RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 ZNF280DQ6N043 979 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 ARHGEF25Q86VW2 580 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 ERBB3P21860 1342 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 IL16Q14005 1332 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 COL14A1Q05707 1796 aaKnown RBP9.29□□□□□ -0.92
BRCC3-203ENST00000369459 LRRC37A3O60309 1634 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 MAPK8IP3Q9UPT6 1336 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 UNCXA6NJT0 531 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 AMPHP49418 695 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 DMTNQ08495 405 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 HDAC1Q13547 482 aaPredicted RBP9.29□□□□□ -0.92
BRCC3-203ENST00000369459 CREBRFQ8IUR6 639 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 PNMA2Q9UL42 364 aa9.29□□□□□ -0.92
BRCC3-203ENST00000369459 GCP02774 474 aa9.28□□□□□ -0.92
BRCC3-203ENST00000369459 TRMT2AQ8IZ69 625 aaKnown RBP9.28□□□□□ -0.92
BRCC3-203ENST00000369459 MICAL1Q8TDZ2 1067 aa9.28□□□□□ -0.92
BRCC3-203ENST00000369459 RAI14Q9P0K7 980 aa9.28□□□□□ -0.92
BRCC3-203ENST00000369459 LMOD3Q0VAK6 560 aa9.28□□□□□ -0.92
BRCC3-203ENST00000369459 ZNF662Q6ZS27 426 aa9.28□□□□□ -0.92
BRCC3-203ENST00000369459 PARP4Q9UKK3 1724 aaKnown RBP9.28□□□□□ -0.92
BRCC3-203ENST00000369459 APAF1O14727 1248 aa9.27□□□□□ -0.93
BRCC3-203ENST00000369459 U2SURPO15042 1029 aaKnown RBP9.27□□□□□ -0.93
BRCC3-203ENST00000369459 EPB41L2O43491 1005 aaKnown RBP9.27□□□□□ -0.93
BRCC3-203ENST00000369459 SATB1Q01826 763 aa9.27□□□□□ -0.93
BRCC3-203ENST00000369459 GOLGA2Q08379 1002 aa9.27□□□□□ -0.93
BRCC3-203ENST00000369459 TCP11L2Q8N4U5 519 aa9.27□□□□□ -0.93
BRCC3-203ENST00000369459 PKD1L3Q7Z443 1732 aa9.27□□□□□ -0.93
BRCC3-203ENST00000369459 CCDC181Q5TID7 509 aa9.27□□□□□ -0.93
BRCC3-203ENST00000369459 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.93
BRCC3-203ENST00000369459 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
BRCC3-203ENST00000369459 KIF4AO95239 1232 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 SSR1P43307 286 aaKnown RBP9.26□□□□□ -0.93
BRCC3-203ENST00000369459 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
BRCC3-203ENST00000369459 MSL3Q8N5Y2 521 aaKnown RBP9.26□□□□□ -0.93
BRCC3-203ENST00000369459 NWD2Q9ULI1 1742 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 PLCH1Q4KWH8 1693 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 MAP4K4O95819 1239 aaPredicted RBP9.26□□□□□ -0.93
BRCC3-203ENST00000369459 TMPOP42166 694 aaKnown RBP9.26□□□□□ -0.93
BRCC3-203ENST00000369459 FOSBP53539 338 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 NFE2L2Q16236 605 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 FBXW7Q969H0 707 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 WNK3Q9BYP7 1800 aa9.26□□□□□ -0.93
BRCC3-203ENST00000369459 RNF123Q5XPI4 1314 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 TOM1O60784 492 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 ERCC3P19447 782 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 HOXD11P31277 338 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-203ENST00000369459 SLFN5Q08AF3 891 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 MAMSTRQ6ZN01 415 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 OVOS2A0A0G2JMS6 1433 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 RGL2O15211 777 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 HTATSF1O43719 755 aaKnown RBP9.25□□□□□ -0.93
BRCC3-203ENST00000369459 PAX3P23760 479 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 SETDB1Q15047 1291 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 ZKSCAN8Q15776 578 aaPredicted RBP9.25□□□□□ -0.93
BRCC3-203ENST00000369459 LONRF3Q496Y0 759 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 POTEDQ86YR6 584 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 CCDC146Q8IYE0 955 aa9.25□□□□□ -0.93
BRCC3-203ENST00000369459 LRRC59Q96AG4 307 aaKnown RBP9.25□□□□□ -0.93
BRCC3-203ENST00000369459 KIF20AO95235 890 aa9.24□□□□□ -0.93
BRCC3-203ENST00000369459 PRKAR2BP31323 418 aa9.24□□□□□ -0.93
BRCC3-203ENST00000369459 ANP32AP39687 249 aaKnown RBP9.24□□□□□ -0.93
BRCC3-203ENST00000369459 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-203ENST00000369459 MKL1Q969V6 931 aa9.24□□□□□ -0.93
BRCC3-203ENST00000369459 FBLN1P23142 703 aa9.24□□□□□ -0.93
BRCC3-203ENST00000369459 NUB1Q9Y5A7 615 aa9.24□□□□□ -0.93
BRCC3-203ENST00000369459 ANKRD62A6NC57 917 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 IPO8O15397 1037 aaKnown RBP9.23□□□□□ -0.93
BRCC3-203ENST00000369459 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 PIK3R5Q8WYR1 880 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 RRAGDQ9NQL2 400 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-203ENST00000369459 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 EYA1Q99502 592 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 SLC24A3Q9HC58 644 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 BSDC1Q9NW68 430 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-203ENST00000369459 SIPA1L3O60292 1781 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-203ENST00000369459 CACNA1FO60840 1977 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 NRAPQ86VF7 1730 aa9.23□□□□□ -0.93
BRCC3-203ENST00000369459 RAB11FIP3O75154 756 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 XPCQ01831 940 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-203ENST00000369459 DUSP27Q5VZP5 1158 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 ZKSCAN2Q63HK3 967 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 LMOD2Q6P5Q4 547 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 GAS2L2Q8NHY3 880 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 CXorf38Q8TB03 319 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 IGSF5Q9NSI5 407 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 MRVI1Q9Y6F6 885 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 SCN11AQ9UI33 1791 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 SULT6B1Q6IMI4 303 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
BRCC3-203ENST00000369459 ZFYVE27Q5T4F4 411 aa9.21□□□□□ -0.93
BRCC3-203ENST00000369459 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.21□□□□□ -0.93
BRCC3-203ENST00000369459 RIPK4P57078 832 aa9.21□□□□□ -0.94
BRCC3-203ENST00000369459 BABAM1Q9NWV8 329 aa9.21□□□□□ -0.94
BRCC3-203ENST00000369459 KDM3BQ7LBC6 1761 aa9.21□□□□□ -0.94
BRCC3-203ENST00000369459 RETREG2Q8NC44 543 aa9.2□□□□□ -0.94
BRCC3-203ENST00000369459 CCDC97Q96F63 343 aaPredicted RBP9.2□□□□□ -0.94
BRCC3-203ENST00000369459 COL5A2P05997 1499 aaPredicted RBP9.2□□□□□ -0.94
BRCC3-203ENST00000369459 AMOTQ4VCS5 1084 aa9.2□□□□□ -0.94
BRCC3-203ENST00000369459 ANKRD24Q8TF21 1146 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms