RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 CWC27Q6UX04 472 aaKnown RBP25.1■■□□□ 1.61
TRIM3-202ENST00000359518 SRCIN1Q9C0H9 1055 aa25.1■■□□□ 1.61
TRIM3-202ENST00000359518 SOS1Q07889 1333 aaPredicted RBP25.1■■□□□ 1.61
TRIM3-202ENST00000359518 HS1BP3Q53T59 392 aa25.1■■□□□ 1.61
TRIM3-202ENST00000359518 FAM13BQ9NYF5 915 aa25.1■■□□□ 1.61
TRIM3-202ENST00000359518 KDRP35968 1356 aa25.1■■□□□ 1.61
TRIM3-202ENST00000359518 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
TRIM3-202ENST00000359518 RASEFQ8IZ41 740 aa25.09■■□□□ 1.61
TRIM3-202ENST00000359518 RHPN1Q8TCX5 695 aa25.09■■□□□ 1.61
TRIM3-202ENST00000359518 ARID3AQ99856 593 aa25.09■■□□□ 1.61
TRIM3-202ENST00000359518 CNPY2Q9Y2B0 182 aa25.09■■□□□ 1.61
TRIM3-202ENST00000359518 RGPD1P0DJD0 1748 aa25.08■■□□□ 1.61
TRIM3-202ENST00000359518 HSPA4P34932 840 aa25.08■■□□□ 1.61
TRIM3-202ENST00000359518 HOXC9P31274 260 aa25.08■■□□□ 1.61
TRIM3-202ENST00000359518 SSH3Q8TE77 659 aa25.07■■□□□ 1.6
TRIM3-202ENST00000359518 TTC21AQ8NDW8 1320 aa25.07■■□□□ 1.6
TRIM3-202ENST00000359518 TCHHQ07283 1943 aa25.07■■□□□ 1.6
TRIM3-202ENST00000359518 PTPRUQ92729 1446 aa25.07■■□□□ 1.6
TRIM3-202ENST00000359518 ZNF500O60304 480 aaPredicted RBP25.07■■□□□ 1.6
TRIM3-202ENST00000359518 ZNF830Q96NB3 372 aaPredicted RBP25.07■■□□□ 1.6
TRIM3-202ENST00000359518 OS9Q13438 667 aaPredicted RBP25.06■■□□□ 1.6
TRIM3-202ENST00000359518 ABTB2Q8N961 1025 aa25.06■■□□□ 1.6
TRIM3-202ENST00000359518 SNX14Q9Y5W7 946 aa25.06■■□□□ 1.6
TRIM3-202ENST00000359518 WDR33Q9C0J8 1336 aaKnown RBP25.06■■□□□ 1.6
TRIM3-202ENST00000359518 SSH2Q76I76 1423 aa25.06■■□□□ 1.6
TRIM3-202ENST00000359518 PI4K2BQ8TCG2 481 aa25.06■■□□□ 1.6
TRIM3-202ENST00000359518 CCDC39Q9UFE4 941 aa25.06■■□□□ 1.6
TRIM3-202ENST00000359518 SYAP1Q96A49 352 aaPredicted RBP25.05■■□□□ 1.6
TRIM3-202ENST00000359518 AK2P54819 239 aa25.05■■□□□ 1.6
TRIM3-202ENST00000359518 PI4KAP2A4QPH2 592 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 KCNQ3O43525 872 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 PI4KAP1Q8N8J0 262 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 CHPF2Q9P2E5 772 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 UQCRHLA0A096LP55 91 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 SGSM2O43147 1006 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 FIBPO43427 364 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 UQCRHP07919 91 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 LGR6Q9HBX8 967 aa25.04■■□□□ 1.6
TRIM3-202ENST00000359518 MAP3K5Q99683 1374 aa25.03■■□□□ 1.6
TRIM3-202ENST00000359518 PLCB2Q00722 1185 aa25.03■■□□□ 1.6
TRIM3-202ENST00000359518 USP25Q9UHP3 1055 aa25.03■■□□□ 1.6
TRIM3-202ENST00000359518 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
TRIM3-202ENST00000359518 EID1Q9Y6B2 187 aa25.03■■□□□ 1.6
TRIM3-202ENST00000359518 HTATSF1O43719 755 aaKnown RBP25.02■■□□□ 1.6
TRIM3-202ENST00000359518 RUFY3Q7L099 469 aa25.02■■□□□ 1.6
TRIM3-202ENST00000359518 RAD50Q92878 1312 aa25.01■■□□□ 1.59
TRIM3-202ENST00000359518 CASTP20810 708 aaKnown RBP25.01■■□□□ 1.59
TRIM3-202ENST00000359518 LARGE1O95461 756 aa25.01■■□□□ 1.59
TRIM3-202ENST00000359518 KIF1BPQ96EK5 621 aa25.01■■□□□ 1.59
TRIM3-202ENST00000359518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.01■■□□□ 1.59
TRIM3-202ENST00000359518 SETD1BQ9UPS6 1966 aaKnown RBP25.01■■□□□ 1.59
TRIM3-202ENST00000359518 HCLS1P14317 486 aaPredicted RBP25■■□□□ 1.59
TRIM3-202ENST00000359518 SYT1P21579 422 aa25■■□□□ 1.59
TRIM3-202ENST00000359518 CNTROBQ8N137 903 aa25■■□□□ 1.59
TRIM3-202ENST00000359518 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
TRIM3-202ENST00000359518 LSG1Q9H089 658 aaKnown RBP25■■□□□ 1.59
TRIM3-202ENST00000359518 RPAP1Q9BWH6 1393 aaPredicted RBP25■■□□□ 1.59
TRIM3-202ENST00000359518 RAB11FIP3O75154 756 aa24.99■■□□□ 1.59
TRIM3-202ENST00000359518 SMC3Q9UQE7 1217 aa24.99■■□□□ 1.59
TRIM3-202ENST00000359518 NALCNQ8IZF0 1738 aa24.99■■□□□ 1.59
TRIM3-202ENST00000359518 CCDC83Q8IWF9 413 aa24.99■■□□□ 1.59
TRIM3-202ENST00000359518 ZMYND15Q9H091 742 aa24.99■■□□□ 1.59
TRIM3-202ENST00000359518 PDCL3Q9H2J4 239 aa24.99■■□□□ 1.59
TRIM3-202ENST00000359518 STX6O43752 255 aa24.98■■□□□ 1.59
TRIM3-202ENST00000359518 DNTTIP2Q5QJE6 756 aaKnown RBP24.98■■□□□ 1.59
TRIM3-202ENST00000359518 ZSCAN22P10073 491 aaPredicted RBP24.98■■□□□ 1.59
TRIM3-202ENST00000359518 POLA2Q14181 598 aa24.98■■□□□ 1.59
TRIM3-202ENST00000359518 PA2G4Q9UQ80 394 aaKnown RBP24.98■■□□□ 1.59
TRIM3-202ENST00000359518 C17orf53Q8N3J3 647 aaPredicted RBP24.97■■□□□ 1.59
TRIM3-202ENST00000359518 DNAAF4Q8WXU2 420 aa24.97■■□□□ 1.59
TRIM3-202ENST00000359518 LIMCH1Q9UPQ0 1083 aa24.97■■□□□ 1.59
TRIM3-202ENST00000359518 PLEKHG1Q9ULL1 1385 aa24.97■■□□□ 1.59
TRIM3-202ENST00000359518 PHF14O94880 888 aa24.97■■□□□ 1.59
TRIM3-202ENST00000359518 PTH1RQ03431 593 aa24.97■■□□□ 1.59
TRIM3-202ENST00000359518 TTC14Q96N46 770 aa24.97■■□□□ 1.59
TRIM3-202ENST00000359518 DIAPH3Q9NSV4 1193 aa24.97■■□□□ 1.59
TRIM3-202ENST00000359518 ADCK5Q3MIX3 580 aa24.96■■□□□ 1.59
TRIM3-202ENST00000359518 PRPF40BQ6NWY9 871 aaKnown RBP24.96■■□□□ 1.59
TRIM3-202ENST00000359518 XRN1Q8IZH2 1706 aaKnown RBP24.96■■□□□ 1.59
TRIM3-202ENST00000359518 AOX1Q06278 1338 aa24.96■■□□□ 1.59
TRIM3-202ENST00000359518 TOPAZ1Q8N9V7 1692 aa24.96■■□□□ 1.59
TRIM3-202ENST00000359518 RGPD8O14715 1765 aaPredicted RBP24.96■■□□□ 1.59
TRIM3-202ENST00000359518 JAKMIP1Q96N16 626 aaKnown RBP24.96■■□□□ 1.59
TRIM3-202ENST00000359518 FMN2Q9NZ56 1722 aa24.95■■□□□ 1.59
TRIM3-202ENST00000359518 TTC12Q9H892 705 aaPredicted RBP24.95■■□□□ 1.58
TRIM3-202ENST00000359518 CHMP3Q9Y3E7 222 aa24.95■■□□□ 1.58
TRIM3-202ENST00000359518 TUBGCP6Q96RT7 1819 aa24.95■■□□□ 1.58
TRIM3-202ENST00000359518 KIF13AQ9H1H9 1805 aa24.95■■□□□ 1.58
TRIM3-202ENST00000359518 BEND3Q5T5X7 828 aa24.95■■□□□ 1.58
TRIM3-202ENST00000359518 GIMAP6Q6P9H5 292 aa24.95■■□□□ 1.58
TRIM3-202ENST00000359518 JARID2Q92833 1246 aaPredicted RBP24.94■■□□□ 1.58
TRIM3-202ENST00000359518 EIF4A1P60842 406 aaKnown RBP24.94■■□□□ 1.58
TRIM3-202ENST00000359518 MPRIPQ6WCQ1 1025 aa24.94■■□□□ 1.58
TRIM3-202ENST00000359518 DNM1Q05193 864 aaKnown RBP24.94■■□□□ 1.58
TRIM3-202ENST00000359518 CSPP1Q1MSJ5 1256 aa24.94■■□□□ 1.58
TRIM3-202ENST00000359518 CCDC183Q5T5S1 534 aa24.94■■□□□ 1.58
TRIM3-202ENST00000359518 NECAB1Q8N987 351 aa24.94■■□□□ 1.58
TRIM3-202ENST00000359518 UBR1Q8IWV7 1749 aa24.93■■□□□ 1.58
TRIM3-202ENST00000359518 VPS37CA5D8V6 355 aaPredicted RBP24.93■■□□□ 1.58
TRIM3-202ENST00000359518 NBPF6Q5VWK0 638 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms