RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 VSIG10Q8N0Z9 540 aa30.79■■■□□ 2.52
CHKA-202ENST00000356135 TNNQ9UQP3 1299 aa30.79■■■□□ 2.52
CHKA-202ENST00000356135 KCNQ4P56696 695 aa30.77■■■□□ 2.52
CHKA-202ENST00000356135 PROSER3Q2NL68 480 aa30.77■■■□□ 2.52
CHKA-202ENST00000356135 CANXP27824 592 aaKnown RBP30.77■■■□□ 2.52
CHKA-202ENST00000356135 ATP6V1AP38606 617 aa30.77■■■□□ 2.52
CHKA-202ENST00000356135 BRPF1P55201 1214 aaPredicted RBP30.77■■■□□ 2.52
CHKA-202ENST00000356135 C20orf194Q5TEA3 1177 aa30.77■■■□□ 2.52
CHKA-202ENST00000356135 PDIA6Q15084 440 aa30.76■■■□□ 2.51
CHKA-202ENST00000356135 A1BGP04217 495 aa30.74■■■□□ 2.51
CHKA-202ENST00000356135 ITPK1Q13572 414 aa30.74■■■□□ 2.51
CHKA-202ENST00000356135 PHAXQ9H814 394 aaKnown RBP30.74■■■□□ 2.51
CHKA-202ENST00000356135 DBF4Q9UBU7 674 aaPredicted RBP30.74■■■□□ 2.51
CHKA-202ENST00000356135 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.74■■■□□ 2.51
CHKA-202ENST00000356135 MYL6BP14649 208 aa30.73■■■□□ 2.51
CHKA-202ENST00000356135 TEX13AQ9BXU3 409 aaPredicted RBP30.73■■■□□ 2.51
CHKA-202ENST00000356135 KIF16BQ96L93 1317 aa30.72■■■□□ 2.51
CHKA-202ENST00000356135 CYP19A1P11511 503 aaPredicted RBP30.71■■■□□ 2.51
CHKA-202ENST00000356135 ZKSCAN2Q63HK3 967 aa30.71■■■□□ 2.51
CHKA-202ENST00000356135 CLUAP1Q96AJ1 413 aa30.71■■■□□ 2.51
CHKA-202ENST00000356135 CHMP4AQ9BY43 222 aa30.71■■■□□ 2.51
CHKA-202ENST00000356135 NBPF26B4DH59 902 aa30.71■■■□□ 2.51
CHKA-202ENST00000356135 NBPF14Q5TI25 921 aa30.71■■■□□ 2.51
CHKA-202ENST00000356135 NBPF10Q6P3W6 841 aaKnown RBP30.71■■■□□ 2.51
CHKA-202ENST00000356135 NBPF15Q8N660 670 aa30.71■■■□□ 2.51
CHKA-202ENST00000356135 DDX21Q9NR30 783 aaKnown RBP eCLIP30.71■■■□□ 2.51
CHKA-202ENST00000356135 LAMB4A4D0S4 1761 aa30.71■■■□□ 2.51
CHKA-202ENST00000356135 TJP1Q07157 1748 aa30.7■■■□□ 2.5
CHKA-202ENST00000356135 STARD3NLO95772 234 aa30.69■■■□□ 2.5
CHKA-202ENST00000356135 TRIM27P14373 513 aa30.69■■■□□ 2.5
CHKA-202ENST00000356135 FLIIQ13045 1269 aa30.69■■■□□ 2.5
CHKA-202ENST00000356135 ATF7IPQ6VMQ6 1270 aa30.69■■■□□ 2.5
CHKA-202ENST00000356135 IPO8O15397 1037 aaKnown RBP30.67■■■□□ 2.5
CHKA-202ENST00000356135 APBA3O96018 575 aa30.67■■■□□ 2.5
CHKA-202ENST00000356135 PANK1Q8TE04 598 aa30.67■■■□□ 2.5
CHKA-202ENST00000356135 CCNL1Q9UK58 526 aaPredicted RBP30.67■■■□□ 2.5
CHKA-202ENST00000356135 RLBP1P12271 317 aa30.66■■■□□ 2.5
CHKA-202ENST00000356135 LRP10Q7Z4F1 713 aa30.66■■■□□ 2.5
CHKA-202ENST00000356135 HYPKQ9NX55 129 aa30.66■■■□□ 2.5
CHKA-202ENST00000356135 AIMP1Q12904 312 aaKnown RBP30.65■■■□□ 2.5
CHKA-202ENST00000356135 LINC00116Q8NCU8 138 aa30.65■■■□□ 2.5
CHKA-202ENST00000356135 ARHGAP45Q92619 1136 aa30.64■■■□□ 2.5
CHKA-202ENST00000356135 FKBP5Q13451 457 aaPredicted RBP30.64■■■□□ 2.49
CHKA-202ENST00000356135 LY75O60449 1722 aa30.63■■■□□ 2.49
CHKA-202ENST00000356135 LRRC4BQ9NT99 713 aa30.63■■■□□ 2.49
CHKA-202ENST00000356135 ZBTB1Q9Y2K1 713 aa30.63■■■□□ 2.49
CHKA-202ENST00000356135 PTPRCP08575 1304 aa30.63■■■□□ 2.49
CHKA-202ENST00000356135 F6X3S4 739 aa30.62■■■□□ 2.49
CHKA-202ENST00000356135 INTS5Q6P9B9 1019 aaKnown RBP30.62■■■□□ 2.49
CHKA-202ENST00000356135 COPS6Q7L5N1 327 aa30.62■■■□□ 2.49
CHKA-202ENST00000356135 DZIP1LQ8IYY4 767 aaKnown RBP30.62■■■□□ 2.49
CHKA-202ENST00000356135 XAGE3Q8WTP9 111 aa30.62■■■□□ 2.49
CHKA-202ENST00000356135 ERBB4Q15303 1308 aa30.62■■■□□ 2.49
CHKA-202ENST00000356135 CRKLP46109 303 aaKnown RBP30.61■■■□□ 2.49
CHKA-202ENST00000356135 PDE3AQ14432 1141 aa30.61■■■□□ 2.49
CHKA-202ENST00000356135 PROM2Q8N271 834 aa30.61■■■□□ 2.49
CHKA-202ENST00000356135 API5Q9BZZ5 524 aaKnown RBP30.61■■■□□ 2.49
CHKA-202ENST00000356135 ZNF330Q9Y3S2 320 aaPredicted RBP30.61■■■□□ 2.49
CHKA-202ENST00000356135 FTSJ3Q8IY81 847 aaKnown RBP30.6■■■□□ 2.49
CHKA-202ENST00000356135 CRBNQ96SW2 442 aa30.6■■■□□ 2.49
CHKA-202ENST00000356135 COG6Q9Y2V7 657 aa30.59■■■□□ 2.49
CHKA-202ENST00000356135 CACNA1FO60840 1977 aa30.59■■■□□ 2.49
CHKA-202ENST00000356135 CCDC87Q9NVE4 849 aa30.59■■■□□ 2.49
CHKA-202ENST00000356135 ZNF831Q5JPB2 1677 aa30.58■■■□□ 2.49
CHKA-202ENST00000356135 TMEM57Q8N5G2 664 aa30.58■■■□□ 2.49
CHKA-202ENST00000356135 PLSCR1O15162 318 aa30.57■■■□□ 2.48
CHKA-202ENST00000356135 TXNRD1Q16881 649 aa30.57■■■□□ 2.48
CHKA-202ENST00000356135 PPP4R2Q9NY27 417 aa30.57■■■□□ 2.48
CHKA-202ENST00000356135 TNS1Q9HBL0 1735 aaKnown RBP30.57■■■□□ 2.48
CHKA-202ENST00000356135 CICQ96RK0 1608 aaPredicted RBP30.57■■■□□ 2.48
CHKA-202ENST00000356135 PI4KAP2A4QPH2 592 aa30.56■■■□□ 2.48
CHKA-202ENST00000356135 TTLL7Q6ZT98 887 aa30.56■■■□□ 2.48
CHKA-202ENST00000356135 PI4KAP1Q8N8J0 262 aa30.56■■■□□ 2.48
CHKA-202ENST00000356135 EXOC6Q8TAG9 804 aa30.56■■■□□ 2.48
CHKA-202ENST00000356135 COL5A3P25940 1745 aaPredicted RBP30.55■■■□□ 2.48
CHKA-202ENST00000356135 ABCC4O15439 1325 aa30.55■■■□□ 2.48
CHKA-202ENST00000356135 SLC4A10Q6U841 1118 aa30.55■■■□□ 2.48
CHKA-202ENST00000356135 SMIM5Q71RC9 77 aa30.54■■■□□ 2.48
CHKA-202ENST00000356135 ADCY9O60503 1353 aa30.54■■■□□ 2.48
CHKA-202ENST00000356135 MYH14Q7Z406 1995 aaKnown RBP30.54■■■□□ 2.48
CHKA-202ENST00000356135 MS4A1P11836 297 aa30.53■■■□□ 2.48
CHKA-202ENST00000356135 SLC27A3Q5K4L6 730 aa30.53■■■□□ 2.48
CHKA-202ENST00000356135 MAP3K2Q9Y2U5 619 aa30.53■■■□□ 2.48
CHKA-202ENST00000356135 IL6STP40189 918 aaPredicted RBP30.52■■■□□ 2.48
CHKA-202ENST00000356135 KSR2Q6VAB6 950 aa30.52■■■□□ 2.48
CHKA-202ENST00000356135 ARXQ96QS3 562 aa30.52■■■□□ 2.48
CHKA-202ENST00000356135 ANKRD13DQ6ZTN6 518 aa30.51■■■□□ 2.48
CHKA-202ENST00000356135 CNTNAP4Q9C0A0 1308 aa30.51■■■□□ 2.47
CHKA-202ENST00000356135 EN1Q05925 392 aaPredicted RBP30.51■■■□□ 2.47
CHKA-202ENST00000356135 RIC3Q7Z5B4 369 aa30.51■■■□□ 2.47
CHKA-202ENST00000356135 ITPRIPQ8IWB1 547 aa30.51■■■□□ 2.47
CHKA-202ENST00000356135 DDX58O95786 925 aaKnown RBP30.5■■■□□ 2.47
CHKA-202ENST00000356135 EIF5P55010 431 aaKnown RBP30.5■■■□□ 2.47
CHKA-202ENST00000356135 MVPQ14764 893 aaKnown RBP30.49■■■□□ 2.47
CHKA-202ENST00000356135 DNAAF4Q8WXU2 420 aa30.49■■■□□ 2.47
CHKA-202ENST00000356135 TAF1LQ8IZX4 1826 aa30.49■■■□□ 2.47
CHKA-202ENST00000356135 EZH2Q15910 746 aaKnown RBP30.49■■■□□ 2.47
CHKA-202ENST00000356135 RC3H1Q5TC82 1133 aaKnown RBP30.49■■■□□ 2.47
CHKA-202ENST00000356135 ZBTB3Q9H5J0 574 aa30.49■■■□□ 2.47
CHKA-202ENST00000356135 AMIGO3Q86WK7 504 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms