RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CNPY2Q9Y2B0 182 aa15□□□□□ -0.01
PRPF40B-202ENST00000380281 KCNJ4P48050 445 aa15□□□□□ -0.01
PRPF40B-202ENST00000380281 ZNF771Q7L3S4 317 aaPredicted RBP15□□□□□ -0.01
PRPF40B-202ENST00000380281 IL17REQ8NFR9 667 aa15□□□□□ -0.01
PRPF40B-202ENST00000380281 TSPOAP1O95153 1857 aa15□□□□□ -0.01
PRPF40B-202ENST00000380281 CYP2E1P05181 493 aaPredicted RBP14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 USP48Q86UV5 1035 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 FERMT3Q86UX7 667 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 IPO4Q8TEX9 1081 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 USP44Q9H0E7 712 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 USP25Q9UHP3 1055 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 PA2G4Q9UQ80 394 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 RGS12O14924 1447 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 CPSF1Q10570 1443 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 ARHGAP31Q2M1Z3 1444 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 BCL2L12Q9HB09 334 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 LGR6Q9HBX8 967 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 A2ML1A8K2U0 1454 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 PPFIA3O75145 1194 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 GNAI3P08754 354 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 SIL1Q9H173 461 aa14.99□□□□□ -0.01
PRPF40B-202ENST00000380281 PI4KAP2A4QPH2 592 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 GNAT3A8MTJ3 354 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 CDK11BP21127 795 aaKnown RBP14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 PI4KAP1Q8N8J0 262 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 KIF3AQ9Y496 699 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 FAM173BQ6P4H8 233 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 LRSAM1Q6UWE0 723 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 MPRIPQ6WCQ1 1025 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 RASEFQ8IZ41 740 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 PDCL2Q8N4E4 241 aa14.98□□□□□ -0.01
PRPF40B-202ENST00000380281 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 ATP8B2P98198 1209 aa14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 TTC12Q9H892 705 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 CLEC17AQ6ZS10 378 aa14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 CCDC83Q8IWF9 413 aa14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 NECAB1Q8N987 351 aa14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 HCLS1P14317 486 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 PAXIP1Q6ZW49 1069 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 LRRC59Q96AG4 307 aaKnown RBP14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
PRPF40B-202ENST00000380281 ATP7BP35670 1465 aa14.96□□□□□ -0.01
PRPF40B-202ENST00000380281 CDK12Q9NYV4 1490 aaPredicted RBP14.96□□□□□ -0.01
PRPF40B-202ENST00000380281 FOSBP53539 338 aa14.96□□□□□ -0.01
PRPF40B-202ENST00000380281 CASTP20810 708 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-202ENST00000380281 NOLC1Q14978 699 aaKnown RBP eCLIP14.96□□□□□ -0.01
PRPF40B-202ENST00000380281 PIP4K2AP48426 406 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 TSPY26PQ9H489 355 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 NEO1Q92859 1461 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 SOS1Q07889 1333 aaPredicted RBP14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 AATKQ6ZMQ8 1374 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 SPC24Q8NBT2 197 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 STK3Q13188 491 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 PRPF40BQ6NWY9 871 aaKnown RBP14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 GIMAP6Q6P9H5 292 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 SRCIN1Q9C0H9 1055 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 DLG5Q8TDM6 1919 aa14.95□□□□□ -0.02
PRPF40B-202ENST00000380281 PRAMEF22A3QJZ6 481 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 AK2P54819 239 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 RHPN1Q8TCX5 695 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 PRIMPOLQ96LW4 560 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 PREX1Q8TCU6 1659 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 LARGE1O95461 756 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 BRD1O95696 1058 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 DIAPH3Q9NSV4 1193 aa14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 C9orf78Q9NZ63 289 aaPredicted RBP14.94□□□□□ -0.02
PRPF40B-202ENST00000380281 HMGN5P82970 282 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 COL9A3Q14050 684 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 CAMK4Q16566 473 aa14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 CWF19L2Q2TBE0 894 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 KLHDC4Q8TBB5 520 aa14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 CCDC8Q9H0W5 538 aaPredicted RBP14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 NDUFB9Q9Y6M9 179 aa14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 SMC3Q9UQE7 1217 aa14.93□□□□□ -0.02
PRPF40B-202ENST00000380281 KIF20BQ96Q89 1820 aa14.92□□□□□ -0.02
PRPF40B-202ENST00000380281 CHMP4AQ9BY43 222 aa14.92□□□□□ -0.02
PRPF40B-202ENST00000380281 TEFQ10587 303 aa14.92□□□□□ -0.02
PRPF40B-202ENST00000380281 ADCK5Q3MIX3 580 aa14.92□□□□□ -0.02
PRPF40B-202ENST00000380281 EID1Q9Y6B2 187 aa14.92□□□□□ -0.02
PRPF40B-202ENST00000380281 CRB1P82279 1406 aa14.92□□□□□ -0.02
PRPF40B-202ENST00000380281 PIBF1Q8WXW3 757 aa14.91□□□□□ -0.02
PRPF40B-202ENST00000380281 PTH1RQ03431 593 aa14.91□□□□□ -0.02
PRPF40B-202ENST00000380281 DNM1Q05193 864 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-202ENST00000380281 SNX14Q9Y5W7 946 aa14.91□□□□□ -0.02
PRPF40B-202ENST00000380281 MBD3O95983 291 aa14.91□□□□□ -0.02
PRPF40B-202ENST00000380281 GTF2F1P35269 517 aaKnown RBP eCLIP14.91□□□□□ -0.02
PRPF40B-202ENST00000380281 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
PRPF40B-202ENST00000380281 SYT1P21579 422 aa14.9□□□□□ -0.02
PRPF40B-202ENST00000380281 HOXC9P31274 260 aa14.9□□□□□ -0.02
PRPF40B-202ENST00000380281 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
PRPF40B-202ENST00000380281 EDC3Q96F86 508 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-202ENST00000380281 TFIP11Q9UBB9 837 aaKnown RBP14.9□□□□□ -0.02
PRPF40B-202ENST00000380281 IRX5P78411 483 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 RIOK3O14730 519 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-202ENST00000380281 BOLA2Q9H3K6 86 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms