RNA–Protein interactions for RNA: ENST00000373833.10

RCC1-203, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-203ENST00000373833 SLIT2O94813 1529 aa13.22□□□□□ -0.29
RCC1-203ENST00000373833 OVOS2A0A0G2JMS6 1433 aa13.22□□□□□ -0.29
RCC1-203ENST00000373833 TMEM57Q8N5G2 664 aa13.22□□□□□ -0.29
RCC1-203ENST00000373833 TRPC5Q9UL62 973 aaPredicted RBP13.22□□□□□ -0.29
RCC1-203ENST00000373833 RGS3P49796 1198 aa13.21□□□□□ -0.29
RCC1-203ENST00000373833 ATG3Q9NT62 314 aa13.21□□□□□ -0.29
RCC1-203ENST00000373833 AAMPQ13685 434 aa13.21□□□□□ -0.29
RCC1-203ENST00000373833 GIGYF1O75420 1035 aaPredicted RBP13.21□□□□□ -0.3
RCC1-203ENST00000373833 ATP5J2-PTCD1G3V325 749 aa13.2□□□□□ -0.3
RCC1-203ENST00000373833 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
RCC1-203ENST00000373833 ZBTB3Q9H5J0 574 aa13.2□□□□□ -0.3
RCC1-203ENST00000373833 USP54Q70EL1 1684 aa13.2□□□□□ -0.3
RCC1-203ENST00000373833 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
RCC1-203ENST00000373833 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
RCC1-203ENST00000373833 PHF14O94880 888 aa13.19□□□□□ -0.3
RCC1-203ENST00000373833 RBM10P98175 930 aaKnown RBP13.19□□□□□ -0.3
RCC1-203ENST00000373833 AMIGO3Q86WK7 504 aa13.19□□□□□ -0.3
RCC1-203ENST00000373833 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
RCC1-203ENST00000373833 CALD1Q05682 793 aaKnown RBP13.18□□□□□ -0.3
RCC1-203ENST00000373833 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
RCC1-203ENST00000373833 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
RCC1-203ENST00000373833 COL14A1Q05707 1796 aaKnown RBP13.18□□□□□ -0.3
RCC1-203ENST00000373833 PI4KAP2A4QPH2 592 aa13.18□□□□□ -0.3
RCC1-203ENST00000373833 ATP6V1AP38606 617 aa13.18□□□□□ -0.3
RCC1-203ENST00000373833 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
RCC1-203ENST00000373833 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
RCC1-203ENST00000373833 PI4KAP1Q8N8J0 262 aa13.18□□□□□ -0.3
RCC1-203ENST00000373833 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
RCC1-203ENST00000373833 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
RCC1-203ENST00000373833 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
RCC1-203ENST00000373833 NBPF14Q5TI25 921 aa13.17□□□□□ -0.3
RCC1-203ENST00000373833 ZKSCAN2Q63HK3 967 aa13.17□□□□□ -0.3
RCC1-203ENST00000373833 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
RCC1-203ENST00000373833 NBPF15Q8N660 670 aa13.17□□□□□ -0.3
RCC1-203ENST00000373833 CHMP4AQ9BY43 222 aa13.17□□□□□ -0.3
RCC1-203ENST00000373833 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
RCC1-203ENST00000373833 GPTP24298 496 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 RXRBP28702 533 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 FLIIQ13045 1269 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 ITPK1Q13572 414 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 BICDL1Q6ZP65 573 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 KRT27Q7Z3Y8 459 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
RCC1-203ENST00000373833 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
RCC1-203ENST00000373833 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
RCC1-203ENST00000373833 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
RCC1-203ENST00000373833 WWC3Q9ULE0 1092 aa13.15□□□□□ -0.3
RCC1-203ENST00000373833 IL16Q14005 1332 aa13.15□□□□□ -0.3
RCC1-203ENST00000373833 COL22A1Q8NFW1 1626 aaPredicted RBP13.15□□□□□ -0.3
RCC1-203ENST00000373833 PAXIP1Q6ZW49 1069 aaPredicted RBP13.15□□□□□ -0.3
RCC1-203ENST00000373833 FMNL2Q96PY5 1086 aa13.15□□□□□ -0.3
RCC1-203ENST00000373833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.3
RCC1-203ENST00000373833 MS4A1P11836 297 aa13.14□□□□□ -0.31
RCC1-203ENST00000373833 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.14□□□□□ -0.31
RCC1-203ENST00000373833 MEIS3Q99687 375 aa13.14□□□□□ -0.31
RCC1-203ENST00000373833 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
RCC1-203ENST00000373833 PCNTO95613 3336 aa13.13□□□□□ -0.31
RCC1-203ENST00000373833 HOMEZQ8IX15 550 aa13.13□□□□□ -0.31
RCC1-203ENST00000373833 GLI3P10071 1580 aa13.13□□□□□ -0.31
RCC1-203ENST00000373833 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
RCC1-203ENST00000373833 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
RCC1-203ENST00000373833 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
RCC1-203ENST00000373833 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
RCC1-203ENST00000373833 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
RCC1-203ENST00000373833 IGHDP01880 384 aa13.12□□□□□ -0.31
RCC1-203ENST00000373833 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
RCC1-203ENST00000373833 PDIA6Q15084 440 aa13.12□□□□□ -0.31
RCC1-203ENST00000373833 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
RCC1-203ENST00000373833 BARGINQ6ZT62 677 aa13.12□□□□□ -0.31
RCC1-203ENST00000373833 LOC102724428A0A0B4J2F2 783 aa13.12□□□□□ -0.31
RCC1-203ENST00000373833 SNRPA1P09661 255 aaKnown RBP13.12□□□□□ -0.31
RCC1-203ENST00000373833 SIK1P57059 783 aa13.12□□□□□ -0.31
RCC1-203ENST00000373833 LRRC4BQ9NT99 713 aa13.12□□□□□ -0.31
RCC1-203ENST00000373833 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
RCC1-203ENST00000373833 KCNA4P22459 653 aa13.11□□□□□ -0.31
RCC1-203ENST00000373833 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
RCC1-203ENST00000373833 DDRGK1Q96HY6 314 aa13.11□□□□□ -0.31
RCC1-203ENST00000373833 NRAPQ86VF7 1730 aa13.11□□□□□ -0.31
RCC1-203ENST00000373833 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
RCC1-203ENST00000373833 TOGARAM1Q9Y4F4 1720 aa13.1□□□□□ -0.31
RCC1-203ENST00000373833 APBA3O96018 575 aa13.1□□□□□ -0.31
RCC1-203ENST00000373833 EN1Q05925 392 aaPredicted RBP13.1□□□□□ -0.31
RCC1-203ENST00000373833 HLFQ16534 295 aa13.1□□□□□ -0.31
RCC1-203ENST00000373833 MYD88Q99836 296 aa13.1□□□□□ -0.31
RCC1-203ENST00000373833 PDGFDQ9GZP0 370 aaPredicted RBP13.1□□□□□ -0.31
RCC1-203ENST00000373833 SHANK3Q9BYB0 1731 aa13.1□□□□□ -0.31
RCC1-203ENST00000373833 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
RCC1-203ENST00000373833 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
RCC1-203ENST00000373833 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
RCC1-203ENST00000373833 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
RCC1-203ENST00000373833 TNS2Q63HR2 1409 aa13.09□□□□□ -0.31
RCC1-203ENST00000373833 PALLDQ8WX93 1383 aa13.09□□□□□ -0.31
RCC1-203ENST00000373833 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
RCC1-203ENST00000373833 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
RCC1-203ENST00000373833 KLHDC4Q8TBB5 520 aa13.09□□□□□ -0.31
RCC1-203ENST00000373833 CCNL1Q9UK58 526 aaPredicted RBP13.08□□□□□ -0.31
RCC1-203ENST00000373833 CRKLP46109 303 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms