RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 PLEKHF1Q96S99 279 aa21.15■□□□□ 0.98
UBL3-201ENST00000380680 XAGE3Q8WTP9 111 aa21.15■□□□□ 0.98
UBL3-201ENST00000380680 MEX3CQ5U5Q3 659 aaKnown RBP21.15■□□□□ 0.98
UBL3-201ENST00000380680 ORAI2Q96SN7 254 aa21.15■□□□□ 0.98
UBL3-201ENST00000380680 C19orf44Q9H6X5 657 aa21.15■□□□□ 0.98
UBL3-201ENST00000380680 PIP4K2AP48426 406 aaPredicted RBP21.14■□□□□ 0.98
UBL3-201ENST00000380680 SBNO1A3KN83 1393 aa21.14■□□□□ 0.98
UBL3-201ENST00000380680 KIF1BO60333 1816 aa21.14■□□□□ 0.97
UBL3-201ENST00000380680 DHX16O60231 1041 aaKnown RBP21.14■□□□□ 0.97
UBL3-201ENST00000380680 ATP2B1P20020 1258 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 KSR2Q6VAB6 950 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 MPNDQ8N594 471 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 MARCH6O60337 910 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 NFATC2IPQ8NCF5 419 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 OTUD7AQ8TE49 926 aaPredicted RBP21.13■□□□□ 0.97
UBL3-201ENST00000380680 SIRT1Q96EB6 747 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 DDX11Q96FC9 970 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 TET3O43151 1660 aa21.13■□□□□ 0.97
UBL3-201ENST00000380680 CFAP74Q9C0B2 1584 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 METTL24Q5JXM2 366 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 STK11IPQ8N1F8 1099 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 NPHP3Q7Z494 1330 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 IDH1O75874 414 aaKnown RBP21.12■□□□□ 0.97
UBL3-201ENST00000380680 LETM1O95202 739 aaPredicted RBP21.12■□□□□ 0.97
UBL3-201ENST00000380680 CCDC173Q0VFZ6 552 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 SART3Q15020 963 aaKnown RBP21.12■□□□□ 0.97
UBL3-201ENST00000380680 EVI5LQ96CN4 794 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 PES1O00541 588 aaKnown RBP21.12■□□□□ 0.97
UBL3-201ENST00000380680 KINO60870 393 aaKnown RBP21.12■□□□□ 0.97
UBL3-201ENST00000380680 IFIT1P09914 478 aaKnown RBP21.12■□□□□ 0.97
UBL3-201ENST00000380680 TPD52L1Q16890 204 aaPredicted RBP21.12■□□□□ 0.97
UBL3-201ENST00000380680 LIMCH1Q9UPQ0 1083 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 TRPM1Q7Z4N2 1603 aa21.12■□□□□ 0.97
UBL3-201ENST00000380680 MSH6P52701 1360 aa21.11■□□□□ 0.97
UBL3-201ENST00000380680 GRM8O00222 908 aa21.11■□□□□ 0.97
UBL3-201ENST00000380680 CWF19L2Q2TBE0 894 aaKnown RBP21.11■□□□□ 0.97
UBL3-201ENST00000380680 ESYT1Q9BSJ8 1104 aa21.11■□□□□ 0.97
UBL3-201ENST00000380680 PA2G4Q9UQ80 394 aaKnown RBP21.11■□□□□ 0.97
UBL3-201ENST00000380680 SYCE3A1L190 88 aa21.11■□□□□ 0.97
UBL3-201ENST00000380680 CROCC2H7BZ55 1655 aa21.1■□□□□ 0.97
UBL3-201ENST00000380680 UNC13BO14795 1591 aa21.1■□□□□ 0.97
UBL3-201ENST00000380680 CLTCL1P53675 1640 aa21.1■□□□□ 0.97
UBL3-201ENST00000380680 EFCAB6Q5THR3 1501 aa21.1■□□□□ 0.97
UBL3-201ENST00000380680 ALDH1L1O75891 902 aa21.1■□□□□ 0.97
UBL3-201ENST00000380680 BAG4O95429 457 aaKnown RBP21.1■□□□□ 0.97
UBL3-201ENST00000380680 GPTP24298 496 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 LGR6Q9HBX8 967 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 CCDC39Q9UFE4 941 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 CTNNA3Q9UI47 895 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 STK38Q15208 465 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 LINS1Q8NG48 757 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 HECW2Q9P2P5 1572 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 RAD21O60216 631 aa21.09■□□□□ 0.97
UBL3-201ENST00000380680 ADAMTS2O95450 1211 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 ZNF592Q92610 1267 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 SNX21Q969T3 373 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 GDPD2Q9HCC8 539 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 IFIT5Q13325 482 aaKnown RBP21.08■□□□□ 0.97
UBL3-201ENST00000380680 TMX3Q96JJ7 454 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 TRIM5Q9C035 493 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 MTMR7Q9Y216 660 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 ARAP3Q8WWN8 1544 aa21.08■□□□□ 0.97
UBL3-201ENST00000380680 PIP4K2BP78356 416 aa21.08■□□□□ 0.96
UBL3-201ENST00000380680 SHROOM2Q13796 1616 aa21.08■□□□□ 0.96
UBL3-201ENST00000380680 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.07■□□□□ 0.96
UBL3-201ENST00000380680 ABCC3O15438 1527 aa21.07■□□□□ 0.96
UBL3-201ENST00000380680 ME1P48163 572 aa21.07■□□□□ 0.96
UBL3-201ENST00000380680 HSPA2P54652 639 aa21.07■□□□□ 0.96
UBL3-201ENST00000380680 HSP90AA2PQ14568 343 aaPredicted RBP21.07■□□□□ 0.96
UBL3-201ENST00000380680 ZSCAN25Q6NSZ9 544 aa21.07■□□□□ 0.96
UBL3-201ENST00000380680 SPATA32Q96LK8 384 aa21.07■□□□□ 0.96
UBL3-201ENST00000380680 ZNF396Q96N95 335 aaPredicted RBP21.07■□□□□ 0.96
UBL3-201ENST00000380680 AKAP2Q9Y2D5 859 aa21.07■□□□□ 0.96
UBL3-201ENST00000380680 CWC25Q9NXE8 425 aaPredicted RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 NBPF6Q5VWK0 638 aa21.06■□□□□ 0.96
UBL3-201ENST00000380680 ZCRB1Q8TBF4 217 aaKnown RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 NBPF4Q96M43 638 aa21.06■□□□□ 0.96
UBL3-201ENST00000380680 RNMTO43148 476 aaKnown RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 TNMDQ9H2S6 317 aa21.06■□□□□ 0.96
UBL3-201ENST00000380680 SH2B1Q9NRF2 756 aaPredicted RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 GNL3LQ9NVN8 582 aaKnown RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 TRMT112Q9UI30 125 aaKnown RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 HOOK1Q9UJC3 728 aaKnown RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 U3KPZ7 1027 aaPredicted RBP21.06■□□□□ 0.96
UBL3-201ENST00000380680 CCDC192P0DO97 292 aa21.05■□□□□ 0.96
UBL3-201ENST00000380680 SNRKQ9NRH2 765 aa21.05■□□□□ 0.96
UBL3-201ENST00000380680 NACAP1Q9BZK3 213 aa21.05■□□□□ 0.96
UBL3-201ENST00000380680 GOLIM4O00461 696 aa21.05■□□□□ 0.96
UBL3-201ENST00000380680 BICDL1Q6ZP65 573 aa21.05■□□□□ 0.96
UBL3-201ENST00000380680 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
UBL3-201ENST00000380680 R3HCC1Q9Y3T6 440 aaKnown RBP21.04■□□□□ 0.96
UBL3-201ENST00000380680 ESPNB1AK53 854 aa21.04■□□□□ 0.96
UBL3-201ENST00000380680 EXOC5O00471 708 aa21.04■□□□□ 0.96
UBL3-201ENST00000380680 IMMTQ16891 758 aaKnown RBP21.03■□□□□ 0.96
UBL3-201ENST00000380680 VPS53Q5VIR6 699 aa21.03■□□□□ 0.96
UBL3-201ENST00000380680 MAP3K4Q9Y6R4 1608 aa21.03■□□□□ 0.96
UBL3-201ENST00000380680 LMBR1LQ6UX01 489 aa21.03■□□□□ 0.96
UBL3-201ENST00000380680 XBP1P17861 261 aa21.02■□□□□ 0.96
UBL3-201ENST00000380680 ABCF2Q9UG63 623 aa21.02■□□□□ 0.96
UBL3-201ENST00000380680 PRR36Q9H6K5 1346 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 489.1 ms