UPQ0 1083 aa17.13■□□□□ 0.33
CLIP2-203ENST00000395060 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
CLIP2-203ENST00000395060 PTH1RQ03431 593 aa17.12■□□□□ 0.33
CLIP2-203ENST00000395060 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
CLIP2-203ENST00000395060 LIG1P18858 919 aa17.12■□□□□ 0.33
CLIP2-203ENST00000395060 AMPHP49418 695 aa17.12■□□□□ 0.33
CLIP2-203ENST00000395060 CCDC186Q7Z3E2 898 aa17.12■□□□□ 0.33
CLIP2-203ENST00000395060 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.12■□□□□ 0.33
CLIP2-203ENST00000395060 V9GYY5 206 aaPredicted RBP17.12■□□□□ 0.33
CLIP2-203ENST00000395060 NBPF7P0C2Y1 421 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-203ENST00000395060 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
CLIP2-203ENST00000395060 DMTNQ08495 405 aa17.11■□□□□ 0.33
CLIP2-203ENST00000395060 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
CLIP2-203ENST00000395060 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
CLIP2-203ENST00000395060 A0A087WWV3 80 aa17.11■□□□□ 0.33
CLIP2-203ENST00000395060 UVSSAQ2YD98 709 aa17.11■□□□□ 0.33
CLIP2-203ENST00000395060 RHPN1Q8TCX5 695 aa17.11■□□□□ 0.33
CLIP2-203ENST00000395060 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-203ENST00000395060 SOS1Q07889 1333 aaPredicted RBP17.11■□□□□ 0.33
CLIP2-203ENST00000395060 KIF20BQ96Q89 1820 aa17.11■□□□□ 0.33
CLIP2-203ENST00000395060 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
CLIP2-203ENST00000395060 NPHP1O15259 732 aa17.1■□□□□ 0.33
CLIP2-203ENST00000395060 SGSM2O43147 1006 aa17.1■□□□□ 0.33
CLIP2-203ENST00000395060 KIAA1524Q8TCG1 905 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms