RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 GCOM1H8Y6P7 765 aaPredicted RBP18.21■□□□□ 0.51
FBXO28-201ENST00000366862 CCDC175P0C221 793 aa18.21■□□□□ 0.51
FBXO28-201ENST00000366862 MYZAPP0CAP1 466 aa18.21■□□□□ 0.51
FBXO28-201ENST00000366862 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
FBXO28-201ENST00000366862 GIGYF2Q6Y7W6 1299 aaKnown RBP18.2■□□□□ 0.5
FBXO28-201ENST00000366862 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
FBXO28-201ENST00000366862 PHAXQ9H814 394 aaKnown RBP18.2■□□□□ 0.5
FBXO28-201ENST00000366862 PRAM1Q96QH2 718 aa18.2■□□□□ 0.5
FBXO28-201ENST00000366862 USP48Q86UV5 1035 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 STK11IPQ8N1F8 1099 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 CNNM3Q8NE01 707 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
FBXO28-201ENST00000366862 TTC12Q9H892 705 aaPredicted RBP18.19■□□□□ 0.5
FBXO28-201ENST00000366862 RSPH14Q9UHP6 348 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 CCDC91Q7Z6B0 441 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 ANAPC15P60006 121 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 ALS2CR12Q96Q35 445 aa18.19■□□□□ 0.5
FBXO28-201ENST00000366862 TTC31Q49AM3 519 aaPredicted RBP18.18■□□□□ 0.5
FBXO28-201ENST00000366862 CDK19Q9BWU1 502 aa18.18■□□□□ 0.5
FBXO28-201ENST00000366862 SPECC1LQ69YQ0 1117 aa18.18■□□□□ 0.5
FBXO28-201ENST00000366862 UBAC1Q9BSL1 405 aa18.18■□□□□ 0.5
FBXO28-201ENST00000366862 CABP1Q9NZU7 370 aa18.18■□□□□ 0.5
FBXO28-201ENST00000366862 SOGA3Q5TF21 947 aa18.18■□□□□ 0.5
FBXO28-201ENST00000366862 RASSF4Q9H2L5 321 aa18.18■□□□□ 0.5
FBXO28-201ENST00000366862 CKAP4Q07065 602 aaKnown RBP18.17■□□□□ 0.5
FBXO28-201ENST00000366862 ANO6Q4KMQ2 910 aa18.17■□□□□ 0.5
FBXO28-201ENST00000366862 CNNM1Q9NRU3 951 aa18.17■□□□□ 0.5
FBXO28-201ENST00000366862 GNL3LQ9NVN8 582 aaKnown RBP18.17■□□□□ 0.5
FBXO28-201ENST00000366862 TFIP11Q9UBB9 837 aaKnown RBP18.17■□□□□ 0.5
FBXO28-201ENST00000366862 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
FBXO28-201ENST00000366862 PTPRCP08575 1304 aa18.17■□□□□ 0.5
FBXO28-201ENST00000366862 FBXO3Q9UK99 471 aa18.17■□□□□ 0.5
FBXO28-201ENST00000366862 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
FBXO28-201ENST00000366862 KLHL10Q6JEL2 608 aa18.17■□□□□ 0.5
FBXO28-201ENST00000366862 TMX1Q9H3N1 280 aa18.17■□□□□ 0.5
FBXO28-201ENST00000366862 V9GYY5 206 aaPredicted RBP18.17■□□□□ 0.5
FBXO28-201ENST00000366862 GABPB1Q06547 395 aaPredicted RBP18.16■□□□□ 0.5
FBXO28-201ENST00000366862 IL16Q14005 1332 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 DNAI1Q9UI46 699 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 RPGRIP1LQ68CZ1 1315 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 HSF2BPO75031 334 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 HSPA4P34932 840 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 CEP112Q8N8E3 955 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 CTAGE15A4D2H0 777 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 CTAGE8P0CG41 777 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 KIF6Q6ZMV9 814 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 CTAGE6Q86UF2 777 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 CTAGE4Q8IX94 777 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 CAPN2P17655 700 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
FBXO28-201ENST00000366862 CPLX3Q8WVH0 158 aa18.16■□□□□ 0.5
FBXO28-201ENST00000366862 FGFR1OPO95684 399 aaKnown RBP18.15■□□□□ 0.5
FBXO28-201ENST00000366862 CCDC113Q9H0I3 377 aa18.15■□□□□ 0.5
FBXO28-201ENST00000366862 TOP2BQ02880 1626 aa18.15■□□□□ 0.5
FBXO28-201ENST00000366862 TROQ12816 1431 aaPredicted RBP18.15■□□□□ 0.5
FBXO28-201ENST00000366862 RPRD2Q5VT52 1461 aaKnown RBP18.15■□□□□ 0.5
FBXO28-201ENST00000366862 GOLGA1Q92805 767 aa18.15■□□□□ 0.5
FBXO28-201ENST00000366862 ZHX3Q9H4I2 956 aa18.14■□□□□ 0.5
FBXO28-201ENST00000366862 NLRP2Q9NX02 1062 aa18.14■□□□□ 0.5
FBXO28-201ENST00000366862 BCCIPQ9P287 314 aaKnown RBP eCLIP18.14■□□□□ 0.5
FBXO28-201ENST00000366862 CNPY2Q9Y2B0 182 aa18.14■□□□□ 0.5
FBXO28-201ENST00000366862 KANK3Q6NY19 840 aa18.14■□□□□ 0.49
FBXO28-201ENST00000366862 CACNA2D4Q7Z3S7 1137 aa18.14■□□□□ 0.49
FBXO28-201ENST00000366862 VPS36Q86VN1 386 aa18.14■□□□□ 0.49
FBXO28-201ENST00000366862 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
FBXO28-201ENST00000366862 SEPT11Q9NVA2 429 aaKnown RBP18.14■□□□□ 0.49
FBXO28-201ENST00000366862 CEP126Q9P2H0 1117 aa18.14■□□□□ 0.49
FBXO28-201ENST00000366862 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 OPA1O60313 960 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 TUBBP07437 444 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 HMG20BQ9P0W2 317 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 SPECC1Q5M775 1068 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 MICALL1Q8N3F8 863 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 MYRIPQ8NFW9 859 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 ARHGAP45Q92619 1136 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 PCDHB15Q9Y5E8 787 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
FBXO28-201ENST00000366862 BIN1O00499 593 aa18.12■□□□□ 0.49
FBXO28-201ENST00000366862 UBASH3AP57075 661 aa18.12■□□□□ 0.49
FBXO28-201ENST00000366862 NBPF11Q86T75 865 aa18.12■□□□□ 0.49
FBXO28-201ENST00000366862 TSG101Q99816 390 aa18.12■□□□□ 0.49
FBXO28-201ENST00000366862 MCM6Q14566 821 aa18.12■□□□□ 0.49
FBXO28-201ENST00000366862 MAATS1Q7Z4T9 603 aa18.12■□□□□ 0.49
FBXO28-201ENST00000366862 ZSWIM4Q9H7M6 989 aa18.12■□□□□ 0.49
FBXO28-201ENST00000366862 F13A1P00488 732 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 TDO2P48775 406 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 HLTFQ14527 1009 aaKnown RBP eCLIP18.11■□□□□ 0.49
FBXO28-201ENST00000366862 ZFP91Q96JP5 570 aaPredicted RBP18.11■□□□□ 0.49
FBXO28-201ENST00000366862 EBAG9O00559 213 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 ERO1AQ96HE7 468 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 GUCY1B3Q02153 619 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 A0A1B0GUL7 405 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 CETN2P41208 172 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 CCDC102BQ68D86 513 aa18.11■□□□□ 0.49
FBXO28-201ENST00000366862 PYM1Q9BRP8 204 aaKnown RBP18.11■□□□□ 0.49
FBXO28-201ENST00000366862 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
FBXO28-201ENST00000366862 TAOK3Q9H2K8 898 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms