RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
PCDH17-201ENST00000377918 ATP2B1P20020 1258 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 MSL1Q68DK7 614 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 CTNNBL1Q8WYA6 563 aaPredicted RBP16.81■□□□□ 0.28
PCDH17-201ENST00000377918 NUP88Q99567 741 aaPredicted RBP16.81■□□□□ 0.28
PCDH17-201ENST00000377918 CCDC171Q6TFL3 1326 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
PCDH17-201ENST00000377918 ATP5DP30049 168 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 NCAPGQ9BPX3 1015 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 LMAN1P49257 510 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 WDR63Q8IWG1 891 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 PPFIBP2Q8ND30 876 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
PCDH17-201ENST00000377918 MRPS9P82933 396 aaKnown RBP16.81■□□□□ 0.28
PCDH17-201ENST00000377918 SOGA1O94964 1423 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 GOLGA4Q13439 2230 aaKnown RBP16.81■□□□□ 0.28
PCDH17-201ENST00000377918 CCDC82Q8N4S0 544 aa16.81■□□□□ 0.28
PCDH17-201ENST00000377918 MYOM3Q5VTT5 1437 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 NDC80O14777 642 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 SNX16P57768 344 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 RSRC1Q96IZ7 334 aaKnown RBP16.8■□□□□ 0.28
PCDH17-201ENST00000377918 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
PCDH17-201ENST00000377918 RAI14Q9P0K7 980 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 ZNF652Q9Y2D9 606 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 STMN1P16949 149 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 GPATCH11Q8N954 259 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 FAM184BQ9ULE4 1060 aa16.8■□□□□ 0.28
PCDH17-201ENST00000377918 MAP7Q14244 749 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 CCDC160A6NGH7 325 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 PLIN1O60240 522 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 CEBPZQ03701 1054 aaKnown RBP16.79■□□□□ 0.28
PCDH17-201ENST00000377918 IFT74Q96LB3 600 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 SMC1BQ8NDV3 1235 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 RAB3IPQ96QF0 476 aaPredicted RBP16.79■□□□□ 0.28
PCDH17-201ENST00000377918 CALML4Q96GE6 196 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 VCX3BQ9H321 246 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 NBPF1Q3BBV0 1214 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 CCDC174Q6PII3 467 aa16.79■□□□□ 0.28
PCDH17-201ENST00000377918 RMND1Q9NWS8 449 aa16.78■□□□□ 0.28
PCDH17-201ENST00000377918 SSBP05455 408 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCDH17-201ENST00000377918 MYH9P35579 1960 aaKnown RBP16.78■□□□□ 0.28
PCDH17-201ENST00000377918 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
PCDH17-201ENST00000377918 SF3B2Q13435 895 aaKnown RBP16.78■□□□□ 0.28
PCDH17-201ENST00000377918 RNF41Q9H4P4 317 aaPredicted RBP16.78■□□□□ 0.28
PCDH17-201ENST00000377918 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
PCDH17-201ENST00000377918 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.78■□□□□ 0.28
PCDH17-201ENST00000377918 STX1AQ16623 288 aa16.77■□□□□ 0.28
PCDH17-201ENST00000377918 LRSAM1Q6UWE0 723 aa16.77■□□□□ 0.28
PCDH17-201ENST00000377918 LMBR1Q8WVP7 490 aa16.77■□□□□ 0.28
PCDH17-201ENST00000377918 FEZ2Q9UHY8 353 aaPredicted RBP16.77■□□□□ 0.28
PCDH17-201ENST00000377918 BMP15O95972 392 aa16.77■□□□□ 0.28
PCDH17-201ENST00000377918 TOP2AP11388 1531 aaKnown RBP16.77■□□□□ 0.27
PCDH17-201ENST00000377918 B4GALNT4Q76KP1 1039 aa16.77■□□□□ 0.27
PCDH17-201ENST00000377918 IQCA1Q86XH1 822 aa16.77■□□□□ 0.27
PCDH17-201ENST00000377918 LUC7L2Q9Y383 392 aaKnown RBP16.77■□□□□ 0.27
PCDH17-201ENST00000377918 VCXQ9H320 206 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 TCP11L1Q9NUJ3 509 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 MXRA7P84157 204 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 ZBTB16Q05516 673 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 MSANTD4Q8NCY6 345 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 PDRG1Q9NUG6 133 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 AFAP1L2Q8N4X5 818 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 ATF7IPQ6VMQ6 1270 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 UTP14AQ9BVJ6 771 aaKnown RBP16.76■□□□□ 0.27
PCDH17-201ENST00000377918 ARFGAP2Q8N6H7 521 aa16.76■□□□□ 0.27
PCDH17-201ENST00000377918 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
PCDH17-201ENST00000377918 A0A1B0GUA9 196 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 KRT222Q8N1A0 295 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 URI1O94763 535 aaPredicted RBP16.75■□□□□ 0.27
PCDH17-201ENST00000377918 MIPOL1Q8TD10 442 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 RBM25P49756 843 aaKnown RBP16.75■□□□□ 0.27
PCDH17-201ENST00000377918 IRX4P78413 519 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 ZBTB17Q13105 803 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 TPD52P55327 224 aaPredicted RBP16.75■□□□□ 0.27
PCDH17-201ENST00000377918 CACNA2D3Q8IZS8 1091 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 RGS22Q8NE09 1264 aa16.75■□□□□ 0.27
PCDH17-201ENST00000377918 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
PCDH17-201ENST00000377918 TSGA10Q9BZW7 698 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 HDAC9Q9UKV0 1011 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 PAIP2Q9BPZ3 127 aaKnown RBP16.74■□□□□ 0.27
PCDH17-201ENST00000377918 ATP11AP98196 1134 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 UVSSAQ2YD98 709 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 SPDYE4A6NLX3 237 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 NUP133Q8WUM0 1156 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 BCAP29Q9UHQ4 241 aa16.74■□□□□ 0.27
PCDH17-201ENST00000377918 DZIP1Q86YF9 867 aaKnown RBP16.73■□□□□ 0.27
PCDH17-201ENST00000377918 MTMR7Q9Y216 660 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 CLUL1Q15846 466 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 CROCCP2Q86T23 111 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 SEPT10Q9P0V9 454 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
PCDH17-201ENST00000377918 CEP120Q8N960 986 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 STX6O43752 255 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 NECTIN2Q92692 538 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 GOLGA1Q92805 767 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 WIZO95785 1651 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 MAATS1Q7Z4T9 603 aa16.73■□□□□ 0.27
PCDH17-201ENST00000377918 TRIM7Q9C029 511 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms