RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 WDR63Q8IWG1 891 aa24.88■■□□□ 1.57
HLA-DRB1-201ENST00000360004 COL5A3P25940 1745 aaPredicted RBP24.87■■□□□ 1.57
HLA-DRB1-201ENST00000360004 RPS6KA4O75676 772 aa24.87■■□□□ 1.57
HLA-DRB1-201ENST00000360004 IL16Q14005 1332 aa24.86■■□□□ 1.57
HLA-DRB1-201ENST00000360004 CICQ96RK0 1608 aaPredicted RBP24.86■■□□□ 1.57
HLA-DRB1-201ENST00000360004 PRAMEF22A3QJZ6 481 aa24.86■■□□□ 1.57
HLA-DRB1-201ENST00000360004 GIGYF1O75420 1035 aaPredicted RBP24.86■■□□□ 1.57
HLA-DRB1-201ENST00000360004 USP16Q9Y5T5 823 aa24.86■■□□□ 1.57
HLA-DRB1-201ENST00000360004 ZBTB7AO95365 584 aa24.85■■□□□ 1.57
HLA-DRB1-201ENST00000360004 RFC4P35249 363 aa24.85■■□□□ 1.57
HLA-DRB1-201ENST00000360004 INTS5Q6P9B9 1019 aaKnown RBP24.85■■□□□ 1.57
HLA-DRB1-201ENST00000360004 SMIM5Q71RC9 77 aa24.85■■□□□ 1.57
HLA-DRB1-201ENST00000360004 COL23A1Q86Y22 540 aaPredicted RBP24.85■■□□□ 1.57
HLA-DRB1-201ENST00000360004 ARXQ96QS3 562 aa24.85■■□□□ 1.57
HLA-DRB1-201ENST00000360004 ZBTB1Q9Y2K1 713 aa24.85■■□□□ 1.57
HLA-DRB1-201ENST00000360004 ZNF853P0CG23 659 aa24.84■■□□□ 1.57
HLA-DRB1-201ENST00000360004 ADRA2BP18089 450 aa24.84■■□□□ 1.57
HLA-DRB1-201ENST00000360004 EIF2S2P20042 333 aaKnown RBP24.84■■□□□ 1.57
HLA-DRB1-201ENST00000360004 PDGFDQ9GZP0 370 aaPredicted RBP24.84■■□□□ 1.57
HLA-DRB1-201ENST00000360004 A1BGP04217 495 aa24.83■■□□□ 1.57
HLA-DRB1-201ENST00000360004 TSR2Q969E8 191 aaKnown RBP24.83■■□□□ 1.57
HLA-DRB1-201ENST00000360004 MYH16Q9H6N6 1097 aa24.83■■□□□ 1.57
HLA-DRB1-201ENST00000360004 HNRNPUQ00839 825 aaKnown RBP eCLIP24.82■■□□□ 1.56
HLA-DRB1-201ENST00000360004 SLC16A10Q8TF71 515 aa24.82■■□□□ 1.56
HLA-DRB1-201ENST00000360004 SPON1Q9HCB6 807 aa24.81■■□□□ 1.56
HLA-DRB1-201ENST00000360004 ATF5Q9Y2D1 282 aaPredicted RBP24.81■■□□□ 1.56
HLA-DRB1-201ENST00000360004 TUBGCP6Q96RT7 1819 aa24.81■■□□□ 1.56
HLA-DRB1-201ENST00000360004 QSER1Q2KHR3 1735 aa24.81■■□□□ 1.56
HLA-DRB1-201ENST00000360004 A0A087WZG4 1122 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 GOLGA2Q08379 1002 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 KRT24Q2M2I5 525 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 AMIGO3Q86WK7 504 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 NECTIN2Q92692 538 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 ARHGEF1Q92888 912 aaKnown RBP24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 MTFR1LQ9H019 292 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 UBR3Q6ZT12 1888 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 SOS1Q07889 1333 aaPredicted RBP24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 COL15A1P39059 1388 aa24.8■■□□□ 1.56
HLA-DRB1-201ENST00000360004 ELL2O00472 640 aaPredicted RBP24.79■■□□□ 1.56
HLA-DRB1-201ENST00000360004 ZPR1O75312 459 aa24.79■■□□□ 1.56
HLA-DRB1-201ENST00000360004 PIP4K2AP48426 406 aaPredicted RBP24.79■■□□□ 1.56
HLA-DRB1-201ENST00000360004 DUSP27Q5VZP5 1158 aa24.79■■□□□ 1.56
HLA-DRB1-201ENST00000360004 IL6STP40189 918 aaPredicted RBP24.78■■□□□ 1.56
HLA-DRB1-201ENST00000360004 HDGFL1Q5TGJ6 251 aa24.78■■□□□ 1.56
HLA-DRB1-201ENST00000360004 MSL1Q68DK7 614 aa24.78■■□□□ 1.56
HLA-DRB1-201ENST00000360004 LAMB4A4D0S4 1761 aa24.77■■□□□ 1.56
HLA-DRB1-201ENST00000360004 HOXB7P09629 217 aa24.77■■□□□ 1.56
HLA-DRB1-201ENST00000360004 POLD1P28340 1107 aa24.77■■□□□ 1.56
HLA-DRB1-201ENST00000360004 CHMP4AQ9BY43 222 aa24.77■■□□□ 1.56
HLA-DRB1-201ENST00000360004 FANCIQ9NVI1 1328 aa24.77■■□□□ 1.56
HLA-DRB1-201ENST00000360004 CASZ1Q86V15 1759 aa24.77■■□□□ 1.56
HLA-DRB1-201ENST00000360004 MYH14Q7Z406 1995 aaKnown RBP24.76■■□□□ 1.55
HLA-DRB1-201ENST00000360004 MYL6BP14649 208 aa24.76■■□□□ 1.55
HLA-DRB1-201ENST00000360004 PPP1R1BQ9UD71 204 aaPredicted RBP24.76■■□□□ 1.55
HLA-DRB1-201ENST00000360004 EIF5P55010 431 aaKnown RBP24.74■■□□□ 1.55
HLA-DRB1-201ENST00000360004 ERBB4Q15303 1308 aa24.74■■□□□ 1.55
HLA-DRB1-201ENST00000360004 ZNF521Q96K83 1311 aa24.73■■□□□ 1.55
HLA-DRB1-201ENST00000360004 E9PSI1 815 aa24.73■■□□□ 1.55
HLA-DRB1-201ENST00000360004 C8orf58Q8NAV2 365 aa24.73■■□□□ 1.55
HLA-DRB1-201ENST00000360004 SRP68Q9UHB9 627 aaKnown RBP24.73■■□□□ 1.55
HLA-DRB1-201ENST00000360004 TWISTNBQ3B726 338 aaPredicted RBP24.72■■□□□ 1.55
HLA-DRB1-201ENST00000360004 USPL1Q5W0Q7 1092 aa24.72■■□□□ 1.55
HLA-DRB1-201ENST00000360004 DZIP3Q86Y13 1208 aaKnown RBP24.72■■□□□ 1.55
HLA-DRB1-201ENST00000360004 TBC1D2BQ9UPU7 963 aa24.72■■□□□ 1.55
HLA-DRB1-201ENST00000360004 USP42Q9H9J4 1324 aaKnown RBP24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 NBPF26B4DH59 902 aa24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 NBPF10Q6P3W6 841 aaKnown RBP24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 KIF6Q6ZMV9 814 aa24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 NLGN1Q8N2Q7 840 aa24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 NBPF15Q8N660 670 aa24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 SPINK5Q9NQ38 1064 aaPredicted RBP24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 NARFQ9UHQ1 456 aa24.71■■□□□ 1.55
HLA-DRB1-201ENST00000360004 EXOSC9Q06265 439 aaKnown RBP24.7■■□□□ 1.54
HLA-DRB1-201ENST00000360004 CCDC30Q5VVM6 783 aa24.69■■□□□ 1.54
HLA-DRB1-201ENST00000360004 STK31Q9BXU1 1019 aa24.69■■□□□ 1.54
HLA-DRB1-201ENST00000360004 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
HLA-DRB1-201ENST00000360004 GYS1P13807 737 aa24.68■■□□□ 1.54
HLA-DRB1-201ENST00000360004 TSPYL6Q8N831 410 aa24.68■■□□□ 1.54
HLA-DRB1-201ENST00000360004 CHPF2Q9P2E5 772 aa24.68■■□□□ 1.54
HLA-DRB1-201ENST00000360004 C4AP0C0L4 1744 aa24.67■■□□□ 1.54
HLA-DRB1-201ENST00000360004 ANXA1P04083 346 aa24.67■■□□□ 1.54
HLA-DRB1-201ENST00000360004 KLHL34Q8N239 644 aa24.67■■□□□ 1.54
HLA-DRB1-201ENST00000360004 DDX21Q9NR30 783 aaKnown RBP eCLIP24.67■■□□□ 1.54
HLA-DRB1-201ENST00000360004 ZNF652Q9Y2D9 606 aa24.67■■□□□ 1.54
HLA-DRB1-201ENST00000360004 SLFN5Q08AF3 891 aa24.66■■□□□ 1.54
HLA-DRB1-201ENST00000360004 AIMP1Q12904 312 aaKnown RBP24.66■■□□□ 1.54
HLA-DRB1-201ENST00000360004 CDCA7LQ96GN5 454 aa24.66■■□□□ 1.54
HLA-DRB1-201ENST00000360004 PARP3Q9Y6F1 533 aa24.65■■□□□ 1.54
HLA-DRB1-201ENST00000360004 MMP10P09238 476 aa24.64■■□□□ 1.54
HLA-DRB1-201ENST00000360004 FKBP8Q14318 412 aa24.64■■□□□ 1.54
HLA-DRB1-201ENST00000360004 PROSER3Q2NL68 480 aa24.64■■□□□ 1.54
HLA-DRB1-201ENST00000360004 BICDL1Q6ZP65 573 aa24.64■■□□□ 1.54
HLA-DRB1-201ENST00000360004 HYPKQ9NX55 129 aa24.64■■□□□ 1.54
HLA-DRB1-201ENST00000360004 PTGER2P43116 358 aa24.63■■□□□ 1.53
HLA-DRB1-201ENST00000360004 LRP5O75197 1615 aa24.62■■□□□ 1.53
HLA-DRB1-201ENST00000360004 TCERG1O14776 1098 aaKnown RBP24.62■■□□□ 1.53
HLA-DRB1-201ENST00000360004 PDIA6Q15084 440 aa24.62■■□□□ 1.53
HLA-DRB1-201ENST00000360004 XAGE3Q8WTP9 111 aa24.62■■□□□ 1.53
HLA-DRB1-201ENST00000360004 ZBTB3Q9H5J0 574 aa24.62■■□□□ 1.53
HLA-DRB1-201ENST00000360004 NPHP1O15259 732 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms