RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.58□□□□□ -0.247e-10■■■■■ 139.2
CLIC4-201ENST00000374379 PTBP1P26599 531 aaKnown RBP eCLIP12.17□□□□□ -0.463e-20■■■■■ 91.6
CLIC4-201ENST00000374379 SF3B1O75533 1304 aaKnown RBP eCLIP13.71□□□□□ -0.225e-6■■■■■ 83.6
CLIC4-201ENST00000374379 QKIQ96PU8 341 aaKnown RBP eCLIP13.81□□□□□ -0.22e-10■■■■■ 76.3
CLIC4-201ENST00000374379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.027e-6■■■■■ 74.5
CLIC4-201ENST00000374379 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.32□□□□□ -0.447e-14■■■■■ 55.8
CLIC4-201ENST00000374379 DDX3XO00571 662 aaKnown RBP eCLIP14.52□□□□□ -0.091e-21■■■■■ 50.4
CLIC4-201ENST00000374379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.56□□□□□ -0.562e-11■■■■■ 46.5
CLIC4-201ENST00000374379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.48□□□□□ -0.252e-8■■■■■ 44
CLIC4-201ENST00000374379 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.018e-11■■■■■ 42.4
CLIC4-201ENST00000374379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.346e-6■■■■■ 38.2
CLIC4-201ENST00000374379 EWSR1Q01844 656 aaKnown RBP eCLIP11.63□□□□□ -0.556e-10■■■■■ 36.9
CLIC4-201ENST00000374379 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.11□□□□□ -0.157e-9■■■■■ 34.7
CLIC4-201ENST00000374379 TARDBPQ13148 414 aaKnown RBP eCLIP13.04□□□□□ -0.326e-9■■■■■ 29.8
CLIC4-201ENST00000374379 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.323e-10■■■■■ 29.3
CLIC4-201ENST00000374379 GTF2F1P35269 517 aaKnown RBP eCLIP15.15■□□□□ 0.022e-13■■■■■ 29.2
CLIC4-201ENST00000374379 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.598e-7■■■■■ 28.7
CLIC4-201ENST00000374379 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.83□□□□□ -0.27e-6■■■■■ 27.5
CLIC4-201ENST00000374379 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.163e-6■■■■□ 23.5
CLIC4-201ENST00000374379 RBFOX2O43251 390 aaKnown RBP eCLIP11.12□□□□□ -0.631e-6■■■■□ 23.3
CLIC4-201ENST00000374379 G3BP1Q13283 466 aaKnown RBP eCLIP16.58■□□□□ 0.245e-6■■■■□ 22.5
CLIC4-201ENST00000374379 CSTF2P33240 577 aaKnown RBP eCLIP12.88□□□□□ -0.353e-6■■■■□ 21.3
CLIC4-201ENST00000374379 SF3B4Q15427 424 aaKnown RBP eCLIP12.39□□□□□ -0.437e-7■■■□□ 18.9
CLIC4-201ENST00000374379 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■■□□ 18.3
CLIC4-201ENST00000374379 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.71■□□□□ 0.112e-7■■■□□ 17.3
CLIC4-201ENST00000374379 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.93□□□□□ -0.348e-11■■□□□ 14.4
CLIC4-201ENST00000374379 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.15□□□□□ -0.143e-7■■□□□ 14
CLIC4-201ENST00000374379 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.6□□□□□ -0.235e-6■■□□□ 13.3
CLIC4-201ENST00000374379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18■□□□□ 0.472e-6■■□□□ 13.2
CLIC4-201ENST00000374379 UPF1Q92900 1129 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■□□□ 12.6
CLIC4-201ENST00000374379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.623e-6■■□□□ 11.6
CLIC4-201ENST00000374379 U2AF2P26368 475 aaKnown RBP eCLIP15.3■□□□□ 0.046e-7■□□□□ 11
CLIC4-201ENST00000374379 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.58□□□□□ -0.082e-9■□□□□ 9
CLIC4-201ENST00000374379 RBM15Q96T37 977 aaKnown RBP eCLIP14.35□□□□□ -0.114e-6■□□□□ 8.6
CLIC4-201ENST00000374379 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■□□□□ 8.4
Retrieved 35 of 35 RNA–protein pairs in 40 ms