RNA–Protein interactions for RNA: ENST00000373833.10

RCC1-203, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-203ENST00000373833 FMR1Q06787 632 aaKnown RBP eCLIP12.33□□□□□ -0.442e-6■■■■■ 206.2
RCC1-203ENST00000373833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.56□□□□□ -0.565e-7■■■■■ 139.3
RCC1-203ENST00000373833 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.362e-11■■■■■ 62.9
RCC1-203ENST00000373833 ZC3H11AO75152 810 aaKnown RBP eCLIP11.12□□□□□ -0.634e-20■■■■■ 59.1
RCC1-203ENST00000373833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.17□□□□□ -0.623e-7■■■■■ 50
RCC1-203ENST00000373833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.03□□□□□ -0.962e-7■■■■■ 49.3
RCC1-203ENST00000373833 DKC1O60832 514 aaKnown RBP eCLIP11.24□□□□□ -0.611e-323■■■■■ 48.7
RCC1-203ENST00000373833 NCBP2P52298 156 aaKnown RBP eCLIP9.73□□□□□ -0.854e-33■■■■■ 42.7
RCC1-203ENST00000373833 SF3B1O75533 1304 aaKnown RBP eCLIP10.86□□□□□ -0.673e-6■■■■■ 39.6
RCC1-203ENST00000373833 CPSF6Q16630 551 aaKnown RBP eCLIP10.07□□□□□ -0.87e-16■■■■■ 39.3
RCC1-203ENST00000373833 SUB1P53999 127 aaKnown RBP eCLIP8.08□□□□□ -1.124e-8■■■■■ 38
RCC1-203ENST00000373833 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.284e-10■■■■■ 37.7
RCC1-203ENST00000373833 SF3B4Q15427 424 aaKnown RBP eCLIP10.24□□□□□ -0.779e-7■■■■■ 37.3
RCC1-203ENST00000373833 CSTF2P33240 577 aaKnown RBP eCLIP9.74□□□□□ -0.851e-6■■■■■ 30.1
RCC1-203ENST00000373833 DDX3XO00571 662 aaKnown RBP eCLIP11.04□□□□□ -0.644e-14■■■■■ 28.6
RCC1-203ENST00000373833 TIA1P31483 386 aaKnown RBP eCLIP9.77□□□□□ -0.852e-8■■■■■ 27.6
RCC1-203ENST00000373833 KHSRPQ92945 711 aaKnown RBP eCLIP11.08□□□□□ -0.647e-13■■■■■ 27.3
RCC1-203ENST00000373833 RBM22Q9NW64 420 aaKnown RBP eCLIP10.55□□□□□ -0.722e-18■■■■■ 27.1
RCC1-203ENST00000373833 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.66□□□□□ -0.864e-55■■■■□ 25.9
RCC1-203ENST00000373833 EFTUD2Q15029 972 aaKnown RBP eCLIP10.62□□□□□ -0.713e-8■■■■□ 24.7
RCC1-203ENST00000373833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.83□□□□□ -0.685e-7■■■■□ 24.4
RCC1-203ENST00000373833 SF3A3Q12874 501 aaKnown RBP eCLIP11.08□□□□□ -0.642e-8■■■■□ 23.3
RCC1-203ENST00000373833 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.91□□□□□ -0.662e-18■■■■□ 23.2
RCC1-203ENST00000373833 RPS3P23396 243 aaKnown RBP eCLIP10.01□□□□□ -0.812e-8■■■■□ 22.6
RCC1-203ENST00000373833 RBFOX2O43251 390 aaKnown RBP eCLIP8.43□□□□□ -1.068e-7■■■■□ 22
RCC1-203ENST00000373833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.62□□□□□ -0.713e-6■■■■□ 21.6
RCC1-203ENST00000373833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.92□□□□□ -0.663e-9■■■□□ 16.4
RCC1-203ENST00000373833 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.69□□□□□ -0.861e-7■■■□□ 16.3
RCC1-203ENST00000373833 HNRNPKP61978 463 aaKnown RBP eCLIP9.92□□□□□ -0.827e-7■■■□□ 16.2
RCC1-203ENST00000373833 FUSP35637 526 aaKnown RBP eCLIP7.13□□□□□ -1.271e-6■■■□□ 15.1
RCC1-203ENST00000373833 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■■□□ 14.7
RCC1-203ENST00000373833 TIAL1Q01085 375 aaKnown RBP eCLIP10.22□□□□□ -0.775e-7■■□□□ 14.4
RCC1-203ENST00000373833 PABPC4Q13310 644 aaKnown RBP eCLIP11.64□□□□□ -0.552e-7■■□□□ 14.4
RCC1-203ENST00000373833 RBM15Q96T37 977 aaKnown RBP eCLIP10.64□□□□□ -0.711e-8■■□□□ 14.3
RCC1-203ENST00000373833 PPIGQ13427 754 aaKnown RBP eCLIP10.87□□□□□ -0.678e-7■■□□□ 14.1
RCC1-203ENST00000373833 HNRNPCP07910 306 aaKnown RBP eCLIP10.53□□□□□ -0.721e-17■■□□□ 13.5
RCC1-203ENST00000373833 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.473e-26■■□□□ 13.5
RCC1-203ENST00000373833 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.171e-10■■□□□ 13
RCC1-203ENST00000373833 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.993e-44■■□□□ 13
RCC1-203ENST00000373833 SRSF1Q07955 248 aaKnown RBP eCLIP8.88□□□□□ -0.993e-23■■□□□ 12.7
RCC1-203ENST00000373833 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.487e-7■■□□□ 12.5
RCC1-203ENST00000373833 NONOQ15233 471 aaKnown RBP eCLIP11.74□□□□□ -0.534e-6■■□□□ 12.4
RCC1-203ENST00000373833 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■□□□ 12.2
RCC1-203ENST00000373833 GRSF1Q12849 480 aaKnown RBP eCLIP10.31□□□□□ -0.769e-7■■□□□ 12.1
RCC1-203ENST00000373833 TROVE2P10155 538 aaKnown RBP eCLIP10.48□□□□□ -0.732e-6■■□□□ 12
RCC1-203ENST00000373833 YBX3P16989 372 aaKnown RBP eCLIP12.43□□□□□ -0.424e-7■■□□□ 12
RCC1-203ENST00000373833 HNRNPMP52272 730 aaKnown RBP eCLIP15.63■□□□□ 0.095e-6■■□□□ 12
RCC1-203ENST00000373833 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.36□□□□□ -0.751e-8■■□□□ 11.8
RCC1-203ENST00000373833 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.462e-12■■□□□ 11.6
RCC1-203ENST00000373833 AATFQ9NY61 560 aaKnown RBP eCLIP12.47□□□□□ -0.412e-14■□□□□ 11.3
RCC1-203ENST00000373833 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.12□□□□□ -0.793e-18■□□□□ 11.2
RCC1-203ENST00000373833 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.62e-7■□□□□ 10.7
RCC1-203ENST00000373833 GPKOWQ92917 476 aaPredicted RBP eCLIP12.09□□□□□ -0.472e-47■□□□□ 10.3
RCC1-203ENST00000373833 ILF3Q12906 894 aaKnown RBP eCLIP10.01□□□□□ -0.814e-6■□□□□ 10.1
RCC1-203ENST00000373833 PCBP2Q15366 365 aaKnown RBP eCLIP9.9□□□□□ -0.821e-6■□□□□ 9.6
RCC1-203ENST00000373833 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.05□□□□□ -0.645e-43■□□□□ 9.5
RCC1-203ENST00000373833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■□□□□ 9.3
RCC1-203ENST00000373833 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.64□□□□□ -0.711e-6■□□□□ 9.2
RCC1-203ENST00000373833 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.21□□□□□ -0.462e-7■□□□□ 8.2
RCC1-203ENST00000373833 NKRFO15226 690 aaKnown RBP eCLIP11.58□□□□□ -0.563e-6■□□□□ 8.1
Retrieved 60 of 60 RNA–protein pairs in 12.9 ms