RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 USP16Q9Y5T5 823 aa26.03■■□□□ 1.76
SNCA-203ENST00000394986 SRCAPQ6ZRS2 3230 aa26.02■■□□□ 1.76
SNCA-203ENST00000394986 CHL1O00533 1208 aa26.02■■□□□ 1.76
SNCA-203ENST00000394986 WWC1Q8IX03 1113 aa26.02■■□□□ 1.76
SNCA-203ENST00000394986 FLAD1Q8NFF5 587 aa26.02■■□□□ 1.76
SNCA-203ENST00000394986 CCDC27Q2M243 656 aa26.01■■□□□ 1.75
SNCA-203ENST00000394986 TEX13AQ9BXU3 409 aaPredicted RBP26.01■■□□□ 1.75
SNCA-203ENST00000394986 BABAM1Q9NWV8 329 aa26.01■■□□□ 1.75
SNCA-203ENST00000394986 CANXP27824 592 aaKnown RBP26■■□□□ 1.75
SNCA-203ENST00000394986 CFAP44Q96MT7 982 aa26■■□□□ 1.75
SNCA-203ENST00000394986 MTFR1LQ9H019 292 aa26■■□□□ 1.75
SNCA-203ENST00000394986 GIGYF1O75420 1035 aaPredicted RBP25.99■■□□□ 1.75
SNCA-203ENST00000394986 A1BGP04217 495 aa25.99■■□□□ 1.75
SNCA-203ENST00000394986 ZNF853P0CG23 659 aa25.99■■□□□ 1.75
SNCA-203ENST00000394986 KRT24Q2M2I5 525 aa25.99■■□□□ 1.75
SNCA-203ENST00000394986 TRAPPC3LQ5T215 181 aa25.99■■□□□ 1.75
SNCA-203ENST00000394986 MSL1Q68DK7 614 aa25.99■■□□□ 1.75
SNCA-203ENST00000394986 ARHGEF1Q92888 912 aaKnown RBP25.99■■□□□ 1.75
SNCA-203ENST00000394986 SPON1Q9HCB6 807 aa25.99■■□□□ 1.75
SNCA-203ENST00000394986 MBIPQ9NS73 344 aa25.99■■□□□ 1.75
SNCA-203ENST00000394986 SOS1Q07889 1333 aaPredicted RBP25.98■■□□□ 1.75
SNCA-203ENST00000394986 PIP4K2AP48426 406 aaPredicted RBP25.98■■□□□ 1.75
SNCA-203ENST00000394986 CALD1Q05682 793 aaKnown RBP25.98■■□□□ 1.75
SNCA-203ENST00000394986 IFT57Q9NWB7 429 aa25.98■■□□□ 1.75
SNCA-203ENST00000394986 SLC16A10Q8TF71 515 aa25.97■■□□□ 1.75
SNCA-203ENST00000394986 LRP5O75197 1615 aa25.97■■□□□ 1.75
SNCA-203ENST00000394986 NCBP3Q53F19 620 aaKnown RBP25.97■■□□□ 1.75
SNCA-203ENST00000394986 ADRA2BP18089 450 aa25.96■■□□□ 1.75
SNCA-203ENST00000394986 PTGER2P43116 358 aa25.96■■□□□ 1.75
SNCA-203ENST00000394986 GNAI1P63096 354 aa25.96■■□□□ 1.75
SNCA-203ENST00000394986 ZNF330Q9Y3S2 320 aaPredicted RBP25.95■■□□□ 1.74
SNCA-203ENST00000394986 COL15A1P39059 1388 aa25.94■■□□□ 1.74
SNCA-203ENST00000394986 RFC4P35249 363 aa25.94■■□□□ 1.74
SNCA-203ENST00000394986 SGIP1Q9BQI5 828 aa25.94■■□□□ 1.74
SNCA-203ENST00000394986 SRP68Q9UHB9 627 aaKnown RBP25.94■■□□□ 1.74
SNCA-203ENST00000394986 TSR2Q969E8 191 aaKnown RBP25.93■■□□□ 1.74
SNCA-203ENST00000394986 C4AP0C0L4 1744 aa25.92■■□□□ 1.74
SNCA-203ENST00000394986 EIF5P55010 431 aaKnown RBP25.92■■□□□ 1.74
SNCA-203ENST00000394986 LAMB4A4D0S4 1761 aa25.92■■□□□ 1.74
SNCA-203ENST00000394986 NBPF26B4DH59 902 aa25.91■■□□□ 1.74
SNCA-203ENST00000394986 NBPF10Q6P3W6 841 aaKnown RBP25.91■■□□□ 1.74
SNCA-203ENST00000394986 NBPF15Q8N660 670 aa25.91■■□□□ 1.74
SNCA-203ENST00000394986 USP42Q9H9J4 1324 aaKnown RBP25.9■■□□□ 1.74
SNCA-203ENST00000394986 EIF2S2P20042 333 aaKnown RBP25.89■■□□□ 1.74
SNCA-203ENST00000394986 IL6STP40189 918 aaPredicted RBP25.89■■□□□ 1.74
SNCA-203ENST00000394986 IL16Q14005 1332 aa25.89■■□□□ 1.74
SNCA-203ENST00000394986 GYS1P13807 737 aa25.88■■□□□ 1.73
SNCA-203ENST00000394986 WDR63Q8IWG1 891 aa25.88■■□□□ 1.73
SNCA-203ENST00000394986 NECTIN2Q92692 538 aa25.88■■□□□ 1.73
SNCA-203ENST00000394986 SPINK5Q9NQ38 1064 aaPredicted RBP25.88■■□□□ 1.73
SNCA-203ENST00000394986 NGEFQ8N5V2 710 aa25.88■■□□□ 1.73
SNCA-203ENST00000394986 USPL1Q5W0Q7 1092 aa25.87■■□□□ 1.73
SNCA-203ENST00000394986 PPP1R1BQ9UD71 204 aaPredicted RBP25.87■■□□□ 1.73
SNCA-203ENST00000394986 ZNF521Q96K83 1311 aa25.86■■□□□ 1.73
SNCA-203ENST00000394986 ELL2O00472 640 aaPredicted RBP25.86■■□□□ 1.73
SNCA-203ENST00000394986 POLD1P28340 1107 aa25.86■■□□□ 1.73
SNCA-203ENST00000394986 DUSP27Q5VZP5 1158 aa25.86■■□□□ 1.73
SNCA-203ENST00000394986 ARXQ96QS3 562 aa25.86■■□□□ 1.73
SNCA-203ENST00000394986 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
SNCA-203ENST00000394986 ZPR1O75312 459 aa25.85■■□□□ 1.73
SNCA-203ENST00000394986 C8orf58Q8NAV2 365 aa25.85■■□□□ 1.73
SNCA-203ENST00000394986 NARFQ9UHQ1 456 aa25.85■■□□□ 1.73
SNCA-203ENST00000394986 FANCIQ9NVI1 1328 aa25.85■■□□□ 1.73
SNCA-203ENST00000394986 COL24A1Q17RW2 1714 aa25.84■■□□□ 1.73
SNCA-203ENST00000394986 MYL6BP14649 208 aa25.84■■□□□ 1.73
SNCA-203ENST00000394986 FKBP8Q14318 412 aa25.84■■□□□ 1.73
SNCA-203ENST00000394986 A0A087WZG4 1122 aa25.83■■□□□ 1.73
SNCA-203ENST00000394986 ANXA1P04083 346 aa25.83■■□□□ 1.73
SNCA-203ENST00000394986 PROSER3Q2NL68 480 aa25.83■■□□□ 1.73
SNCA-203ENST00000394986 NPM2Q86SE8 214 aaKnown RBP25.83■■□□□ 1.73
SNCA-203ENST00000394986 BCL2L12Q9HB09 334 aa25.83■■□□□ 1.73
SNCA-203ENST00000394986 TSPYL6Q8N831 410 aa25.82■■□□□ 1.72
SNCA-203ENST00000394986 MMP10P09238 476 aa25.81■■□□□ 1.72
SNCA-203ENST00000394986 PDIA6Q15084 440 aa25.81■■□□□ 1.72
SNCA-203ENST00000394986 HDGFL1Q5TGJ6 251 aa25.81■■□□□ 1.72
SNCA-203ENST00000394986 DZIP3Q86Y13 1208 aaKnown RBP25.81■■□□□ 1.72
SNCA-203ENST00000394986 NLGN1Q8N2Q7 840 aa25.81■■□□□ 1.72
SNCA-203ENST00000394986 HOXB7P09629 217 aa25.8■■□□□ 1.72
SNCA-203ENST00000394986 CAMTA2O94983 1202 aa25.8■■□□□ 1.72
SNCA-203ENST00000394986 CHPF2Q9P2E5 772 aa25.8■■□□□ 1.72
SNCA-203ENST00000394986 ERBB4Q15303 1308 aa25.79■■□□□ 1.72
SNCA-203ENST00000394986 SCN7AQ01118 1682 aa25.78■■□□□ 1.72
SNCA-203ENST00000394986 LRP10Q7Z4F1 713 aa25.78■■□□□ 1.72
SNCA-203ENST00000394986 KLHL34Q8N239 644 aa25.78■■□□□ 1.72
SNCA-203ENST00000394986 TTLL7Q6ZT98 887 aa25.77■■□□□ 1.72
SNCA-203ENST00000394986 FHDC1Q9C0D6 1143 aaPredicted RBP25.77■■□□□ 1.72
SNCA-203ENST00000394986 DDR1Q08345 913 aa25.76■■□□□ 1.71
SNCA-203ENST00000394986 EXOSC9Q06265 439 aaKnown RBP25.75■■□□□ 1.71
SNCA-203ENST00000394986 GOLGA2Q08379 1002 aa25.75■■□□□ 1.71
SNCA-203ENST00000394986 TWISTNBQ3B726 338 aaPredicted RBP25.75■■□□□ 1.71
SNCA-203ENST00000394986 BICDL1Q6ZP65 573 aa25.75■■□□□ 1.71
SNCA-203ENST00000394986 MYH16Q9H6N6 1097 aa25.75■■□□□ 1.71
SNCA-203ENST00000394986 NFIXQ14938 502 aa25.74■■□□□ 1.71
SNCA-203ENST00000394986 CDCA7LQ96GN5 454 aa25.74■■□□□ 1.71
SNCA-203ENST00000394986 DDX21Q9NR30 783 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNCA-203ENST00000394986 TM4SF1P30408 202 aa25.73■■□□□ 1.71
SNCA-203ENST00000394986 HNRNPUQ00839 825 aaKnown RBP eCLIP25.73■■□□□ 1.71
SNCA-203ENST00000394986 TBC1D9BQ66K14 1250 aa25.73■■□□□ 1.71
SNCA-203ENST00000394986 BCORQ6W2J9 1755 aa25.73■■□□□ 1.71
SNCA-203ENST00000394986 TCERG1O14776 1098 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms