RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 TUBB4AP04350 444 aa16.81■□□□□ 0.28
NUP98-203ENST00000359171 IPO4Q8TEX9 1081 aaKnown RBP16.81■□□□□ 0.28
NUP98-203ENST00000359171 SEC63Q9UGP8 760 aaKnown RBP16.81■□□□□ 0.28
NUP98-203ENST00000359171 LRPPRCP42704 1394 aaKnown RBP16.81■□□□□ 0.28
NUP98-203ENST00000359171 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
NUP98-203ENST00000359171 TRIM21P19474 475 aaKnown RBP16.81■□□□□ 0.28
NUP98-203ENST00000359171 PYM1Q9BRP8 204 aaKnown RBP16.81■□□□□ 0.28
NUP98-203ENST00000359171 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
NUP98-203ENST00000359171 IVLP07476 585 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 RPGRIP1LQ68CZ1 1315 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 ANAPC15P60006 121 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 LARP1Q6PKG0 1096 aaKnown RBP16.8■□□□□ 0.28
NUP98-203ENST00000359171 CEP112Q8N8E3 955 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 IGHMBP2P38935 993 aaKnown RBP16.8■□□□□ 0.28
NUP98-203ENST00000359171 GNG11P61952 73 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 DNAAF4Q8WXU2 420 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 SMARCA5O60264 1052 aaPredicted RBP16.8■□□□□ 0.28
NUP98-203ENST00000359171 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 MNAT1P51948 309 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 DNAI2Q9GZS0 605 aa16.8■□□□□ 0.28
NUP98-203ENST00000359171 TXNDC2Q86VQ3 553 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 LRSAM1Q6UWE0 723 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 USP5P45974 858 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 KANK3Q6NY19 840 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 GPATCH11Q8N954 259 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 CCDC12Q8WUD4 166 aaPredicted RBP16.79■□□□□ 0.28
NUP98-203ENST00000359171 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 C20orf194Q5TEA3 1177 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 C6orf163Q5TEZ5 329 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 NAPBQ9H115 298 aa16.79■□□□□ 0.28
NUP98-203ENST00000359171 TNIP1Q15025 636 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 FAM114A1Q8IWE2 563 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 GNAT3A8MTJ3 354 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 MAATS1Q7Z4T9 603 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 AFAP1Q8N556 730 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 CEP63Q96MT8 703 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 SLC52A1Q9NWF4 448 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
NUP98-203ENST00000359171 MTIF2P46199 727 aaKnown RBP16.78■□□□□ 0.28
NUP98-203ENST00000359171 UBE4AQ14139 1066 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 PPM1EQ8WY54 764 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
NUP98-203ENST00000359171 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 RNF41Q9H4P4 317 aaPredicted RBP16.78■□□□□ 0.28
NUP98-203ENST00000359171 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 GJB2P29033 226 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 SLC12A7Q9Y666 1083 aa16.78■□□□□ 0.28
NUP98-203ENST00000359171 CKAP4Q07065 602 aaKnown RBP16.78■□□□□ 0.28
NUP98-203ENST00000359171 DNA2P51530 1060 aa16.77■□□□□ 0.28
NUP98-203ENST00000359171 CCDC194A0A1B0GVG4 234 aa16.77■□□□□ 0.28
NUP98-203ENST00000359171 ZSCAN23Q3MJ62 389 aa16.77■□□□□ 0.28
NUP98-203ENST00000359171 METTL24Q5JXM2 366 aa16.77■□□□□ 0.28
NUP98-203ENST00000359171 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.28
NUP98-203ENST00000359171 MPHOSPH10O00566 681 aaKnown RBP16.77■□□□□ 0.27
NUP98-203ENST00000359171 CFTRP13569 1480 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 HSPA4P34932 840 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 SSRP1Q08945 709 aaKnown RBP16.76■□□□□ 0.27
NUP98-203ENST00000359171 SPATA24Q86W54 205 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 ARFGAP3Q9NP61 516 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 FSD2A1L4K1 749 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 GOLGA8AA7E2F4 631 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 GOLGA8BA8MQT2 603 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 CETN1Q12798 172 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 CTNNBL1Q8WYA6 563 aaPredicted RBP16.76■□□□□ 0.27
NUP98-203ENST00000359171 GDPD2Q9HCC8 539 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 GOLIM4O00461 696 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 GUCY1B3Q02153 619 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 NOLC1Q14978 699 aaKnown RBP eCLIP16.76■□□□□ 0.27
NUP98-203ENST00000359171 CCDC102BQ68D86 513 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
NUP98-203ENST00000359171 NSD3Q9BZ95 1437 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 AMPD3Q01432 767 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 IQCA1Q86XH1 822 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 TMCO5BA8MYB1 307 aa16.76■□□□□ 0.27
NUP98-203ENST00000359171 C9orf84Q5VXU9 1444 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.75■□□□□ 0.27
NUP98-203ENST00000359171 ZNF213O14771 459 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 HSF2BPO75031 334 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 ZSCAN29Q8IWY8 852 aaPredicted RBP16.75■□□□□ 0.27
NUP98-203ENST00000359171 EVI5LQ96CN4 794 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 ABCF2Q9UG63 623 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 ARHGAP5Q13017 1502 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 TBC1D9Q6ZT07 1266 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 BIN1O00499 593 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 ZSCAN16Q9H4T2 348 aaPredicted RBP16.75■□□□□ 0.27
NUP98-203ENST00000359171 TFIP11Q9UBB9 837 aaKnown RBP16.75■□□□□ 0.27
NUP98-203ENST00000359171 CTAGE15A4D2H0 777 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 CTAGE8P0CG41 777 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 HCLS1P14317 486 aaPredicted RBP16.75■□□□□ 0.27
NUP98-203ENST00000359171 CTAGE6Q86UF2 777 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 CTAGE4Q8IX94 777 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 DDX12PQ92771 950 aa16.75■□□□□ 0.27
NUP98-203ENST00000359171 MAP3K12Q12852 859 aa16.74■□□□□ 0.27
NUP98-203ENST00000359171 TOM1L2Q6ZVM7 507 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms