RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 DDX11Q96FC9 970 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 ZBTB3Q9H5J0 574 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 R3HCC1Q9Y3T6 440 aaKnown RBP10.1□□□□□ -0.79
PTPRK-206ENST00000368215 CEP152O94986 1710 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 POLR1AO95602 1720 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-206ENST00000368215 PDCP20941 246 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-206ENST00000368215 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
PTPRK-206ENST00000368215 USP19O94966 1318 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 GSPT1P15170 499 aaKnown RBP10.1□□□□□ -0.79
PTPRK-206ENST00000368215 CCDC57Q2TAC2 916 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 CPLX2Q6PUV4 134 aaKnown RBP10.1□□□□□ -0.79
PTPRK-206ENST00000368215 SASS6Q6UVJ0 657 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 COPS6Q7L5N1 327 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 XAGE3Q8WTP9 111 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 IP6K1Q92551 441 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 TCEANC2Q96MN5 208 aa10.1□□□□□ -0.79
PTPRK-206ENST00000368215 TTC39AQ5SRH9 613 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 CNNM1Q9NRU3 951 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 CCDC158Q5M9N0 1113 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 CCDC73Q6ZRK6 1079 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 IFNL2Q8IZJ0 200 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 STK11IPQ8N1F8 1099 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 NFATC2IPQ8NCF5 419 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 IL17REQ8NFR9 667 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 GLI2P10070 1586 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 ABCA9Q8IUA7 1624 aa10.09□□□□□ -0.79
PTPRK-206ENST00000368215 ADGRB3O60242 1522 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 RAB3GAP1Q15042 981 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 SYNE3Q6ZMZ3 975 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 CREBRFQ8IUR6 639 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 DTNBO60941 627 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 FMNL2Q96PY5 1086 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 LIMCH1Q9UPQ0 1083 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 PPRC1Q5VV67 1664 aaKnown RBP10.08□□□□□ -0.8
PTPRK-206ENST00000368215 KCNQ3O43525 872 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 PPFIA3O75145 1194 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 TPM4P67936 248 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 KSR2Q6VAB6 950 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 FAM135BQ49AJ0 1406 aa10.08□□□□□ -0.8
PTPRK-206ENST00000368215 NBPF7P0C2Y1 421 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-206ENST00000368215 CHMLP26374 656 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 KRT85P78386 507 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 VPS37DQ86XT2 251 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 SIRT2Q8IXJ6 389 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 SPC24Q8NBT2 197 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 BCL11BQ9C0K0 894 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-206ENST00000368215 GRM8O00222 908 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 ZSCAN31Q96LW9 406 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-206ENST00000368215 SOS1Q07889 1333 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-206ENST00000368215 ANKRD1Q15327 319 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 SIRT1Q96EB6 747 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 ARHGAP31Q2M1Z3 1444 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 ZNF853P0CG23 659 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 TRIM29Q14134 588 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 KLHL40Q2TBA0 621 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-206ENST00000368215 CHMP4CQ96CF2 233 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 EVI5LQ96CN4 794 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 SDF4Q9BRK5 362 aa10.07□□□□□ -0.8
PTPRK-206ENST00000368215 RNMTO43148 476 aaKnown RBP10.06□□□□□ -0.8
PTPRK-206ENST00000368215 NECAB1Q8N987 351 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 LAMC1P11047 1609 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 CPA1P15085 419 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
PTPRK-206ENST00000368215 ZNF592Q92610 1267 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 DDX17Q92841 729 aaKnown RBP10.06□□□□□ -0.8
PTPRK-206ENST00000368215 RTL1A6NKG5 1358 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 AATKQ6ZMQ8 1374 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 ATP7BP35670 1465 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 RRP12Q5JTH9 1297 aaKnown RBP10.06□□□□□ -0.8
PTPRK-206ENST00000368215 TULP4Q9NRJ4 1543 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
PTPRK-206ENST00000368215 CAMK4Q16566 473 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 SNRKQ9NRH2 765 aa10.06□□□□□ -0.8
PTPRK-206ENST00000368215 ATP2B1P20020 1258 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 RASSF8Q8NHQ8 419 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 SPATA32Q96LK8 384 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 GPTP24298 496 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 GJB2P29033 226 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 DDX46Q7L014 1031 aaKnown RBP10.05□□□□□ -0.8
PTPRK-206ENST00000368215 KLHDC4Q8TBB5 520 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 TRIM5Q9C035 493 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 INO80Q9ULG1 1556 aaPredicted RBP10.05□□□□□ -0.8
PTPRK-206ENST00000368215 QRICH2Q9H0J4 1663 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 TBC1D2BQ9UPU7 963 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 KAT6BQ8WYB5 2073 aa10.05□□□□□ -0.8
PTPRK-206ENST00000368215 KIAA0232Q92628 1395 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 GOLIM4O00461 696 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 IFIT1P09914 478 aaKnown RBP10.04□□□□□ -0.8
PTPRK-206ENST00000368215 ZSCAN23Q3MJ62 389 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 TMOD3Q9NYL9 352 aa10.04□□□□□ -0.8
PTPRK-206ENST00000368215 STX6O43752 255 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms