RNA–Protein interactions for RNA: ENST00000374001.6

A1CF-205, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene A1CF, Length 9,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-205ENST00000374001 TBX22Q9Y458 520 aa6.19□□□□□ -1.42
A1CF-205ENST00000374001 BMP15O95972 392 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 MAP3K12Q12852 859 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 NUTM2GQ5VZR2 741 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 MNS1Q8NEH6 495 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 PCMTD1Q96MG8 357 aaPredicted RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 AOX1Q06278 1338 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 TRAF1Q13077 416 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 RUFY1Q96T51 708 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 LIMCH1Q9UPQ0 1083 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 SBNO1A3KN83 1393 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 FGFR1OPO95684 399 aaKnown RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 SNRPA1P09661 255 aaKnown RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 CAVIN4Q5BKX8 364 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 ZSCAN16Q9H4T2 348 aaPredicted RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 ACEP12821 1306 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 WAPLQ7Z5K2 1190 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 CERS3Q8IU89 383 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 ECHDC1Q9NTX5 307 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 CWC15Q9P013 229 aaKnown RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 FYB1O15117 783 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 OFD1O75665 1012 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 NOM1Q5C9Z4 860 aaKnown RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 FOXD4L5Q5VV16 416 aaPredicted RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 CREBRFQ8IUR6 639 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 FOXD4L4Q8WXT5 416 aaPredicted RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 DNAJC2Q99543 621 aaKnown RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 ME1P48163 572 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 CCDC12Q8WUD4 166 aaPredicted RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 SNX21Q969T3 373 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 SPATA32Q96LK8 384 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 NLRP1Q9C000 1473 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 CCDC183Q5T5S1 534 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 SPTY2D1Q68D10 685 aaPredicted RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 TMTC2Q8N394 836 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 TBC1D32Q96NH3 1257 aa6.18□□□□□ -1.42
A1CF-205ENST00000374001 RBM27Q9P2N5 1060 aaKnown RBP6.18□□□□□ -1.42
A1CF-205ENST00000374001 DCAF8L1A6NGE4 600 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 MAP3K11Q16584 847 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 KANK3Q6NY19 840 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 ZGPATQ8N5A5 531 aaKnown RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 AIDAQ96BJ3 306 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 ARHGEF10O15013 1369 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 ATL3Q6DD88 541 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 CDC5LQ99459 802 aaKnown RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 MAP3K5Q99683 1374 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 E9PCH4 1651 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 SLC5A1P13866 664 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 BCL11BQ9C0K0 894 aaPredicted RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 PTPRTO14522 1441 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 KIF20AO95235 890 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 DNAI2Q9GZS0 605 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 CWC25Q9NXE8 425 aaPredicted RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 R3HCC1Q9Y3T6 440 aaKnown RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 TUBB4AP04350 444 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 CASTP20810 708 aaKnown RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 TUBB4BP68371 445 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 NUP62CLQ9H1M0 184 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 A0A1W2PP64 1363 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 MCM3P25205 808 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 TNNT3P45378 269 aaPredicted RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 CDCA7Q9BWT1 371 aaPredicted RBP6.17□□□□□ -1.42
A1CF-205ENST00000374001 DCTN1Q14203 1278 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 GRPEL1Q9HAV7 217 aa6.17□□□□□ -1.42
A1CF-205ENST00000374001 CAMSAP1Q5T5Y3 1602 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 PRPF40AO75400 957 aaKnown RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 TDO2P48775 406 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 AKAP4Q5JQC9 854 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 IQCA1Q86XH1 822 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 NME9Q86XW9 330 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 KIAA0232Q92628 1395 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 KIF5BP33176 963 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 C19orf44Q9H6X5 657 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 STRN4Q9NRL3 753 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 DDX19AQ9NUU7 478 aaKnown RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 GOLGA6L9A6NEM1 432 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 ZPR1O75312 459 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 SLC4A3P48751 1232 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 SOGA3Q5TF21 947 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 ANKRD44Q8N8A2 993 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 RAD50Q92878 1312 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 PPP1R12BO60237 982 aaPredicted RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 PPFIBP1Q86W92 1011 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 SMARCC1Q92922 1105 aaPredicted RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 RBM42Q9BTD8 480 aaKnown RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 KIF20BQ96Q89 1820 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 FIBPO43427 364 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 ERLIN2O94905 339 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 TTC22Q5TAA0 569 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 KLHL34Q8N239 644 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 JAKMIP1Q96N16 626 aaKnown RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 C1orf115Q9H7X2 142 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 PER1O15534 1290 aaPredicted RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 MBIPQ9NS73 344 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 ARHGAP31Q2M1Z3 1444 aa6.16□□□□□ -1.42
A1CF-205ENST00000374001 INTS4Q96HW7 963 aaKnown RBP6.16□□□□□ -1.42
A1CF-205ENST00000374001 PPP1R42Q7Z4L9 355 aa6.15□□□□□ -1.42
A1CF-205ENST00000374001 CNNM2Q9H8M5 875 aa6.15□□□□□ -1.42
A1CF-205ENST00000374001 LRP2BPQ9P2M1 347 aa6.15□□□□□ -1.42
A1CF-205ENST00000374001 ANKRD18BA2A2Z9 1011 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms