RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 ABCA9Q8IUA7 1624 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 ABCC4O15439 1325 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 NUCB2P80303 420 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 PRDM10Q9NQV6 1147 aa12.12□□□□□ -0.47
ZNF550-203ENST00000376230 ADAMTS2O95450 1211 aa12.11□□□□□ -0.47
ZNF550-203ENST00000376230 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
ZNF550-203ENST00000376230 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
ZNF550-203ENST00000376230 DDX46Q7L014 1031 aaKnown RBP12.11□□□□□ -0.47
ZNF550-203ENST00000376230 MROH2AA6NES4 1674 aa12.11□□□□□ -0.47
ZNF550-203ENST00000376230 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
ZNF550-203ENST00000376230 ATP8B2P98198 1209 aa12.11□□□□□ -0.47
ZNF550-203ENST00000376230 GUCY1B3Q02153 619 aa12.11□□□□□ -0.47
ZNF550-203ENST00000376230 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
ZNF550-203ENST00000376230 ZFYVE9O95405 1425 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
ZNF550-203ENST00000376230 KIF1BPQ96EK5 621 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 TFIP11Q9UBB9 837 aaKnown RBP12.1□□□□□ -0.47
ZNF550-203ENST00000376230 INO80Q9ULG1 1556 aaPredicted RBP12.1□□□□□ -0.47
ZNF550-203ENST00000376230 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
ZNF550-203ENST00000376230 ZSCAN23Q3MJ62 389 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 KCNH5Q8NCM2 988 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 RTL1A6NKG5 1358 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 SOS1Q07889 1333 aaPredicted RBP12.1□□□□□ -0.47
ZNF550-203ENST00000376230 QRICH2Q9H0J4 1663 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 CHST3Q7LGC8 479 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 ESYT1Q9BSJ8 1104 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
ZNF550-203ENST00000376230 UQCRHLA0A096LP55 91 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 TULP1O00294 542 aaPredicted RBP12.09□□□□□ -0.47
ZNF550-203ENST00000376230 UQCRHP07919 91 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 CAMK4Q16566 473 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 H3BQV1 296 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 ZNF830Q96NB3 372 aaPredicted RBP12.09□□□□□ -0.47
ZNF550-203ENST00000376230 RBSNQ9H1K0 784 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 NLRP1Q9C000 1473 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 ALKQ9UM73 1620 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 PTPRMP28827 1452 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 PTMSP20962 102 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
ZNF550-203ENST00000376230 IP6K1Q92551 441 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 SNX21Q969T3 373 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 CPS1P31327 1500 aa12.09□□□□□ -0.47
ZNF550-203ENST00000376230 TTC21AQ8NDW8 1320 aa12.08□□□□□ -0.47
ZNF550-203ENST00000376230 PIP4K2BP78356 416 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
ZNF550-203ENST00000376230 MTMR7Q9Y216 660 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 GTF2E1P29083 439 aaPredicted RBP12.08□□□□□ -0.48
ZNF550-203ENST00000376230 HAND2P61296 217 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 CCDC129Q6ZRS4 1044 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 FAM184AQ8NB25 1140 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 RUFY2Q8WXA3 655 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
ZNF550-203ENST00000376230 MAP3K5Q99683 1374 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 CHMLP26374 656 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 KLHL40Q2TBA0 621 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 FAM227BQ96M60 508 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 FAM135BQ49AJ0 1406 aa12.08□□□□□ -0.48
ZNF550-203ENST00000376230 FRMPD1Q5SYB0 1578 aa12.07□□□□□ -0.48
ZNF550-203ENST00000376230 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
ZNF550-203ENST00000376230 A1BGP04217 495 aa12.07□□□□□ -0.48
ZNF550-203ENST00000376230 TPM2P07951 284 aa12.07□□□□□ -0.48
ZNF550-203ENST00000376230 SPC24Q8NBT2 197 aa12.07□□□□□ -0.48
ZNF550-203ENST00000376230 ZNF594Q96JF6 807 aaPredicted RBP12.07□□□□□ -0.48
ZNF550-203ENST00000376230 CAMSAP1Q5T5Y3 1602 aa12.07□□□□□ -0.48
ZNF550-203ENST00000376230 ATP2B1P20020 1258 aa12.07□□□□□ -0.48
ZNF550-203ENST00000376230 EIF4A1P60842 406 aaKnown RBP12.07□□□□□ -0.48
ZNF550-203ENST00000376230 BICDL1Q6ZP65 573 aa12.07□□□□□ -0.48
ZNF550-203ENST00000376230 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 CHGBP05060 677 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 TIMM10P62072 90 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 BICD2Q8TD16 824 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 TSC1Q92574 1164 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 PDRG1Q9NUG6 133 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 LRRC7Q96NW7 1537 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 CCT2P78371 535 aaKnown RBP12.06□□□□□ -0.48
ZNF550-203ENST00000376230 HSP90AB4PQ58FF6 505 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 LMBR1LQ6UX01 489 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 DIP2CQ9Y2E4 1556 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 IQGAP1P46940 1657 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 GNL2Q13823 731 aaKnown RBP12.06□□□□□ -0.48
ZNF550-203ENST00000376230 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 SUCLG2Q96I99 432 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 KIF2CQ99661 725 aa12.06□□□□□ -0.48
ZNF550-203ENST00000376230 GOLIM4O00461 696 aa12.05□□□□□ -0.48
ZNF550-203ENST00000376230 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
ZNF550-203ENST00000376230 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
ZNF550-203ENST00000376230 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
ZNF550-203ENST00000376230 PIK3R4Q99570 1358 aa12.05□□□□□ -0.48
ZNF550-203ENST00000376230 USP6P35125 1406 aa12.05□□□□□ -0.48
ZNF550-203ENST00000376230 ZRSR1Q15695 479 aaKnown RBP12.05□□□□□ -0.48
ZNF550-203ENST00000376230 CCDC82Q8N4S0 544 aa12.05□□□□□ -0.48
ZNF550-203ENST00000376230 GRM8O00222 908 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 HELBQ8NG08 1087 aaPredicted RBP12.04□□□□□ -0.48
ZNF550-203ENST00000376230 ECHDC1Q9NTX5 307 aa12.04□□□□□ -0.48
ZNF550-203ENST00000376230 CYP46A1Q9Y6A2 500 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms