RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 PPP1R1BQ9UD71 204 aaPredicted RBP15.51■□□□□ 0.07
PCNA-201ENST00000379143 CNTNAP4Q9C0A0 1308 aa15.51■□□□□ 0.07
PCNA-201ENST00000379143 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
PCNA-201ENST00000379143 LINC00116Q8NCU8 138 aa15.5■□□□□ 0.07
PCNA-201ENST00000379143 QSER1Q2KHR3 1735 aa15.5■□□□□ 0.07
PCNA-201ENST00000379143 DNAJC10Q8IXB1 793 aa15.49■□□□□ 0.07
PCNA-201ENST00000379143 FLAD1Q8NFF5 587 aa15.49■□□□□ 0.07
PCNA-201ENST00000379143 TFCP2L1Q9NZI6 479 aa15.49■□□□□ 0.07
PCNA-201ENST00000379143 CYP19A1P11511 503 aaPredicted RBP15.48■□□□□ 0.07
PCNA-201ENST00000379143 ZNF827Q17R98 1081 aa15.48■□□□□ 0.07
PCNA-201ENST00000379143 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
PCNA-201ENST00000379143 ZNF521Q96K83 1311 aa15.48■□□□□ 0.07
PCNA-201ENST00000379143 GIGYF1O75420 1035 aaPredicted RBP15.47■□□□□ 0.07
PCNA-201ENST00000379143 CRKLP46109 303 aaKnown RBP15.47■□□□□ 0.07
PCNA-201ENST00000379143 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
PCNA-201ENST00000379143 DCAF8L1A6NGE4 600 aa15.46■□□□□ 0.07
PCNA-201ENST00000379143 GNPATO15228 680 aa15.46■□□□□ 0.07
PCNA-201ENST00000379143 SSFA2P28290 1259 aa15.46■□□□□ 0.07
PCNA-201ENST00000379143 MYH16Q9H6N6 1097 aa15.46■□□□□ 0.07
PCNA-201ENST00000379143 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.07
PCNA-201ENST00000379143 RTCBQ9Y3I0 505 aaKnown RBP15.46■□□□□ 0.07
PCNA-201ENST00000379143 UBR3Q6ZT12 1888 aa15.46■□□□□ 0.06
PCNA-201ENST00000379143 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
PCNA-201ENST00000379143 RPS6KA4O75676 772 aa15.45■□□□□ 0.06
PCNA-201ENST00000379143 HOXB7P09629 217 aa15.45■□□□□ 0.06
PCNA-201ENST00000379143 HNRNPUQ00839 825 aaKnown RBP eCLIP15.45■□□□□ 0.06
PCNA-201ENST00000379143 GOLGA2Q08379 1002 aa15.45■□□□□ 0.06
PCNA-201ENST00000379143 CHMP4AQ9BY43 222 aa15.45■□□□□ 0.06
PCNA-201ENST00000379143 TUBGCP6Q96RT7 1819 aa15.45■□□□□ 0.06
PCNA-201ENST00000379143 INTS5Q6P9B9 1019 aaKnown RBP15.44■□□□□ 0.06
PCNA-201ENST00000379143 USP16Q9Y5T5 823 aa15.44■□□□□ 0.06
PCNA-201ENST00000379143 CHD4Q14839 1912 aa15.44■□□□□ 0.06
PCNA-201ENST00000379143 PNPLA7Q6ZV29 1317 aa15.44■□□□□ 0.06
PCNA-201ENST00000379143 PRAMEF22A3QJZ6 481 aa15.43■□□□□ 0.06
PCNA-201ENST00000379143 E9PSI1 815 aa15.43■□□□□ 0.06
PCNA-201ENST00000379143 MYH14Q7Z406 1995 aaKnown RBP15.43■□□□□ 0.06
PCNA-201ENST00000379143 ERBB4Q15303 1308 aa15.43■□□□□ 0.06
PCNA-201ENST00000379143 FANCIQ9NVI1 1328 aa15.43■□□□□ 0.06
PCNA-201ENST00000379143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.43■□□□□ 0.06
PCNA-201ENST00000379143 TRAPPC3LQ5T215 181 aa15.43■□□□□ 0.06
PCNA-201ENST00000379143 NPM2Q86SE8 214 aaKnown RBP15.43■□□□□ 0.06
PCNA-201ENST00000379143 SLC16A10Q8TF71 515 aa15.43■□□□□ 0.06
PCNA-201ENST00000379143 TSR2Q969E8 191 aaKnown RBP15.43■□□□□ 0.06
PCNA-201ENST00000379143 ZBTB1Q9Y2K1 713 aa15.43■□□□□ 0.06
PCNA-201ENST00000379143 PHF14O94880 888 aa15.42■□□□□ 0.06
PCNA-201ENST00000379143 CANXP27824 592 aaKnown RBP15.42■□□□□ 0.06
PCNA-201ENST00000379143 IL6STP40189 918 aaPredicted RBP15.42■□□□□ 0.06
PCNA-201ENST00000379143 PDGFDQ9GZP0 370 aaPredicted RBP15.42■□□□□ 0.06
PCNA-201ENST00000379143 A1BGP04217 495 aa15.41■□□□□ 0.06
PCNA-201ENST00000379143 DUSP27Q5VZP5 1158 aa15.41■□□□□ 0.06
PCNA-201ENST00000379143 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
PCNA-201ENST00000379143 A0A087WZG4 1122 aa15.4■□□□□ 0.06
PCNA-201ENST00000379143 EIF2S2P20042 333 aaKnown RBP15.4■□□□□ 0.06
PCNA-201ENST00000379143 RFC4P35249 363 aa15.4■□□□□ 0.06
PCNA-201ENST00000379143 SLFN5Q08AF3 891 aa15.4■□□□□ 0.06
PCNA-201ENST00000379143 KRT24Q2M2I5 525 aa15.4■□□□□ 0.06
PCNA-201ENST00000379143 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
PCNA-201ENST00000379143 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
PCNA-201ENST00000379143 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
PCNA-201ENST00000379143 COL15A1P39059 1388 aa15.39■□□□□ 0.05
PCNA-201ENST00000379143 ZBED9Q6R2W3 1325 aa15.39■□□□□ 0.05
PCNA-201ENST00000379143 EIF5P55010 431 aaKnown RBP15.39■□□□□ 0.05
PCNA-201ENST00000379143 TWISTNBQ3B726 338 aaPredicted RBP15.39■□□□□ 0.05
PCNA-201ENST00000379143 AMIGO3Q86WK7 504 aa15.39■□□□□ 0.05
PCNA-201ENST00000379143 C8orf58Q8NAV2 365 aa15.39■□□□□ 0.05
PCNA-201ENST00000379143 PTGER2P43116 358 aa15.38■□□□□ 0.05
PCNA-201ENST00000379143 ZNF784Q8NCA9 323 aaPredicted RBP15.38■□□□□ 0.05
PCNA-201ENST00000379143 MTFR1LQ9H019 292 aa15.38■□□□□ 0.05
PCNA-201ENST00000379143 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
PCNA-201ENST00000379143 NBPF26B4DH59 902 aa15.37■□□□□ 0.05
PCNA-201ENST00000379143 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
PCNA-201ENST00000379143 ZPR1O75312 459 aa15.37■□□□□ 0.05
PCNA-201ENST00000379143 ZBTB7AO95365 584 aa15.37■□□□□ 0.05
PCNA-201ENST00000379143 EXOSC9Q06265 439 aaKnown RBP15.37■□□□□ 0.05
PCNA-201ENST00000379143 CCDC30Q5VVM6 783 aa15.37■□□□□ 0.05
PCNA-201ENST00000379143 NBPF10Q6P3W6 841 aaKnown RBP15.37■□□□□ 0.05
PCNA-201ENST00000379143 NBPF15Q8N660 670 aa15.37■□□□□ 0.05
PCNA-201ENST00000379143 DDX21Q9NR30 783 aaKnown RBP eCLIP15.37■□□□□ 0.05
PCNA-201ENST00000379143 DBF4Q9UBU7 674 aaPredicted RBP15.37■□□□□ 0.05
PCNA-201ENST00000379143 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
PCNA-201ENST00000379143 SMIM5Q71RC9 77 aa15.36■□□□□ 0.05
PCNA-201ENST00000379143 TRMT2AQ8IZ69 625 aaKnown RBP15.36■□□□□ 0.05
PCNA-201ENST00000379143 TSPYL6Q8N831 410 aa15.36■□□□□ 0.05
PCNA-201ENST00000379143 USP42Q9H9J4 1324 aaKnown RBP15.35■□□□□ 0.05
PCNA-201ENST00000379143 MYL6BP14649 208 aa15.35■□□□□ 0.05
PCNA-201ENST00000379143 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
PCNA-201ENST00000379143 CDCA7LQ96GN5 454 aa15.35■□□□□ 0.05
PCNA-201ENST00000379143 NARFQ9UHQ1 456 aa15.35■□□□□ 0.05
PCNA-201ENST00000379143 PIP4K2AP48426 406 aaPredicted RBP15.34■□□□□ 0.05
PCNA-201ENST00000379143 PDIA6Q15084 440 aa15.34■□□□□ 0.05
PCNA-201ENST00000379143 DZIP3Q86Y13 1208 aaKnown RBP15.34■□□□□ 0.05
PCNA-201ENST00000379143 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
PCNA-201ENST00000379143 STK31Q9BXU1 1019 aa15.34■□□□□ 0.05
PCNA-201ENST00000379143 HYPKQ9NX55 129 aa15.34■□□□□ 0.05
PCNA-201ENST00000379143 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
PCNA-201ENST00000379143 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
PCNA-201ENST00000379143 RGL2O15211 777 aa15.33■□□□□ 0.04
PCNA-201ENST00000379143 VAMP4O75379 141 aa15.33■□□□□ 0.04
PCNA-201ENST00000379143 GYS1P13807 737 aa15.33■□□□□ 0.04
PCNA-201ENST00000379143 ARXQ96QS3 562 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms