RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 ATP7BP35670 1465 aa16.27■□□□□ 0.2
CLIC4-201ENST00000374379 C19orf44Q9H6X5 657 aa16.27■□□□□ 0.2
CLIC4-201ENST00000374379 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
CLIC4-201ENST00000374379 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.27■□□□□ 0.2
CLIC4-201ENST00000374379 IQGAP1P46940 1657 aa16.27■□□□□ 0.2
CLIC4-201ENST00000374379 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
CLIC4-201ENST00000374379 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
CLIC4-201ENST00000374379 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
CLIC4-201ENST00000374379 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
CLIC4-201ENST00000374379 PHF14O94880 888 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 ECHDC1Q9NTX5 307 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 PDRG1Q9NUG6 133 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 USP6P35125 1406 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 GPTP24298 496 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 ANKRD13DQ6ZTN6 518 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 PANK2Q9BZ23 570 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 CAMSAP1Q5T5Y3 1602 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 CSPP1Q1MSJ5 1256 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 AATKQ6ZMQ8 1374 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 CADPS2Q86UW7 1296 aa16.26■□□□□ 0.19
CLIC4-201ENST00000374379 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 CCDC57Q2TAC2 916 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 BLOC1S2Q6QNY1 142 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
CLIC4-201ENST00000374379 PTPRMP28827 1452 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 CPLX1O14810 134 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 BAG4O95429 457 aaKnown RBP16.25■□□□□ 0.19
CLIC4-201ENST00000374379 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 TMX3Q96JJ7 454 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
CLIC4-201ENST00000374379 GRM8O00222 908 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 PSMA5P28066 241 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 PLEKHG1Q9ULL1 1385 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 CPA1P15085 419 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 DDX11Q96FC9 970 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 SNRKQ9NRH2 765 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 SYCE3A1L190 88 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 MROH2AA6NES4 1674 aa16.24■□□□□ 0.19
CLIC4-201ENST00000374379 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
CLIC4-201ENST00000374379 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
CLIC4-201ENST00000374379 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
CLIC4-201ENST00000374379 SETBP1Q9Y6X0 1596 aa16.23■□□□□ 0.19
CLIC4-201ENST00000374379 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
CLIC4-201ENST00000374379 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
CLIC4-201ENST00000374379 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
CLIC4-201ENST00000374379 LARP1BQ659C4 914 aaKnown RBP16.23■□□□□ 0.19
CLIC4-201ENST00000374379 SNRPA1P09661 255 aaKnown RBP16.22■□□□□ 0.19
CLIC4-201ENST00000374379 PIP4K2BP78356 416 aa16.22■□□□□ 0.19
CLIC4-201ENST00000374379 RBM25P49756 843 aaKnown RBP16.22■□□□□ 0.19
CLIC4-201ENST00000374379 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
CLIC4-201ENST00000374379 EIF4A1P60842 406 aaKnown RBP16.22■□□□□ 0.19
CLIC4-201ENST00000374379 DDX46Q7L014 1031 aaKnown RBP16.21■□□□□ 0.19
CLIC4-201ENST00000374379 SOS1Q07889 1333 aaPredicted RBP16.21■□□□□ 0.19
CLIC4-201ENST00000374379 CD2BP2O95400 341 aaKnown RBP16.21■□□□□ 0.19
CLIC4-201ENST00000374379 TTC39AQ5SRH9 613 aa16.21■□□□□ 0.19
CLIC4-201ENST00000374379 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
CLIC4-201ENST00000374379 NLRP1Q9C000 1473 aa16.21■□□□□ 0.19
CLIC4-201ENST00000374379 HIP1O00291 1037 aa16.21■□□□□ 0.19
CLIC4-201ENST00000374379 CHMLP26374 656 aa16.21■□□□□ 0.19
CLIC4-201ENST00000374379 WDR33Q9C0J8 1336 aaKnown RBP16.21■□□□□ 0.18
CLIC4-201ENST00000374379 TRDNQ13061 729 aa16.21■□□□□ 0.18
CLIC4-201ENST00000374379 SNX21Q969T3 373 aa16.21■□□□□ 0.18
CLIC4-201ENST00000374379 KIF3AQ9Y496 699 aa16.21■□□□□ 0.18
CLIC4-201ENST00000374379 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 NECAB1Q8N987 351 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 NDUFB9Q9Y6M9 179 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 ARHGEF40Q8TER5 1519 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 BICC1Q9H694 974 aaKnown RBP16.2■□□□□ 0.18
CLIC4-201ENST00000374379 PIK3C2BO00750 1634 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 NPHP3Q7Z494 1330 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 ARHGEF10O15013 1369 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 PROSER3Q2NL68 480 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 LMBR1LQ6UX01 489 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 VPS37DQ86XT2 251 aa16.2■□□□□ 0.18
CLIC4-201ENST00000374379 IGSF1Q8N6C5 1336 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 PNPLA6Q8IY17 1366 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 TULP1O00294 542 aaPredicted RBP16.19■□□□□ 0.18
CLIC4-201ENST00000374379 LINS1Q8NG48 757 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 CCDC158Q5M9N0 1113 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 NFXL1Q6ZNB6 911 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 MBD3O95983 291 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
CLIC4-201ENST00000374379 GOLIM4O00461 696 aa16.18■□□□□ 0.18
CLIC4-201ENST00000374379 LRRFIP1Q32MZ4 808 aaKnown RBP16.18■□□□□ 0.18
CLIC4-201ENST00000374379 NRXN1Q9ULB1 1477 aa16.18■□□□□ 0.18
CLIC4-201ENST00000374379 LRRC7Q96NW7 1537 aa16.18■□□□□ 0.18
CLIC4-201ENST00000374379 ZNF496Q96IT1 587 aaPredicted RBP16.18■□□□□ 0.18
CLIC4-201ENST00000374379 KIAA0232Q92628 1395 aa16.18■□□□□ 0.18
CLIC4-201ENST00000374379 RRP12Q5JTH9 1297 aaKnown RBP16.18■□□□□ 0.18
CLIC4-201ENST00000374379 LRRC2Q9BYS8 371 aa16.18■□□□□ 0.18
CLIC4-201ENST00000374379 ZCRB1Q8TBF4 217 aaKnown RBP16.18■□□□□ 0.18
CLIC4-201ENST00000374379 VWDEQ8N2E2 1590 aa16.18■□□□□ 0.18
CLIC4-201ENST00000374379 XRCC6P12956 609 aaKnown RBP eCLIP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms