RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 CHMLP26374 656 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 ZMYM3Q14202 1370 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 ADGRL1O94910 1474 aa15.48■□□□□ 0.07
TRAPPC9-201ENST00000389328 SFPQP23246 707 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 AK2P54819 239 aa15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 SMAP1Q8IYB5 467 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 INTS4Q96HW7 963 aaKnown RBP15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 RHPN1Q8TCX5 695 aa15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 ZNF500O60304 480 aaPredicted RBP15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 SYT1P21579 422 aa15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 CEP135Q66GS9 1140 aa15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 HSP90AB2PQ58FF8 381 aa15.47■□□□□ 0.07
TRAPPC9-201ENST00000389328 PTPRTO14522 1441 aa15.46■□□□□ 0.07
TRAPPC9-201ENST00000389328 WASLO00401 505 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-201ENST00000389328 ZNF530Q6P9A1 599 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-201ENST00000389328 MYRIPQ8NFW9 859 aa15.46■□□□□ 0.07
TRAPPC9-201ENST00000389328 POLR3GO15318 223 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-201ENST00000389328 BRPF1P55201 1214 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-201ENST00000389328 ANXA1P04083 346 aa15.46■□□□□ 0.06
TRAPPC9-201ENST00000389328 MYL6BP14649 208 aa15.46■□□□□ 0.06
TRAPPC9-201ENST00000389328 PIBF1Q8WXW3 757 aa15.46■□□□□ 0.06
TRAPPC9-201ENST00000389328 CCP110O43303 1012 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 LUZP1Q86V48 1076 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 NOC3LQ8WTT2 800 aaKnown RBP15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 SLC26A8Q96RN1 970 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 DNAJC25Q9H1X3 360 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 PLCH2O75038 1416 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 ANO10Q9NW15 660 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 URI1O94763 535 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 TMCO3Q6UWJ1 677 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 USHBP1Q8N6Y0 703 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 ECHDC1Q9NTX5 307 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 CWC15Q9P013 229 aaKnown RBP15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 PDIA4P13667 645 aaKnown RBP15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 KRT32Q14532 448 aa15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 SAFBQ15424 915 aaKnown RBP eCLIP15.45■□□□□ 0.06
TRAPPC9-201ENST00000389328 TYRO3Q06418 890 aa15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 TAF3Q5VWG9 929 aa15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 BIN1O00499 593 aa15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 G2E3Q7L622 706 aa15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 U2AF2P26368 475 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 ATP8B2P98198 1209 aa15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
TRAPPC9-201ENST00000389328 RIOK3O14730 519 aaKnown RBP15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 DNAAF4Q8WXU2 420 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 MSH6P52701 1360 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 BTBD11A6QL63 1104 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 IPO7O95373 1038 aaKnown RBP15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 PCMTD1Q96MG8 357 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 SKILP12757 684 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 CCT2P78371 535 aaKnown RBP15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 PAXBP1Q9Y5B6 917 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 PI4KAP2A4QPH2 592 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 PI4KAP1Q8N8J0 262 aa15.43■□□□□ 0.06
TRAPPC9-201ENST00000389328 ABCA5Q8WWZ7 1642 aa15.42■□□□□ 0.06
TRAPPC9-201ENST00000389328 DHX16O60231 1041 aaKnown RBP15.42■□□□□ 0.06
TRAPPC9-201ENST00000389328 BRD1O95696 1058 aa15.42■□□□□ 0.06
TRAPPC9-201ENST00000389328 PLEKHO1Q53GL0 409 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC9-201ENST00000389328 FOXO3O43524 673 aa15.42■□□□□ 0.06
TRAPPC9-201ENST00000389328 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.062e-7■■■■■ 33.7
TRAPPC9-201ENST00000389328 FSIP1Q8NA03 581 aa15.42■□□□□ 0.06
TRAPPC9-201ENST00000389328 ANKRD20A12PQ8NF67 263 aa15.42■□□□□ 0.06
TRAPPC9-201ENST00000389328 FANCAO15360 1455 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 KIF2AO00139 706 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 NOM1Q5C9Z4 860 aaKnown RBP15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 LEKR1Q6ZMV7 388 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 RAPGEF4Q8WZA2 1011 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 GTPBP4Q9BZE4 634 aaKnown RBP15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 TMX1Q9H3N1 280 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 NLRP2Q9NX02 1062 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 FAM69CQ0P6D2 419 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 TMC6Q7Z403 805 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 AK7Q96M32 723 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 ISM2Q6H9L7 571 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 KRT222Q8N1A0 295 aa15.41■□□□□ 0.06
TRAPPC9-201ENST00000389328 EIF4A2Q14240 407 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 PPIP5K1Q6PFW1 1433 aa15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 CCAR1Q8IX12 1150 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 RBM8AQ9Y5S9 174 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 SNW1Q13573 536 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 CCDC70Q6NSX1 233 aa15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 EVI5LQ96CN4 794 aa15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 LRRC2Q9BYS8 371 aa15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 ACBD3Q9H3P7 528 aa15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 PUS7Q96PZ0 661 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-201ENST00000389328 NEMFO60524 1076 aa15.39■□□□□ 0.05
TRAPPC9-201ENST00000389328 FKBP4Q02790 459 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRAPPC9-201ENST00000389328 STX1AQ16623 288 aa15.39■□□□□ 0.05
TRAPPC9-201ENST00000389328 JMYQ8N9B5 988 aa15.39■□□□□ 0.05
TRAPPC9-201ENST00000389328 BCL2L12Q9HB09 334 aa15.39■□□□□ 0.05
TRAPPC9-201ENST00000389328 NSFL1CQ9UNZ2 370 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-201ENST00000389328 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
TRAPPC9-201ENST00000389328 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
TRAPPC9-201ENST00000389328 PLA2R1Q13018 1463 aa15.38■□□□□ 0.05
TRAPPC9-201ENST00000389328 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
TRAPPC9-201ENST00000389328 CTAGE5O15320 804 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms