RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FAM43AQ8N2R8 423 aa7.89□□□□□ -1.15
NEDD9-202ENST00000379446 UGGT1Q9NYU2 1555 aa7.89□□□□□ -1.15
NEDD9-202ENST00000379446 PPP1R12BO60237 982 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-202ENST00000379446 UFL1O94874 794 aa7.89□□□□□ -1.15
NEDD9-202ENST00000379446 MFAP1P55081 439 aaKnown RBP7.89□□□□□ -1.15
NEDD9-202ENST00000379446 RBM10P98175 930 aaKnown RBP7.89□□□□□ -1.15
NEDD9-202ENST00000379446 THUMPD2Q9BTF0 503 aaKnown RBP7.89□□□□□ -1.15
NEDD9-202ENST00000379446 HSP90AB4PQ58FF6 505 aa7.89□□□□□ -1.15
NEDD9-202ENST00000379446 PICK1Q9NRD5 415 aa7.89□□□□□ -1.15
NEDD9-202ENST00000379446 PICALMQ13492 652 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 TTLL6Q8N841 843 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 C2orf69Q8N8R5 385 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 NOC3LQ8WTT2 800 aaKnown RBP7.88□□□□□ -1.15
NEDD9-202ENST00000379446 KDM4AO75164 1064 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 HLA-DOAP06340 250 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 TWISTNBQ3B726 338 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-202ENST00000379446 CLASRPQ8N2M8 674 aaKnown RBP7.88□□□□□ -1.15
NEDD9-202ENST00000379446 MPNDQ8N594 471 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 PPIP5K1Q6PFW1 1433 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 DNAJC10Q8IXB1 793 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 ZNF710Q8N1W2 664 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 SHANK2Q9UPX8 1470 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 IQCA1LA6NCM1 817 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 LDHCP07864 332 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 CREBRFQ8IUR6 639 aa7.88□□□□□ -1.15
NEDD9-202ENST00000379446 COL17A1Q9UMD9 1497 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-202ENST00000379446 ADGBQ8N7X0 1667 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 LOC102724428A0A0B4J2F2 783 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 SIK1P57059 783 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 NACAP1Q9BZK3 213 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 MKNK2Q9HBH9 465 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 FAM13BQ9NYF5 915 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 CPLX1O14810 134 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 KCNQ2O43526 872 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 TAOK3Q9H2K8 898 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 RWDD1Q9H446 243 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-202ENST00000379446 IP6K1Q92551 441 aa7.87□□□□□ -1.15
NEDD9-202ENST00000379446 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEDD9-202ENST00000379446 IGHDP01880 384 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 SLC5A1P13866 664 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 TRMT1LQ7Z2T5 733 aaKnown RBP7.86□□□□□ -1.15
NEDD9-202ENST00000379446 C21orf2O43822 256 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 TDO2P48775 406 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 DLGAP5Q15398 846 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 CCDC96Q2M329 555 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 USPL1Q5W0Q7 1092 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 ZNF804AQ7Z570 1209 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 TSR2Q969E8 191 aaKnown RBP7.86□□□□□ -1.15
NEDD9-202ENST00000379446 FOXD4L1Q9NU39 408 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 CHD1O14646 1710 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 MAGI2Q86UL8 1455 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 TTC16Q8NEE8 873 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 TNNQ9UQP3 1299 aa7.86□□□□□ -1.15
NEDD9-202ENST00000379446 TNIP1Q15025 636 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 CWC25Q9NXE8 425 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-202ENST00000379446 GNAI3P08754 354 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 NFE2L2Q16236 605 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 UBE3BQ7Z3V4 1068 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 FSD1Q9BTV5 496 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 RRAGDQ9NQL2 400 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-202ENST00000379446 SERPINB2P05120 415 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 SART3Q15020 963 aaKnown RBP7.85□□□□□ -1.15
NEDD9-202ENST00000379446 ZKSCAN2Q63HK3 967 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 POTEAQ6S8J7 498 aa7.85□□□□□ -1.15
NEDD9-202ENST00000379446 HCLS1P14317 486 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-202ENST00000379446 KCNA4P22459 653 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 MPHOSPH6Q99547 160 aaKnown RBP7.84□□□□□ -1.15
NEDD9-202ENST00000379446 GGA1Q9UJY5 639 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 NSD3Q9BZ95 1437 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 MINDY4BA8MYZ0 360 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 BAG3O95817 575 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 ZNF76P36508 570 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 C8orf34Q49A92 452 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 CCDC93Q567U6 631 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 DNTTIP2Q5QJE6 756 aaKnown RBP7.84□□□□□ -1.15
NEDD9-202ENST00000379446 GPHNQ9NQX3 736 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-202ENST00000379446 DBF4Q9UBU7 674 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-202ENST00000379446 MKRN1Q9UHC7 482 aaKnown RBP7.84□□□□□ -1.15
NEDD9-202ENST00000379446 PDZRN3Q9UPQ7 1066 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 CFAP65Q6ZU64 1925 aaKnown RBP7.84□□□□□ -1.15
NEDD9-202ENST00000379446 TRPM2O94759 1503 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 ANKRD45Q5TZF3 282 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 ANKRD13DQ6ZTN6 518 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 COPS6Q7L5N1 327 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 CARD14Q9BXL6 1004 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 PLA2R1Q13018 1463 aa7.84□□□□□ -1.15
NEDD9-202ENST00000379446 RAD17O75943 681 aa7.84□□□□□ -1.16
NEDD9-202ENST00000379446 FMNL1O95466 1100 aaPredicted RBP7.84□□□□□ -1.16
NEDD9-202ENST00000379446 TMOD4Q9NZQ9 345 aa7.84□□□□□ -1.16
NEDD9-202ENST00000379446 A0A0G2JLW4 131 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 IRX3P78415 501 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-202ENST00000379446 VPS72Q15906 364 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 PIBF1Q8WXW3 757 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 HOOK2Q96ED9 719 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 HOXC9P31274 260 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 ARMC9Q7Z3E5 817 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 CARD10Q9BWT7 1032 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 ZNF287Q9HBT7 754 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 AKAP4Q5JQC9 854 aa7.83□□□□□ -1.16
NEDD9-202ENST00000379446 HELBQ8NG08 1087 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms