RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
CCDC50-201ENST00000392455 RASAL2Q9UJF2 1139 aa17.01■□□□□ 0.31
CCDC50-201ENST00000392455 MRPS9P82933 396 aaKnown RBP17■□□□□ 0.31
CCDC50-201ENST00000392455 CFAP100Q494V2 611 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
CCDC50-201ENST00000392455 ODF2LQ9ULJ1 636 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 TMEM266Q2M3C6 531 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 CDK19Q9BWU1 502 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 FMNL3Q8IVF7 1028 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 KIF21BO75037 1637 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 ERICH4A6NGS2 130 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 ATP2A1O14983 1001 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 CFAP70Q5T0N1 1121 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 STIM2Q9P246 746 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 CLIP2Q9UDT6 1046 aa17■□□□□ 0.31
CCDC50-201ENST00000392455 NCAPGQ9BPX3 1015 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 LRRC27Q9C0I9 530 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 ALDH3A1P30838 453 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 MCM5P33992 734 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 ANO10Q9NW15 660 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 MNAT1P51948 309 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 YEATS4O95619 227 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 STMN1P16949 149 aa16.99■□□□□ 0.31
CCDC50-201ENST00000392455 SPINK5Q9NQ38 1064 aaPredicted RBP16.98■□□□□ 0.31
CCDC50-201ENST00000392455 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
CCDC50-201ENST00000392455 PPFIA2O75334 1257 aa16.98■□□□□ 0.31
CCDC50-201ENST00000392455 AMPD3Q01432 767 aa16.98■□□□□ 0.31
CCDC50-201ENST00000392455 LARP1BQ659C4 914 aaKnown RBP16.98■□□□□ 0.31
CCDC50-201ENST00000392455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.98■□□□□ 0.316e-9■□□□□ 8.8
CCDC50-201ENST00000392455 CCDC77Q9BR77 488 aa16.98■□□□□ 0.31
CCDC50-201ENST00000392455 SEPT10Q9P0V9 454 aa16.98■□□□□ 0.31
CCDC50-201ENST00000392455 ERCC6LQ2NKX8 1250 aa16.98■□□□□ 0.31
CCDC50-201ENST00000392455 TUBB4AP04350 444 aa16.98■□□□□ 0.31
CCDC50-201ENST00000392455 A0A1W2PRG0 241 aa16.98■□□□□ 0.31
CCDC50-201ENST00000392455 ARID4AP29374 1257 aaPredicted RBP16.97■□□□□ 0.31
CCDC50-201ENST00000392455 ZSCAN29Q8IWY8 852 aaPredicted RBP16.97■□□□□ 0.31
CCDC50-201ENST00000392455 TMOD2Q9NZR1 351 aa16.97■□□□□ 0.31
CCDC50-201ENST00000392455 HSF2BPO75031 334 aa16.97■□□□□ 0.31
CCDC50-201ENST00000392455 GRPEL1Q9HAV7 217 aa16.97■□□□□ 0.31
CCDC50-201ENST00000392455 AACSQ86V21 672 aa16.97■□□□□ 0.31
CCDC50-201ENST00000392455 CTNNBL1Q8WYA6 563 aaPredicted RBP16.97■□□□□ 0.31
CCDC50-201ENST00000392455 SPDYE4A6NLX3 237 aa16.96■□□□□ 0.31
CCDC50-201ENST00000392455 WDR63Q8IWG1 891 aa16.96■□□□□ 0.31
CCDC50-201ENST00000392455 TDO2P48775 406 aa16.96■□□□□ 0.31
CCDC50-201ENST00000392455 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
CCDC50-201ENST00000392455 ZNF530Q6P9A1 599 aaPredicted RBP16.96■□□□□ 0.31
CCDC50-201ENST00000392455 PRKCSHP14314 528 aaPredicted RBP16.96■□□□□ 0.31
CCDC50-201ENST00000392455 BTBD11A6QL63 1104 aa16.96■□□□□ 0.31
CCDC50-201ENST00000392455 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
CCDC50-201ENST00000392455 MSL1Q68DK7 614 aa16.96■□□□□ 0.31
CCDC50-201ENST00000392455 TUBBP07437 444 aa16.96■□□□□ 0.3
CCDC50-201ENST00000392455 KANK3Q6NY19 840 aa16.96■□□□□ 0.3
CCDC50-201ENST00000392455 PPFIBP2Q8ND30 876 aa16.96■□□□□ 0.3
CCDC50-201ENST00000392455 PNISRQ8TF01 805 aaKnown RBP16.96■□□□□ 0.3
CCDC50-201ENST00000392455 PAXBP1Q9Y5B6 917 aa16.96■□□□□ 0.3
CCDC50-201ENST00000392455 KIF4BQ2VIQ3 1234 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 SUPT6HQ7KZ85 1726 aaKnown RBP16.95■□□□□ 0.3
CCDC50-201ENST00000392455 FEZ2Q9UHY8 353 aaPredicted RBP16.95■□□□□ 0.3
CCDC50-201ENST00000392455 SNX16P57768 344 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 ZNF710Q8N1W2 664 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 CLGNO14967 610 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 SCAND2PQ9GZW5 306 aaPredicted RBP16.95■□□□□ 0.3
CCDC50-201ENST00000392455 C10orf67Q8IYJ2 551 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 CCDC160A6NGH7 325 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 MAP7Q14244 749 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 HLTFQ14527 1009 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCDC50-201ENST00000392455 RGS22Q8NE09 1264 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 GABPB2Q8TAK5 448 aaPredicted RBP16.95■□□□□ 0.3
CCDC50-201ENST00000392455 SELENOOQ9BVL4 669 aa16.95■□□□□ 0.3
CCDC50-201ENST00000392455 RAB3IPQ96QF0 476 aaPredicted RBP16.94■□□□□ 0.3
CCDC50-201ENST00000392455 A6NNZ2 444 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 BCAR3O75815 825 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 LMAN1P49257 510 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 TUBB8Q3ZCM7 444 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 CCDC174Q6PII3 467 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCDC50-201ENST00000392455 BLOC1S2Q6QNY1 142 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 SYNJ2O15056 1496 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 TOP1P11387 765 aaKnown RBP16.94■□□□□ 0.3
CCDC50-201ENST00000392455 SMC1BQ8NDV3 1235 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.33e-7■■■■■ 29
CCDC50-201ENST00000392455 CCDC82Q8N4S0 544 aa16.94■□□□□ 0.3
CCDC50-201ENST00000392455 CCDC12Q8WUD4 166 aaPredicted RBP16.94■□□□□ 0.3
CCDC50-201ENST00000392455 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
CCDC50-201ENST00000392455 TPD52P55327 224 aaPredicted RBP16.94■□□□□ 0.3
CCDC50-201ENST00000392455 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
CCDC50-201ENST00000392455 A0A087WZG4 1122 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 CUL5Q93034 780 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 KIF5BP33176 963 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 KIAA0753Q2KHM9 967 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 ESPNB1AK53 854 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 MIPOL1Q8TD10 442 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
CCDC50-201ENST00000392455 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
CCDC50-201ENST00000392455 RPUSD2Q8IZ73 545 aaKnown RBP16.93■□□□□ 0.3
CCDC50-201ENST00000392455 GPATCH11Q8N954 259 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms